| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g21680 | 3:31,573,549-31,577,267 | - | C2H3g29438 | CX3g025915 | LOC_Os03g59450 | Os03g0809100 | - | Detail |
| C1H3g00029 | 3:31,578,427-31,580,804 | + | C2H3g20629 | CX3g029386 | LOC_Os03g59460 | Os03g0809200 | - | Detail |
| C1H3g24410 | 3:31,581,594-31,585,210 | - | C2H3g29142 | CX3g030061 | LOC_Os03g59470 | Os03g0809300 | - | Detail |
| C1H3g00154 | 3:31,585,689-31,590,452 | - | C2H3g26798 | CX3g026207 | LOC_Os03g59480 | Os03g0809400 | - | Detail |
| C1H3g24704 | 3:31,595,581-31,600,379 | + | C2H3g14868 | CX3g029129 | LOC_Os03g59530 | Os03g0809700 | - | Detail |
| C1H3g10761 | 3:31,601,003-31,602,117 | - | C2H3g12384 | CX3g029771 | LOC_Os03g59540 | Os03g0809800 | - | Detail |
| C1H3g08226 | 3:31,603,634-31,608,354 | + | C2H3g15000 | CX3g027672 | LOC_Os03g59550 | Os03g0809900 | OsY14b, Y14b, Tsunagi, RBM8 | Detail |
| C1H3g24094 | 3:31,614,612-31,615,670 | + | C2H3g26577 | CX3g030604 | LOC_Os03g59570 | Os03g0810100 | - | Detail |
| C1H3g21092 | 3:31,627,097-31,629,523 | - | C2H3g13200 | CX3g027297 | LOC_Os03g59580 | Os03g0810300 | - | Detail |
| C1H3g11302 | 3:31,636,858-31,642,955 | - | C2H3g12399 | CX3g028362 | LOC_Os03g59590 | Os03g0810600 | - | Detail |
| C1H3g11617 | 3:31,650,667-31,652,531 | - | C2H3g16986 | CX3g030481 | LOC_Os03g59600 | Os03g0810700 | - | Detail |
| C1H3g30674 | 3:31,653,404-31,655,322 | + | C2H3g19706 | CX3g028870 | LOC_Os03g59610 | Os03g0810800 | OsABA2 | Detail |
| C1H3g01412 | 3:31,655,676-31,660,165 | - | C2H3g30149 | CX3g027301 | LOC_Os03g59620 | Os03g0810900 | - | Detail |
| C1H3g18901 | 3:31,662,066-31,668,698 | + | C2H3g14154 | CX3g030819 | LOC_Os03g59640 | Os03g0811100 | - | Detail |
| C1H3g26787 | 3:31,669,197-31,674,200 | + | C2H3g24154 | CX3g031200 | LOC_Os03g59650 | Os03g0811200 | - | Detail |
| C1H3g09735 | 3:31,677,228-31,679,230 | + | C2H3g07522 | CX3g028699 | LOC_Os03g59660 | Os03g0811300 | - | Detail |
| C1H3g09793 | 3:31,681,847-31,683,197 | + | C2H3g08986 | CX3g027906 | LOC_Os03g59670 | Os03g0811400 | - | Detail |
| C1H3g28609 | 3:31,694,355-31,698,287 | - | C2H3g03566 | CX3g026137 | LOC_Os03g59680 | Os03g0811500 | - | Detail |
| C1H3g20712 | 3:31,702,998-31,703,927 | - | C2H3g09547 | CX3g028706 | LOC_Os03g59690 | Os03g0811550 | - | Detail |
| C1H3g19969 | 3:31,704,308-31,707,244 | - | C2H3g28941 | CX3g027737 | LOC_Os03g59700 | Os03g0811600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g01970 | 1:1,151,797-1,152,357 | - | C1H1g03968 | CX1g006045 | LOC_Os01g03380 | Os01g0124600 | RBBI2-4 | Detail |
| C2H1g24719 | 1:1,153,923-1,154,486 | - | C1H1g11231 | CX1g006045 | LOC_Os01g03390 | Os01g0124650 | RBBI2-3 | Detail |
| C2H1g20965 | 1:1,157,151-1,165,257 | + | C1H1g20507 | CX1g002300 | LOC_Os01g03410 | Os01g0124900 | - | Detail |
| C2H1g21334 | 1:1,169,617-1,170,688 | + | C1H1g05292 | CX1g007074 | LOC_Os01g03410 | Os01g0124900 | - | Detail |
| C2H1g10461 | 1:1,173,083-1,173,971 | + | C1H1g05292 | CX1g007074 | LOC_Os01g03420 | Os01g0125000 | - | Detail |
| C2H1g21880 | 1:1,173,976-1,174,242 | + | - | - | LOC_Os01g03420 | Os01g0125000 | - | Detail |
| C2H1g27788 | 1:1,177,186-1,178,209 | + | C1H1g25958 | CX1g005293 | LOC_Os01g03429 | Os01g0125500 | - | Detail |
| C2H1g15023 | 1:1,185,280-1,185,863 | - | - | - | LOC_Os01g03480 | Os01g0125550 | - | Detail |
| C2H1g11982 | 1:1,187,362-1,189,228 | + | C1H1g22903 | CX1g000113 | LOC_Os01g03490 | Os01g0125600 | - | Detail |
| C2H1g26533 | 1:1,193,184-1,193,390 | - | C1H4g30415 | - | LOC_Os10g11630 | - | - | Detail |
| C2H1g23081 | 1:1,194,586-1,199,346 | + | C1H1g14323 | CX1g003198 | LOC_Os01g16130 | Os01g0646700 | - | Detail |
| C2H1g15063 | 1:1,200,025-1,200,633 | + | C1H4g13427 | CX2g020677 | LOC_Os01g19090 | - | - | Detail |
| C2H1g12929 | 1:1,204,105-1,205,059 | + | C1H4g10643 | CX2g022959 | LOC_Os10g10750 | - | - | Detail |
| C2H1g04391 | 1:1,206,332-1,208,369 | - | C1H1g03658 | CX1g004365 | LOC_Os01g03500 | Os01g0125700 | - | Detail |
| C2H1g24064 | 1:1,212,364-1,217,715 | + | C1H1g02796 | CX1g005791 | LOC_Os01g03510 | Os01g0125800 | AIP1, OsAIP1, OsWD40-1 | Detail |
| C2H1g20921 | 1:1,219,897-1,226,207 | + | C1H1g21228 | CX1g001764 | LOC_Os01g03520 | Os01g0125900 | - | Detail |
| C2H1g29668 | 1:1,232,815-1,235,219 | + | C1H1g00524 | CX1g006307 | LOC_Os01g03530 | Os01g0126100 | OsLPR1 | Detail |
| C2H1g25910 | 1:1,236,072-1,244,345 | + | C1H1g03013 | CX1g004728 | LOC_Os01g03570 | Os01g0126600 | OsFDML2 | Detail |
| C2H1g02084 | 1:1,247,587-1,250,653 | + | C1H1g12186 | CX1g004687 | LOC_Os01g03620 | Os01g0126900 | OsLPR4 | Detail |
| C2H1g15386 | 1:1,260,026-1,262,481 | - | C1H1g19697 | CX1g000607 | LOC_Os01g03630 | Os01g0127000 | OsLPR3 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |