| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g21680 | 3:31,573,549-31,577,267 | - | C2H3g29438 | CX3g025915 | LOC_Os03g59450 | Os03g0809100 | - | Detail |
| C1H3g00029 | 3:31,578,427-31,580,804 | + | C2H3g20629 | CX3g029386 | LOC_Os03g59460 | Os03g0809200 | - | Detail |
| C1H3g24410 | 3:31,581,594-31,585,210 | - | C2H3g29142 | CX3g030061 | LOC_Os03g59470 | Os03g0809300 | - | Detail |
| C1H3g00154 | 3:31,585,689-31,590,452 | - | C2H3g26798 | CX3g026207 | LOC_Os03g59480 | Os03g0809400 | - | Detail |
| C1H3g24704 | 3:31,595,581-31,600,379 | + | C2H3g14868 | CX3g029129 | LOC_Os03g59530 | Os03g0809700 | - | Detail |
| C1H3g10761 | 3:31,601,003-31,602,117 | - | C2H3g12384 | CX3g029771 | LOC_Os03g59540 | Os03g0809800 | - | Detail |
| C1H3g08226 | 3:31,603,634-31,608,354 | + | C2H3g15000 | CX3g027672 | LOC_Os03g59550 | Os03g0809900 | OsY14b, Y14b, Tsunagi, RBM8 | Detail |
| C1H3g24094 | 3:31,614,612-31,615,670 | + | C2H3g26577 | CX3g030604 | LOC_Os03g59570 | Os03g0810100 | - | Detail |
| C1H3g21092 | 3:31,627,097-31,629,523 | - | C2H3g13200 | CX3g027297 | LOC_Os03g59580 | Os03g0810300 | - | Detail |
| C1H3g11302 | 3:31,636,858-31,642,955 | - | C2H3g12399 | CX3g028362 | LOC_Os03g59590 | Os03g0810600 | - | Detail |
| C1H3g11617 | 3:31,650,667-31,652,531 | - | C2H3g16986 | CX3g030481 | LOC_Os03g59600 | Os03g0810700 | - | Detail |
| C1H3g30674 | 3:31,653,404-31,655,322 | + | C2H3g19706 | CX3g028870 | LOC_Os03g59610 | Os03g0810800 | OsABA2 | Detail |
| C1H3g01412 | 3:31,655,676-31,660,165 | - | C2H3g30149 | CX3g027301 | LOC_Os03g59620 | Os03g0810900 | - | Detail |
| C1H3g18901 | 3:31,662,066-31,668,698 | + | C2H3g14154 | CX3g030819 | LOC_Os03g59640 | Os03g0811100 | - | Detail |
| C1H3g26787 | 3:31,669,197-31,674,200 | + | C2H3g24154 | CX3g031200 | LOC_Os03g59650 | Os03g0811200 | - | Detail |
| C1H3g09735 | 3:31,677,228-31,679,230 | + | C2H3g07522 | CX3g028699 | LOC_Os03g59660 | Os03g0811300 | - | Detail |
| C1H3g09793 | 3:31,681,847-31,683,197 | + | C2H3g08986 | CX3g027906 | LOC_Os03g59670 | Os03g0811400 | - | Detail |
| C1H3g28609 | 3:31,694,355-31,698,287 | - | C2H3g03566 | CX3g026137 | LOC_Os03g59680 | Os03g0811500 | - | Detail |
| C1H3g20712 | 3:31,702,998-31,703,927 | - | C2H3g09547 | CX3g028706 | LOC_Os03g59690 | Os03g0811550 | - | Detail |
| C1H3g19969 | 3:31,704,308-31,707,244 | - | C2H3g28941 | CX3g027737 | LOC_Os03g59700 | Os03g0811600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g07009 | 1:543,325-548,130 | + | C1H1g25488 | CX1g001513 | LOC_Os01g02090 | Os01g0111200 | - | Detail |
| C2H1g01628 | 1:550,226-551,621 | + | C1H1g01853 | CX1g006966 | - | Os01g0875300 | - | Detail |
| C2H1g24854 | 1:552,255-555,466 | + | C1H1g07786 | CX1g005226 | LOC_Os01g02100 | Os01g0111400 | - | Detail |
| C2H1g19363 | 1:558,023-559,763 | - | C1H1g14088 | CX1g006677 | LOC_Os01g02110 | Os01g0111500 | OsbHLH125, OsRSL1 | Detail |
| C2H1g23948 | 1:568,570-569,710 | + | C1H1g13355 | CX1g005285 | LOC_Os01g02120 | Os01g0111600 | OsMFT2 | Detail |
| C2H1g02582 | 1:570,950-571,168 | + | C1H1g13355 | CX1g005285 | LOC_Os01g02120 | Os01g0111600 | OsMFT2 | Detail |
| C2H1g06750 | 1:572,804-573,340 | - | C1H1g03145 | CX1g000577 | LOC_Os01g02130 | Os01g0111700 | - | Detail |
| C2H1g00548 | 1:576,022-576,357 | + | - | CX1g001204 | LOC_Os01g02139 | Os01g0111800 | - | Detail |
| C2H1g11220 | 1:578,071-578,604 | + | - | CX1g000849 | LOC_Os01g02150 | Os01g0111900 | - | Detail |
| C2H1g25662 | 1:583,706-584,185 | + | - | CX1g005472 | LOC_Os01g02160 | Os01g0112000 | - | Detail |
| C2H1g01302 | 1:589,317-590,438 | - | - | CX1g003752 | LOC_Os01g02170 | Os01g0112100 | - | Detail |
| C2H1g15413 | 1:592,366-595,545 | - | C1H1g19396 | CX1g001772 | LOC_Os01g02180 | Os01g0112300 | - | Detail |
| C2H1g26496 | 1:597,481-598,215 | - | C1H1g12611 | CX1g006294 | LOC_Os01g02190 | Os01g0112400 | - | Detail |
| C2H1g09983 | 1:600,015-603,239 | - | C1H1g15658 | CX1g004936 | LOC_Os01g02200 | Os01g0112500 | - | Detail |
| C2H1g08042 | 1:624,169-628,443 | + | C1H1g24472 | CX1g000403 | LOC_Os01g02250 | Os01g0113150 | - | Detail |
| C2H1g24768 | 1:632,904-635,347 | - | C1H1g25870 | CX1g004864 | LOC_Os01g02290 | Os01g0117100 | - | Detail |
| C2H1g21388 | 1:635,800-637,941 | + | C1H1g08806 | CX1g000582 | LOC_Os01g02300 | Os01g0113300 | - | Detail |
| C2H1g20203 | 1:641,135-643,093 | + | C1H1g10377 | CX1g004500 | LOC_Os01g02310 | Os01g0113350 | MAK1 | Detail |
| C2H1g18634 | 1:643,440-645,870 | - | C1H1g04178 | CX1g000582 | LOC_Os01g02320 | Os01g0113400 | - | Detail |
| C2H1g13637 | 1:645,439-645,711 | + | - | - | - | Os01g0113450 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |