| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g21680 | 3:31,573,549-31,577,267 | - | C2H3g29438 | CX3g025915 | LOC_Os03g59450 | Os03g0809100 | - | Detail |
| C1H3g00029 | 3:31,578,427-31,580,804 | + | C2H3g20629 | CX3g029386 | LOC_Os03g59460 | Os03g0809200 | - | Detail |
| C1H3g24410 | 3:31,581,594-31,585,210 | - | C2H3g29142 | CX3g030061 | LOC_Os03g59470 | Os03g0809300 | - | Detail |
| C1H3g00154 | 3:31,585,689-31,590,452 | - | C2H3g26798 | CX3g026207 | LOC_Os03g59480 | Os03g0809400 | - | Detail |
| C1H3g24704 | 3:31,595,581-31,600,379 | + | C2H3g14868 | CX3g029129 | LOC_Os03g59530 | Os03g0809700 | - | Detail |
| C1H3g10761 | 3:31,601,003-31,602,117 | - | C2H3g12384 | CX3g029771 | LOC_Os03g59540 | Os03g0809800 | - | Detail |
| C1H3g08226 | 3:31,603,634-31,608,354 | + | C2H3g15000 | CX3g027672 | LOC_Os03g59550 | Os03g0809900 | OsY14b, Y14b, Tsunagi, RBM8 | Detail |
| C1H3g24094 | 3:31,614,612-31,615,670 | + | C2H3g26577 | CX3g030604 | LOC_Os03g59570 | Os03g0810100 | - | Detail |
| C1H3g21092 | 3:31,627,097-31,629,523 | - | C2H3g13200 | CX3g027297 | LOC_Os03g59580 | Os03g0810300 | - | Detail |
| C1H3g11302 | 3:31,636,858-31,642,955 | - | C2H3g12399 | CX3g028362 | LOC_Os03g59590 | Os03g0810600 | - | Detail |
| C1H3g11617 | 3:31,650,667-31,652,531 | - | C2H3g16986 | CX3g030481 | LOC_Os03g59600 | Os03g0810700 | - | Detail |
| C1H3g30674 | 3:31,653,404-31,655,322 | + | C2H3g19706 | CX3g028870 | LOC_Os03g59610 | Os03g0810800 | OsABA2 | Detail |
| C1H3g01412 | 3:31,655,676-31,660,165 | - | C2H3g30149 | CX3g027301 | LOC_Os03g59620 | Os03g0810900 | - | Detail |
| C1H3g18901 | 3:31,662,066-31,668,698 | + | C2H3g14154 | CX3g030819 | LOC_Os03g59640 | Os03g0811100 | - | Detail |
| C1H3g26787 | 3:31,669,197-31,674,200 | + | C2H3g24154 | CX3g031200 | LOC_Os03g59650 | Os03g0811200 | - | Detail |
| C1H3g09735 | 3:31,677,228-31,679,230 | + | C2H3g07522 | CX3g028699 | LOC_Os03g59660 | Os03g0811300 | - | Detail |
| C1H3g09793 | 3:31,681,847-31,683,197 | + | C2H3g08986 | CX3g027906 | LOC_Os03g59670 | Os03g0811400 | - | Detail |
| C1H3g28609 | 3:31,694,355-31,698,287 | - | C2H3g03566 | CX3g026137 | LOC_Os03g59680 | Os03g0811500 | - | Detail |
| C1H3g20712 | 3:31,702,998-31,703,927 | - | C2H3g09547 | CX3g028706 | LOC_Os03g59690 | Os03g0811550 | - | Detail |
| C1H3g19969 | 3:31,704,308-31,707,244 | - | C2H3g28941 | CX3g027737 | LOC_Os03g59700 | Os03g0811600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H8g08835 | 8:1,475,387-1,477,185 | - | C1H8g16322 | CX8g052434 | LOC_Os08g03620 | Os08g0130300 | - | Detail |
| C2H8g22855 | 8:1,478,290-1,481,787 | - | C1H8g09516 | CX8g051422 | LOC_Os08g03630 | Os08g0130400 | - | Detail |
| C2H8g04003 | 8:1,482,266-1,484,972 | - | C1H8g20163 | CX8g051887 | LOC_Os08g03640 | Os08g0130500 | - | Detail |
| C2H8g02162 | 8:1,485,596-1,491,581 | - | C1H8g30778 | CX8g053474 | LOC_Os08g03650 | Os08g0130600 | - | Detail |
| C2H8g20997 | 8:1,497,531-1,501,588 | + | C1H8g13806 | CX8g050739 | LOC_Os08g03670 | Os08g0130900 | - | Detail |
| C2H8g29969 | 8:1,502,534-1,508,370 | + | C1H8g11402 | CX8g052119 | LOC_Os08g03682 | Os08g0131100 | CYP703A3 | Detail |
| C2H8g27823 | 8:1,508,899-1,509,255 | + | C1H8g01628 | CX8g050510 | LOC_Os08g03690 | - | - | Detail |
| C2H8g20111 | 8:1,515,197-1,516,986 | - | C1H8g29512 | CX8g052592 | LOC_Os08g03770 | Os08g0132000 | - | Detail |
| C2H8g25480 | 8:1,517,763-1,518,879 | + | C1H8g27860 | CX8g052120 | LOC_Os08g03780 | Os08g0132100 | - | Detail |
| C2H8g03739 | 8:1,522,875-1,525,082 | + | C1H8g09720 | CX8g052120 | LOC_Os08g04100 | Os08g0132600 | - | Detail |
| C2H8g20468 | 8:1,530,085-1,530,342 | + | C1H8g27607 | - | - | - | - | Detail |
| C2H8g19528 | 8:1,532,669-1,534,308 | + | C1H8g00691 | - | - | - | - | Detail |
| C2H8g13927 | 8:1,538,236-1,538,583 | - | C1H8g24893 | CX8g053264 | LOC_Os08g03820 | Os08g0132300 | OsRIP1, Dms1 | Detail |
| C2H8g12479 | 8:1,538,622-1,540,522 | - | C1H8g03892 | CX8g053264 | LOC_Os08g03820 | Os08g0132300 | OsRIP1, Dms1 | Detail |
| C2H8g17025 | 8:1,540,760-1,541,133 | + | C1H8g29120 | - | - | - | - | Detail |
| C2H8g28313 | 8:1,545,631-1,546,008 | + | - | CX8g052213 | LOC_Os08g03830 | Os08g0132500 | - | Detail |
| C2H8g20041 | 8:1,546,702-1,549,065 | + | C1H8g30962 | CX8g054161 | LOC_Os08g03840 | Os08g0132600 | - | Detail |
| C2H8g22836 | 8:1,551,982-1,553,832 | + | C1H8g16949 | CX8g054577 | LOC_Os08g03870 | Os08g0133700 | - | Detail |
| C2H8g28543 | 8:1,555,108-1,557,899 | + | C1H8g29512 | CX8g054577 | LOC_Os08g03990 | Os08g0133600 | - | Detail |
| C2H8g22183 | 8:1,561,239-1,565,499 | - | C1H8g05139 | CX8g054052 | LOC_Os08g04110 | Os08g0135100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |