| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g08097 | 3:31,303,966-31,318,802 | - | C2H3g20910 | CX3g029942 | LOC_Os03g58910 | Os03g0803800 | - | Detail |
| C1H3g06667 | 3:31,319,292-31,323,936 | - | C2H3g11137 | CX3g027632 | LOC_Os03g58920 | Os03g0803900 | - | Detail |
| C1H3g13889 | 3:31,327,556-31,330,061 | + | C2H3g08052 | CX3g025337 | LOC_Os03g58930 | Os03g0804100 | - | Detail |
| C1H3g18947 | 3:31,337,369-31,339,038 | + | C2H3g30090 | CX3g027592 | LOC_Os03g58940 | Os03g0804200 | - | Detail |
| C1H3g06901 | 3:31,339,411-31,340,040 | + | - | - | - | - | - | Detail |
| C1H3g08908 | 3:31,341,706-31,346,966 | - | C2H3g10876 | CX3g024943 | LOC_Os03g58960 | Os03g0804300 | - | Detail |
| C1H3g16246 | 3:31,348,546-31,354,250 | + | C2H3g27290 | CX3g027330 | LOC_Os03g58970 | Os03g0804400 | - | Detail |
| C1H3g07772 | 3:31,361,251-31,366,469 | + | C2H3g08677 | CX3g028935 | LOC_Os03g59020 | Os03g0804800 | - | Detail |
| C1H3g18006 | 3:31,367,537-31,369,493 | - | C2H3g02565 | CX3g027095 | LOC_Os03g59030 | Os03g0804900 | - | Detail |
| C1H3g15435 | 3:31,372,220-31,379,322 | + | C2H3g23943 | CX3g030857 | LOC_Os03g59040 | Os03g0805100 | - | Detail |
| C1H3g07263 | 3:31,379,382-31,384,682 | - | C2H3g11637 | CX3g025026 | LOC_Os03g59050 | Os03g0805200 | - | Detail |
| C1H3g20361 | 3:31,388,921-31,393,492 | + | C2H3g13249 | CX3g030776 | LOC_Os03g59060 | Os03g0805300 | OsPP2A-2 | Detail |
| C1H3g19091 | 3:31,394,936-31,397,184 | - | C2H3g08127 | CX3g031092 | LOC_Os03g59070 | Os03g0805400 | - | Detail |
| C1H3g12066 | 3:31,399,034-31,403,913 | - | C2H3g28737 | CX3g028812 | LOC_Os03g59080 | Os03g0805500 | - | Detail |
| C1H3g30858 | 3:31,406,704-31,409,160 | + | C2H3g24931 | CX3g030524 | LOC_Os03g59110 | Os03g0805600 | - | Detail |
| C1H3g05972 | 3:31,411,591-31,413,933 | + | C2H3g05002 | CX3g030524 | LOC_Os03g59100 | Os03g0805700 | - | Detail |
| C1H3g19569 | 3:31,415,492-31,418,848 | + | C2H3g16039 | CX3g030524 | LOC_Os03g59110 | Os03g0805900 | - | Detail |
| C1H3g19186 | 3:31,420,142-31,420,788 | + | C2H10g26374 | CX10g008540 | - | - | - | Detail |
| C1H3g07939 | 3:31,425,883-31,428,863 | + | C2H3g16313 | CX3g030524 | LOC_Os03g59120 | Os03g0805900 | - | Detail |
| C1H3g06635 | 3:31,429,398-31,433,079 | - | C2H3g13126 | CX3g030941 | LOC_Os03g59160 | Os03g0806400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g00833 | 3:6,156,874-6,159,740 | - | C1H3g13331 | CX3g027611 | LOC_Os03g12930 | Os03g0231900 | - | Detail |
| C2H3g09594 | 3:6,162,907-6,164,923 | - | C1H3g17846 | CX3g030152 | LOC_Os03g12940 | Os03g0231950 | - | Detail |
| C2H3g04826 | 3:6,169,883-6,171,313 | - | C1H3g04613 | CX3g030910 | LOC_Os03g12940 | Os03g0232000 | OsFBO13 | Detail |
| C2H3g04774 | 3:6,176,440-6,180,711 | - | C1H3g30000 | CX3g029956 | LOC_Os03g12950 | Os03g0232200 | - | Detail |
| C2H3g26123 | 3:6,213,044-6,213,472 | + | C1H3g07150 | CX3g028212 | LOC_Os03g12990 | Os03g0232400 | - | Detail |
| C2H3g04799 | 3:6,217,496-6,217,914 | - | C1H3g22613 | CX3g028040 | - | Os02g0738300 | - | Detail |
| C2H3g26449 | 3:6,218,204-6,220,951 | + | C1H3g28102 | CX3g028651 | LOC_Os03g13000 | Os03g0232500 | - | Detail |
| C2H3g15250 | 3:6,226,447-6,227,826 | - | C1H3g02271 | CX3g031218 | LOC_Os03g13010 | Os03g0232600 | ELF1, OsPUB31, OsPUB75, TUD1, OsTUD1 | Detail |
| C2H3g13166 | 3:6,242,290-6,244,009 | - | C1H3g01497 | CX3g029569 | LOC_Os03g13030 | Os03g0232800 | - | Detail |
| C2H3g05297 | 3:6,245,343-6,249,107 | - | C1H3g06697 | CX3g027690 | LOC_Os03g13040 | Os03g0232900 | - | Detail |
| C2H3g03038 | 3:6,259,189-6,260,716 | + | C1H3g26874 | CX3g025391 | LOC_Os03g13050 | Os03g0233000 | - | Detail |
| C2H3g18690 | 3:6,262,896-6,263,675 | - | C1H3g16800 | CX3g030154 | LOC_Os03g13070 | Os03g0233200 | - | Detail |
| C2H3g14812 | 3:6,265,248-6,268,840 | - | C1H3g06079 | CX3g029185 | LOC_Os03g13080 | Os03g0233300 | OsLysM-RLK2, OsLYK5, OsNFR5/OsRLK2 | Detail |
| C2H3g23005 | 3:6,272,046-6,275,587 | + | C1H3g06632 | CX3g028548 | LOC_Os03g13100 | Os03g0233500 | - | Detail |
| C2H3g09799 | 3:6,279,462-6,283,564 | + | C1H3g16553 | CX3g029407 | LOC_Os03g13130 | Os03g0233800 | - | Detail |
| C2H3g00329 | 3:6,284,070-6,297,053 | - | - | - | - | - | - | Detail |
| C2H3g17247 | 3:6,299,016-6,299,858 | - | C1H3g27731 | CX3g025432 | LOC_Os03g13140 | Os03g0233900 | Hb1, OsPgb1.1 | Detail |
| C2H3g15076 | 3:6,302,555-6,307,791 | + | - | CX3g028989 | LOC_Os03g21310 | - | - | Detail |
| C2H3g00667 | 3:6,318,526-6,319,400 | + | C1H3g19664 | CX3g027207 | LOC_Os03g13150 | Os03g0234000 | - | Detail |
| C2H3g02090 | 3:6,321,649-6,322,638 | + | C1H3g02151 | CX3g030474 | LOC_Os03g13160 | Os03g0234100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |