| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g19079 | 3:31,709,742-31,710,784 | - | C2H3g05006 | CX3g025408 | LOC_Os03g59720 | Os03g0811800 | - | Detail |
| C1H3g19228 | 3:31,745,476-31,759,310 | - | C2H3g19593 | CX3g028422 | - | Os03g0812000 | - | Detail |
| C1H3g24075 | 3:31,765,163-31,767,619 | + | C2H3g16505 | CX3g025855 | LOC_Os03g59760 | Os03g0812200 | - | Detail |
| C1H3g29140 | 3:31,782,306-31,782,722 | - | - | - | - | - | - | Detail |
| C1H3g23671 | 3:31,787,654-31,790,831 | - | C2H3g09561 | CX3g025448 | LOC_Os03g59840 | Os03g0813200 | - | Detail |
| C1H3g23594 | 3:31,805,054-31,806,130 | + | C2H3g11227 | CX3g030353 | LOC_Os03g60080 | Os03g0815100 | OsNAC19, SNAC1 | Detail |
| C1H3g00328 | 3:31,807,003-31,813,191 | - | C2H3g24873 | CX3g029581 | LOC_Os03g60090 | Os03g0815200 | - | Detail |
| C1H3g20553 | 3:31,814,250-31,814,633 | - | C2H3g26221 | - | - | Os03g0815332 | - | Detail |
| C1H3g20794 | 3:31,814,302-31,815,644 | + | C2H3g04086 | CX3g025237 | LOC_Os03g60100 | Os03g0815400 | - | Detail |
| C1H3g22427 | 3:31,822,439-31,826,090 | + | C2H3g14885 | CX3g029363 | LOC_Os03g60110 | Os03g0815700 | Spin1, SPIN1 | Detail |
| C1H3g09437 | 3:31,828,607-31,829,353 | - | C2H3g05216 | CX3g030003 | LOC_Os03g60120 | Os03g0815800 | - | Detail |
| C1H3g16381 | 3:31,831,314-31,834,037 | - | C2H3g17896 | CX3g030342 | LOC_Os03g60130 | Os03g0815900 | - | Detail |
| C1H3g12909 | 3:31,837,074-31,838,284 | - | C2H3g03956 | CX3g025316 | LOC_Os03g60140 | Os03g0816000 | - | Detail |
| C1H3g09858 | 3:31,838,927-31,842,804 | - | C2H3g08821 | CX3g030622 | LOC_Os03g60150 | Os03g0816100 | - | Detail |
| C1H3g10675 | 3:31,849,495-31,851,106 | + | C2H3g29247 | - | - | Os03g0816200 | - | Detail |
| C1H3g28154 | 3:31,854,366-31,859,983 | - | C2H3g28963 | CX3g027879 | LOC_Os03g60170 | Os03g0816300 | - | Detail |
| C1H3g21278 | 3:31,861,583-31,866,220 | - | C2H3g10484 | CX3g027734 | LOC_Os03g60180 | Os03g0816400 | - | Detail |
| C1H3g16235 | 3:31,869,959-31,875,204 | + | C2H3g29652 | CX3g029573 | LOC_Os03g60200 | Os03g0816600 | - | Detail |
| C1H3g01566 | 3:31,876,781-31,877,895 | - | C2H3g04502 | CX3g031210 | LOC_Os03g60210 | Os03g0816700 | - | Detail |
| C1H3g01354 | 3:31,879,282-31,880,081 | - | C2H3g09881 | CX3g029902 | LOC_Os03g60220 | Os03g0816800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g16936 | 6:26,305,257-26,309,460 | + | C1H6g07579 | CX6g044738 | LOC_Os06g49230 | Os06g0706400 | OsPTR9 | Detail |
| C2H6g07496 | 6:26,318,632-26,320,509 | - | C1H6g14791 | CX6g045701 | LOC_Os06g49300 | Os06g0707000 | XYXT1 | Detail |
| C2H6g02584 | 6:26,323,425-26,330,572 | + | C1H6g07781 | CX6g042851 | LOC_Os06g49310 | Os06g0707100 | - | Detail |
| C2H6g28355 | 6:26,330,394-26,332,385 | - | C1H6g30332 | CX6g044744 | LOC_Os06g49320 | Os06g0707200 | OsXAT4 | Detail |
| C2H6g09646 | 6:26,340,773-26,345,257 | - | C1H6g20503 | CX6g043432 | LOC_Os06g49360 | Os06g0707350 | - | Detail |
| C2H6g02972 | 6:26,358,873-26,363,396 | - | C1H6g28599 | CX6g043180 | LOC_Os06g49390 | Os06g0707733 | - | Detail |
| C2H6g12364 | 6:26,373,194-26,381,115 | - | C1H6g28599 | CX6g043432 | LOC_Os06g49420 | Os06g0707700 | - | Detail |
| C2H6g06456 | 6:26,381,954-26,383,389 | - | C1H6g18704 | - | - | - | - | Detail |
| C2H6g06263 | 6:26,385,335-26,390,272 | + | C1H6g17358 | CX6g042732 | LOC_Os06g49430 | Os06g0708000 | BWMK1, OsBWMK1M | Detail |
| C2H6g00786 | 6:26,391,339-26,397,254 | - | C1H6g07108 | CX6g043918 | LOC_Os06g49440 | Os06g0708100 | - | Detail |
| C2H6g22817 | 6:26,397,559-26,403,996 | + | C1H6g25506 | CX6g041443 | LOC_Os06g49450 | Os06g0708200 | OsMTOPVIB | Detail |
| C2H6g13876 | 6:26,404,653-26,406,561 | + | C1H6g16157 | CX6g042713 | LOC_Os06g49460 | Os06g0708300 | - | Detail |
| C2H6g01779 | 6:26,407,653-26,409,481 | + | C1H6g26774 | CX6g043935 | LOC_Os06g49470 | Os06g0708400 | CYP19-4, OsCYP19-4, OsCYP-16, OsCYP19-3 | Detail |
| C2H6g06908 | 6:26,410,614-26,413,172 | + | C1H6g04243 | CX6g042472 | LOC_Os06g49480 | Os06g0708500 | - | Detail |
| C2H6g01327 | 6:26,415,715-26,418,824 | - | C1H6g00335 | CX6g043514 | LOC_Os06g49500 | Os06g0708700 | - | Detail |
| C2H6g14145 | 6:26,425,696-26,431,947 | - | C1H6g23362 | CX6g044369 | LOC_Os06g49505 | Os06g0708832 | - | Detail |
| C2H6g21552 | 6:26,432,605-26,433,753 | + | C1H6g28139 | CX6g045386 | LOC_Os06g49520 | Os06g0709000 | - | Detail |
| C2H6g27299 | 6:26,434,434-26,437,295 | + | C1H6g23498 | CX6g043825 | LOC_Os06g49530 | Os06g0709100 | - | Detail |
| C2H6g19038 | 6:26,437,837-26,440,071 | - | C1H6g20666 | CX6g044020 | LOC_Os06g49550 | Os06g0597800 | - | Detail |
| C2H6g21852 | 6:26,450,253-26,451,402 | - | C1H6g12428 | CX6g041405 | LOC_Os06g49640 | Os06g0710300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |