| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g07063 | 3:32,014,473-32,017,292 | - | C2H3g09845 | CX3g025306 | LOC_Os03g60520 | Os03g0819700 | - | Detail |
| C1H3g11685 | 3:32,019,701-32,022,527 | + | C2H3g16290 | CX3g026585 | LOC_Os03g60530 | Os03g0819900 | - | Detail |
| C1H3g13391 | 3:32,025,181-32,031,630 | + | C2H3g01855 | CX3g025197 | LOC_Os03g60550 | Os03g0820100 | - | Detail |
| C1H3g31889 | 3:32,039,201-32,042,610 | + | C2H3g30643 | CX3g030735 | LOC_Os03g60580 | Os03g0820500 | OsADF3 | Detail |
| C1H3g18878 | 3:32,043,316-32,045,814 | + | C2H3g14030 | CX3g026527 | LOC_Os03g60580 | Os03g0820600 | - | Detail |
| C1H3g26924 | 3:32,046,708-32,050,021 | - | C2H3g06884 | CX3g029295 | LOC_Os03g60600 | Os03g0820700 | - | Detail |
| C1H3g11416 | 3:32,052,032-32,057,089 | - | C2H3g20559 | CX3g025531 | LOC_Os03g60610 | Os03g0820900 | - | Detail |
| C1H3g28279 | 3:32,059,524-32,064,283 | + | C2H3g05607 | CX3g027512 | LOC_Os03g60620 | Os03g0821100 | - | Detail |
| C1H3g25995 | 3:32,068,691-32,070,247 | + | C2H3g25786 | CX3g030377 | LOC_Os03g60630 | Os03g0821200 | - | Detail |
| C1H3g30691 | 3:32,084,735-32,085,068 | - | C2H3g20031 | CX3g029500 | - | - | - | Detail |
| C1H3g24438 | 3:32,086,709-32,090,299 | - | C2H3g23674 | CX3g027662 | LOC_Os03g60650 | Os03g0821300 | - | Detail |
| C1H3g12541 | 3:32,108,813-32,112,023 | - | C2H3g23136 | CX3g026762 | LOC_Os03g60700 | Os03g0821800 | - | Detail |
| C1H3g00836 | 3:32,115,991-32,120,683 | + | C2H3g16650 | CX3g029390 | LOC_Os03g60710 | Os03g0821900 | - | Detail |
| C1H3g22161 | 3:32,122,108-32,122,716 | - | C2H3g05197 | CX3g028890 | LOC_Os03g60720 | Os03g0822000 | - | Detail |
| C1H3g30466 | 3:32,123,829-32,124,323 | - | C2H3g28970 | CX3g028890 | LOC_Os03g60720 | Os03g0822000 | - | Detail |
| C1H3g30684 | 3:32,140,690-32,142,322 | - | C2H3g26732 | CX3g029250 | LOC_Os03g60740 | Os03g0822200 | - | Detail |
| C1H3g07533 | 3:32,143,169-32,147,768 | + | C2H3g00930 | CX3g030322 | LOC_Os03g60760 | Os03g0822400 | - | Detail |
| C1H3g08406 | 3:32,149,305-32,152,350 | + | C2H3g29253 | CX3g026461 | LOC_Os03g60780 | Os03g0822700 | - | Detail |
| C1H3g13457 | 3:32,152,612-32,154,178 | + | C2H3g29318 | CX3g026368 | LOC_Os03g60790 | Os03g0822800 | - | Detail |
| C1H3g01506 | 3:32,154,729-32,158,967 | + | C2H3g15491 | CX3g025072 | LOC_Os03g60800 | Os03g0822900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g19859 | 3:275,286-276,089 | + | C1H3g27934 | CX3g029495 | LOC_Os03g01650 | Os03g0106900 | - | Detail |
| C2H3g20988 | 3:277,919-278,233 | + | C1H3g20839 | - | - | Os03g0106550 | - | Detail |
| C2H3g21802 | 3:280,755-281,558 | + | C1H3g09448 | CX3g029495 | LOC_Os03g01610 | Os03g0106900 | - | Detail |
| C2H3g24000 | 3:286,286-287,089 | + | C1H3g09211 | CX3g029182 | LOC_Os03g01640 | Os03g0106800 | - | Detail |
| C2H3g29856 | 3:289,474-290,277 | - | C1H3g27934 | CX3g025368 | LOC_Os03g01610 | Os03g0106500 | - | Detail |
| C2H3g18319 | 3:294,137-298,154 | - | C1H3g02983 | CX3g030834 | LOC_Os03g01660 | Os03g0107000 | - | Detail |
| C2H3g12781 | 3:299,902-301,883 | + | C1H3g17953 | CX3g025562 | LOC_Os03g01670 | Os03g0107100 | - | Detail |
| C2H3g12928 | 3:301,892-306,733 | + | C1H3g31596 | CX3g025562 | LOC_Os03g01670 | Os03g0107100 | - | Detail |
| C2H3g02258 | 3:309,231-310,675 | - | C1H3g21747 | CX3g026726 | LOC_Os03g01700 | Os03g0107300 | LSI2, Lsi2, SIET1, OsLsi2 | Detail |
| C2H3g07101 | 3:317,398-325,316 | + | C1H3g27800 | CX3g025905 | LOC_Os03g01710 | Os03g0107400 | - | Detail |
| C2H3g28769 | 3:329,534-336,123 | + | C1H3g21135 | CX3g028047 | LOC_Os03g01720 | Os03g0107500 | - | Detail |
| C2H3g30259 | 3:338,145-339,134 | + | C1H3g09738 | CX3g029882 | LOC_Os03g01730 | Os03g0107600 | - | Detail |
| C2H3g13144 | 3:342,381-342,698 | + | C1H3g00509 | CX10g008515 | LOC_Os03g01740 | Os03g0107700 | - | Detail |
| C2H3g20378 | 3:343,714-348,648 | - | C1H3g25096 | CX3g029326 | LOC_Os03g01750 | Os03g0107800 | - | Detail |
| C2H3g26807 | 3:351,610-353,831 | + | C1H3g17188 | CX3g028603 | LOC_Os03g01760 | Os03g0107900 | - | Detail |
| C2H3g26003 | 3:355,485-356,808 | - | C1H3g00848 | CX3g030389 | LOC_Os03g01770 | Os03g0108000 | ACR2.2, CDC25.2, OsACR2.2, OsStr21, STR21 | Detail |
| C2H3g13800 | 3:357,667-358,714 | + | C1H3g19790 | CX3g028464 | LOC_Os03g01780 | Os03g0108200 | - | Detail |
| C2H3g05829 | 3:359,984-364,409 | + | C1H3g19790 | CX3g028464 | LOC_Os03g01790 | Os03g0108200 | - | Detail |
| C2H3g04954 | 3:364,453-365,755 | - | C1H3g27345 | CX3g028491 | LOC_Os03g01800 | Os03g0108300 | OsXTH19 | Detail |
| C2H3g18698 | 3:369,393-370,937 | + | C1H3g11796 | CX3g027775 | LOC_Os03g01810 | Os03g0108400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |