| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g21680 | 3:31,573,549-31,577,267 | - | C2H3g29438 | CX3g025915 | LOC_Os03g59450 | Os03g0809100 | - | Detail |
| C1H3g00029 | 3:31,578,427-31,580,804 | + | C2H3g20629 | CX3g029386 | LOC_Os03g59460 | Os03g0809200 | - | Detail |
| C1H3g24410 | 3:31,581,594-31,585,210 | - | C2H3g29142 | CX3g030061 | LOC_Os03g59470 | Os03g0809300 | - | Detail |
| C1H3g00154 | 3:31,585,689-31,590,452 | - | C2H3g26798 | CX3g026207 | LOC_Os03g59480 | Os03g0809400 | - | Detail |
| C1H3g24704 | 3:31,595,581-31,600,379 | + | C2H3g14868 | CX3g029129 | LOC_Os03g59530 | Os03g0809700 | - | Detail |
| C1H3g10761 | 3:31,601,003-31,602,117 | - | C2H3g12384 | CX3g029771 | LOC_Os03g59540 | Os03g0809800 | - | Detail |
| C1H3g08226 | 3:31,603,634-31,608,354 | + | C2H3g15000 | CX3g027672 | LOC_Os03g59550 | Os03g0809900 | OsY14b, Y14b, Tsunagi, RBM8 | Detail |
| C1H3g24094 | 3:31,614,612-31,615,670 | + | C2H3g26577 | CX3g030604 | LOC_Os03g59570 | Os03g0810100 | - | Detail |
| C1H3g21092 | 3:31,627,097-31,629,523 | - | C2H3g13200 | CX3g027297 | LOC_Os03g59580 | Os03g0810300 | - | Detail |
| C1H3g11302 | 3:31,636,858-31,642,955 | - | C2H3g12399 | CX3g028362 | LOC_Os03g59590 | Os03g0810600 | - | Detail |
| C1H3g11617 | 3:31,650,667-31,652,531 | - | C2H3g16986 | CX3g030481 | LOC_Os03g59600 | Os03g0810700 | - | Detail |
| C1H3g30674 | 3:31,653,404-31,655,322 | + | C2H3g19706 | CX3g028870 | LOC_Os03g59610 | Os03g0810800 | OsABA2 | Detail |
| C1H3g01412 | 3:31,655,676-31,660,165 | - | C2H3g30149 | CX3g027301 | LOC_Os03g59620 | Os03g0810900 | - | Detail |
| C1H3g18901 | 3:31,662,066-31,668,698 | + | C2H3g14154 | CX3g030819 | LOC_Os03g59640 | Os03g0811100 | - | Detail |
| C1H3g26787 | 3:31,669,197-31,674,200 | + | C2H3g24154 | CX3g031200 | LOC_Os03g59650 | Os03g0811200 | - | Detail |
| C1H3g09735 | 3:31,677,228-31,679,230 | + | C2H3g07522 | CX3g028699 | LOC_Os03g59660 | Os03g0811300 | - | Detail |
| C1H3g09793 | 3:31,681,847-31,683,197 | + | C2H3g08986 | CX3g027906 | LOC_Os03g59670 | Os03g0811400 | - | Detail |
| C1H3g28609 | 3:31,694,355-31,698,287 | - | C2H3g03566 | CX3g026137 | LOC_Os03g59680 | Os03g0811500 | - | Detail |
| C1H3g20712 | 3:31,702,998-31,703,927 | - | C2H3g09547 | CX3g028706 | LOC_Os03g59690 | Os03g0811550 | - | Detail |
| C1H3g19969 | 3:31,704,308-31,707,244 | - | C2H3g28941 | CX3g027737 | LOC_Os03g59700 | Os03g0811600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g26120 | 2:31,732,482-31,738,413 | - | C1H2g24252 | CX2g020572 | LOC_Os02g56910 | Os02g0814100 | - | Detail |
| C2H2g25119 | 2:31,739,645-31,743,588 | - | C1H2g00197 | CX2g021462 | LOC_Os02g56920 | Os02g0814200 | - | Detail |
| C2H2g25443 | 2:31,752,727-31,753,642 | + | C1H2g08877 | CX2g024136 | LOC_Os02g56930 | Os02g0814300 | - | Detail |
| C2H2g04755 | 2:31,754,280-31,755,312 | + | C1H2g06396 | CX2g020504 | LOC_Os02g56930 | Os02g0814400 | - | Detail |
| C2H2g08517 | 2:31,755,473-31,763,697 | - | C1H2g30069 | CX2g019885 | LOC_Os02g56950 | Os02g0814600 | - | Detail |
| C2H2g29032 | 2:31,763,920-31,766,230 | + | C1H2g21335 | CX2g021150 | LOC_Os02g56960 | Os02g0814700 | - | Detail |
| C2H2g02153 | 2:31,766,580-31,768,220 | + | C1H2g00908 | CX2g024145 | LOC_Os02g56970 | Os02g0814800 | - | Detail |
| C2H2g27400 | 2:31,769,012-31,770,691 | - | C1H2g04378 | CX2g024207 | LOC_Os02g56980 | Os02g0814900 | - | Detail |
| C2H2g00106 | 2:31,771,101-31,772,757 | + | C1H2g01690 | CX2g024648 | LOC_Os02g56990 | Os02g0815000 | - | Detail |
| C2H2g02955 | 2:31,773,618-31,774,490 | + | - | CX2g022315 | LOC_Os02g57000 | Os02g0815100 | - | Detail |
| C2H2g12010 | 2:31,775,257-31,777,293 | + | C1H2g02311 | CX2g020501 | LOC_Os02g57010 | Os02g0815200 | - | Detail |
| C2H2g10192 | 2:31,778,612-31,779,091 | + | - | CX2g020531 | LOC_Os02g57020 | Os02g0815300 | - | Detail |
| C2H2g29850 | 2:31,779,738-31,786,564 | + | C1H2g18752 | CX2g021551 | LOC_Os02g57040 | Os02g0815500 | OsGSNOR | Detail |
| C2H2g13381 | 2:31,786,864-31,789,290 | - | C1H2g18890 | CX2g020492 | LOC_Os02g57050 | Os02g0815600 | - | Detail |
| C2H2g10860 | 2:31,789,578-31,793,385 | + | C1H2g08291 | CX2g022327 | LOC_Os02g57060 | Os02g0815700 | - | Detail |
| C2H2g29075 | 2:31,794,253-31,796,227 | - | C1H2g23298 | CX2g023277 | LOC_Os02g57070 | Os02g0815800 | - | Detail |
| C2H2g12744 | 2:31,796,959-31,803,920 | - | C1H2g23463 | CX2g018827 | LOC_Os02g57080 | Os02g0815900 | - | Detail |
| C2H2g27544 | 2:31,803,474-31,803,764 | + | C1H2g02320 | - | - | - | - | Detail |
| C2H2g16853 | 2:31,810,374-31,813,376 | + | C1H2g29993 | CX2g021299 | LOC_Os02g57090 | Os02g0816000 | - | Detail |
| C2H2g17053 | 2:31,816,300-31,818,782 | - | C1H2g12719 | CX2g022535 | LOC_Os02g57100 | Os02g0816100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |