| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g19079 | 3:31,709,742-31,710,784 | - | C2H3g05006 | CX3g025408 | LOC_Os03g59720 | Os03g0811800 | - | Detail |
| C1H3g19228 | 3:31,745,476-31,759,310 | - | C2H3g19593 | CX3g028422 | - | Os03g0812000 | - | Detail |
| C1H3g24075 | 3:31,765,163-31,767,619 | + | C2H3g16505 | CX3g025855 | LOC_Os03g59760 | Os03g0812200 | - | Detail |
| C1H3g29140 | 3:31,782,306-31,782,722 | - | - | - | - | - | - | Detail |
| C1H3g23671 | 3:31,787,654-31,790,831 | - | C2H3g09561 | CX3g025448 | LOC_Os03g59840 | Os03g0813200 | - | Detail |
| C1H3g23594 | 3:31,805,054-31,806,130 | + | C2H3g11227 | CX3g030353 | LOC_Os03g60080 | Os03g0815100 | OsNAC19, SNAC1 | Detail |
| C1H3g00328 | 3:31,807,003-31,813,191 | - | C2H3g24873 | CX3g029581 | LOC_Os03g60090 | Os03g0815200 | - | Detail |
| C1H3g20553 | 3:31,814,250-31,814,633 | - | C2H3g26221 | - | - | Os03g0815332 | - | Detail |
| C1H3g20794 | 3:31,814,302-31,815,644 | + | C2H3g04086 | CX3g025237 | LOC_Os03g60100 | Os03g0815400 | - | Detail |
| C1H3g22427 | 3:31,822,439-31,826,090 | + | C2H3g14885 | CX3g029363 | LOC_Os03g60110 | Os03g0815700 | Spin1, SPIN1 | Detail |
| C1H3g09437 | 3:31,828,607-31,829,353 | - | C2H3g05216 | CX3g030003 | LOC_Os03g60120 | Os03g0815800 | - | Detail |
| C1H3g16381 | 3:31,831,314-31,834,037 | - | C2H3g17896 | CX3g030342 | LOC_Os03g60130 | Os03g0815900 | - | Detail |
| C1H3g12909 | 3:31,837,074-31,838,284 | - | C2H3g03956 | CX3g025316 | LOC_Os03g60140 | Os03g0816000 | - | Detail |
| C1H3g09858 | 3:31,838,927-31,842,804 | - | C2H3g08821 | CX3g030622 | LOC_Os03g60150 | Os03g0816100 | - | Detail |
| C1H3g10675 | 3:31,849,495-31,851,106 | + | C2H3g29247 | - | - | Os03g0816200 | - | Detail |
| C1H3g28154 | 3:31,854,366-31,859,983 | - | C2H3g28963 | CX3g027879 | LOC_Os03g60170 | Os03g0816300 | - | Detail |
| C1H3g21278 | 3:31,861,583-31,866,220 | - | C2H3g10484 | CX3g027734 | LOC_Os03g60180 | Os03g0816400 | - | Detail |
| C1H3g16235 | 3:31,869,959-31,875,204 | + | C2H3g29652 | CX3g029573 | LOC_Os03g60200 | Os03g0816600 | - | Detail |
| C1H3g01566 | 3:31,876,781-31,877,895 | - | C2H3g04502 | CX3g031210 | LOC_Os03g60210 | Os03g0816700 | - | Detail |
| C1H3g01354 | 3:31,879,282-31,880,081 | - | C2H3g09881 | CX3g029902 | LOC_Os03g60220 | Os03g0816800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g16107 | 1:26,877,111-26,880,110 | - | C1H1g17968 | CX1g001570 | LOC_Os01g52470 | Os01g0723000 | - | Detail |
| C2H1g09375 | 1:26,882,026-26,882,896 | + | C1H1g22223 | CX1g004088 | LOC_Os01g52480 | Os01g0723100 | - | Detail |
| C2H1g00796 | 1:26,882,953-26,883,725 | + | C1H1g00329 | CX1g004088 | LOC_Os01g52480 | Os01g0723100 | - | Detail |
| C2H1g00282 | 1:26,884,505-26,885,983 | - | C1H1g27397 | CX1g004240 | LOC_Os01g52490 | Os01g0723200 | - | Detail |
| C2H1g06743 | 1:26,887,323-26,887,562 | + | - | - | - | - | - | Detail |
| C2H1g25823 | 1:26,891,960-26,897,546 | + | C1H1g18013 | CX1g001850 | LOC_Os01g52500 | Os01g0723400 | NADP-ME2, Os-NADP-ME2, Os-NADP-ME2-2 | Detail |
| C2H1g08871 | 1:26,899,226-26,904,874 | + | C1H1g17264 | CX1g003519 | LOC_Os01g52514 | Os01g0723500 | - | Detail |
| C2H1g17638 | 1:26,906,473-26,910,296 | + | C1H1g03740 | CX1g004209 | LOC_Os01g52530 | Os01g0723600 | - | Detail |
| C2H1g22241 | 1:26,911,959-26,915,873 | + | C1H1g09315 | CX1g004680 | LOC_Os01g52540 | Os01g0723700 | - | Detail |
| C2H1g23039 | 1:26,916,086-26,922,499 | - | C1H1g17060 | CX1g004575 | LOC_Os01g52550 | Os01g0723800 | - | Detail |
| C2H1g05862 | 1:26,945,289-26,954,596 | + | C1H1g18463 | CX1g004747 | LOC_Os01g52560 | Os01g0724500 | - | Detail |
| C2H1g26023 | 1:26,963,696-26,967,362 | + | C1H1g09116 | CX1g002347 | LOC_Os01g52610 | Os01g0725400 | - | Detail |
| C2H1g19762 | 1:26,967,539-26,970,805 | + | C1H1g01881 | CX1g003740 | LOC_Os01g52630 | Os01g0725600 | - | Detail |
| C2H1g12468 | 1:26,977,834-26,982,933 | + | C1H1g28016 | CX1g000922 | LOC_Os01g52640 | Os01g0725800 | - | Detail |
| C2H1g25269 | 1:26,983,273-26,983,872 | - | C1H1g01009 | CX1g004829 | LOC_Os01g52650 | Os01g0725900 | - | Detail |
| C2H1g28455 | 1:26,986,686-26,987,415 | - | C1H1g26602 | CX1g001737 | LOC_Os01g52660 | Os01g0726100 | - | Detail |
| C2H1g28242 | 1:26,992,339-26,994,742 | - | C1H1g07505 | CX1g000027 | LOC_Os01g52680 | Os01g0726400 | MADS32, OsMADS32, CFO1, CFO1/OsMADS32, TRI1 | Detail |
| C2H1g03941 | 1:27,006,049-27,008,651 | + | C1H1g17040 | CX1g007145 | LOC_Os01g52690 | Os01g0726700 | - | Detail |
| C2H1g23381 | 1:27,016,197-27,020,469 | + | C1H1g01057 | CX1g003909 | LOC_Os01g52710 | Os01g0727100 | - | Detail |
| C2H1g19647 | 1:27,024,411-27,027,091 | + | C1H1g19246 | CX1g005872 | LOC_Os01g52720 | Os01g0727400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |