| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g22886 | 3:31,434,143-31,437,194 | + | C2H3g27858 | CX3g027239 | LOC_Os03g59170 | Os03g0806500 | - | Detail |
| C1H3g27480 | 3:31,438,246-31,439,316 | + | C2H3g13367 | CX3g026016 | LOC_Os03g59180 | Os03g0806600 | - | Detail |
| C1H3g02437 | 3:31,448,668-31,454,555 | + | - | CX3g028300 | LOC_Os03g59200 | Os03g0806700 | - | Detail |
| C1H3g13375 | 3:31,454,835-31,456,599 | + | C2H3g21807 | CX3g026400 | LOC_Os03g59220 | Os03g0806900 | - | Detail |
| C1H3g26885 | 3:31,466,748-31,470,616 | + | C2H3g14008 | CX3g026921 | LOC_Os03g59240 | Os03g0807100 | - | Detail |
| C1H3g11037 | 3:31,471,922-31,473,936 | - | C2H3g07423 | CX3g028660 | LOC_Os03g59250 | Os03g0807200 | OsDUF1639.1 | Detail |
| C1H3g25570 | 3:31,477,433-31,480,659 | - | C2H3g00577 | CX3g025343 | LOC_Os03g59264 | Os03g0832200 | - | Detail |
| C1H3g16706 | 3:31,480,663-31,483,242 | - | C2H3g14894 | CX3g025343 | LOC_Os03g59264 | Os03g0807400 | - | Detail |
| C1H3g08998 | 3:31,485,698-31,485,895 | + | C2H3g04449 | CX3g027491 | LOC_Os03g59280 | Os03g0807500 | - | Detail |
| C1H3g24691 | 3:31,486,281-31,488,433 | + | - | - | - | - | - | Detail |
| C1H3g08149 | 3:31,489,020-31,492,436 | - | C2H3g23454 | CX3g030187 | LOC_Os03g59290 | Os03g0807600 | - | Detail |
| C1H3g21319 | 3:31,499,552-31,501,687 | + | C2H3g28073 | CX3g028893 | LOC_Os03g59300 | Os03g0807700 | - | Detail |
| C1H3g20626 | 3:31,503,129-31,504,746 | + | C2H3g16190 | CX3g030569 | LOC_Os03g59310 | Os03g0807800 | - | Detail |
| C1H3g05345 | 3:31,506,035-31,507,229 | + | C2H3g13799 | CX3g030704 | LOC_Os03g59320 | Os03g0807900 | - | Detail |
| C1H3g05454 | 3:31,511,254-31,513,879 | + | C2H3g07099 | CX3g029953 | LOC_Os03g59330 | Os03g0808000 | - | Detail |
| C1H3g31749 | 3:31,514,042-31,519,934 | - | C2H3g27778 | CX3g029274 | LOC_Os03g59340 | Os03g0808100 | - | Detail |
| C1H3g13091 | 3:31,526,547-31,528,421 | - | C2H3g01836 | CX3g028432 | LOC_Os03g59360 | Os03g0808300 | - | Detail |
| C1H3g25091 | 3:31,532,185-31,532,907 | - | C2H3g03811 | CX3g025805 | LOC_Os03g59370 | Os03g0808400 | - | Detail |
| C1H3g20305 | 3:31,552,820-31,557,016 | + | C2H3g04526 | CX3g024996 | LOC_Os03g59390 | Os03g0808600 | OsCPK8 | Detail |
| C1H3g10123 | 3:31,565,313-31,570,030 | + | C2H3g07709 | CX3g029969 | LOC_Os03g59430 | Os03g0808900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g05375 | 4:26,429,040-26,429,576 | + | - | CX4g034398 | LOC_Os04g51890 | Os04g0608300 | - | Detail |
| C2H4g29904 | 4:26,439,413-26,445,439 | + | C1H4g12772 | CX4g035281 | LOC_Os04g51900 | Os04g0608400 | - | Detail |
| C2H4g09751 | 4:26,445,897-26,451,851 | - | C1H4g08259 | CX4g034715 | LOC_Os04g51910 | Os04g0608500 | OsRpn2b | Detail |
| C2H4g13061 | 4:26,453,644-26,455,664 | - | C1H4g09401 | CX4g034786 | LOC_Os04g51920 | Os04g0608600 | - | Detail |
| C2H4g04998 | 4:26,462,752-26,467,173 | + | C1H4g08184 | CX4g035213 | LOC_Os04g51940 | Os04g0608800 | - | Detail |
| C2H4g22085 | 4:26,467,276-26,471,406 | - | C1H4g21318 | CX4g033381 | LOC_Os04g51950 | Os04g0608900 | OsDPK4 | Detail |
| C2H4g09513 | 4:26,473,024-26,476,193 | + | C1H4g09678 | CX4g033039 | LOC_Os04g51960 | Os04g0609100 | - | Detail |
| C2H4g22846 | 4:26,482,999-26,486,746 | - | C1H4g11239 | CX4g036027 | LOC_Os04g51970 | Os04g0609200 | - | Detail |
| C2H4g10194 | 4:26,490,363-26,492,231 | + | C1H4g04504 | CX4g036172 | LOC_Os04g51980 | Os04g0609300 | - | Detail |
| C2H4g14068 | 4:26,498,621-26,500,670 | + | C1H4g23593 | CX4g032055 | LOC_Os04g51990 | Os04g0609500 | - | Detail |
| C2H4g14049 | 4:26,504,385-26,507,883 | - | C1H4g02872 | CX4g033415 | LOC_Os04g52000 | Os04g0609600 | - | Detail |
| C2H4g12333 | 4:26,514,664-26,530,102 | - | C1H4g17909 | CX4g035873 | LOC_Os04g52020 | Os04g0609700 | - | Detail |
| C2H4g29505 | 4:26,530,936-26,536,074 | - | C1H4g16882 | CX4g033944 | LOC_Os04g52040 | Os04g0609900 | - | Detail |
| C2H4g09466 | 4:26,536,495-26,541,268 | - | C1H4g30135 | CX4g033944 | LOC_Os04g52050 | Os04g0610000 | - | Detail |
| C2H4g24559 | 4:26,542,707-26,547,695 | - | C1H4g03039 | CX4g036281 | LOC_Os04g52060 | Os04g0610100 | - | Detail |
| C2H4g13843 | 4:26,549,342-26,555,794 | + | C1H4g26012 | CX4g036281 | LOC_Os04g52074 | Os04g0610200 | - | Detail |
| C2H4g28477 | 4:26,560,909-26,561,577 | + | C1H4g06177 | CX4g032544 | LOC_Os04g52090 | Os04g0610400 | ERF77, OsAP2-39, OsERF#077, OsERF077, OsERF77, AP2/EREBP#149, AP2/EREBP149 | Detail |
| C2H4g06680 | 4:26,566,963-26,570,362 | - | C1H4g22248 | CX4g031762 | LOC_Os04g52100 | Os04g0610500 | - | Detail |
| C2H4g15134 | 4:26,572,339-26,573,300 | + | C1H4g09586 | CX4g031847 | LOC_Os04g52110 | Os04g0610600 | - | Detail |
| C2H4g09334 | 4:26,573,865-26,578,492 | - | C1H4g14376 | CX4g033504 | LOC_Os04g52120 | Os04g0610700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |