| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g05639 | 3:30,882,766-30,882,960 | - | C2H3g00892 | CX3g029982 | LOC_Os03g58140 | Os03g0795600 | - | Detail |
| C1H3g08848 | 3:30,883,122-30,884,802 | - | C2H3g03004 | CX3g029982 | LOC_Os03g58140 | Os03g0795600 | - | Detail |
| C1H3g16443 | 3:30,886,963-30,889,346 | - | C2H3g02014 | CX3g025433 | LOC_Os03g58150 | Os03g0795800 | - | Detail |
| C1H3g00668 | 3:30,889,611-30,892,801 | + | C2H3g19484 | CX3g029604 | LOC_Os03g58160 | Os03g0795900 | HSFA2E, HSfA2e, OsHsfA2e, OsHsf-12, HSF12 | Detail |
| C1H3g17982 | 3:30,901,091-30,901,796 | + | C2H3g13882 | - | - | Os03g0796000 | - | Detail |
| C1H3g06155 | 3:30,904,898-30,906,624 | + | C2H3g08936 | CX3g029140 | LOC_Os03g58170 | Os03g0744600 | - | Detail |
| C1H3g17510 | 3:30,908,070-30,908,327 | + | - | - | - | - | - | Detail |
| C1H3g22799 | 3:30,925,580-30,926,198 | - | C2H3g19170 | CX3g029920 | LOC_Os03g58180 | Os03g0796301 | - | Detail |
| C1H3g12446 | 3:30,926,884-30,928,201 | - | C2H3g21611 | CX3g028585 | LOC_Os03g58190 | Os03g0796400 | - | Detail |
| C1H3g01827 | 3:30,931,559-30,933,936 | - | C2H3g18356 | CX3g026109 | LOC_Os03g58204 | Os03g0796501 | - | Detail |
| C1H3g17865 | 3:30,940,398-30,940,876 | + | - | - | - | - | - | Detail |
| C1H3g26452 | 3:30,943,982-30,944,992 | + | C2H4g07739 | CX3g025705 | - | Os03g0168800 | - | Detail |
| C1H3g31311 | 3:30,946,560-30,949,428 | + | C2H3g24067 | CX3g026507 | - | - | - | Detail |
| C1H3g10470 | 3:30,963,999-30,966,262 | + | C2H3g06838 | CX3g027699 | LOC_Os03g58230 | Os03g0796600 | OsDUF50605 | Detail |
| C1H3g27596 | 3:30,977,861-30,984,244 | + | C2H3g07985 | CX3g028795 | LOC_Os03g58240 | Os03g0796800 | - | Detail |
| C1H3g15009 | 3:30,984,601-30,988,966 | - | C2H3g15466 | CX3g028970 | LOC_Os03g58250 | Os03g0796900 | REB, OsZIP33, RISBZ2, OsbZIP33 | Detail |
| C1H3g17969 | 3:30,992,592-30,996,090 | - | C2H3g10564 | CX3g025677 | LOC_Os03g58260 | Os03g0797300 | - | Detail |
| C1H3g11238 | 3:30,999,028-31,001,284 | - | C2H3g29626 | CX3g025677 | LOC_Os03g58290 | Os03g0797300 | - | Detail |
| C1H3g02359 | 3:31,005,407-31,009,821 | - | C2H3g15812 | CX3g025677 | LOC_Os03g58300 | Os03g0797300 | - | Detail |
| C1H3g02823 | 3:31,013,247-31,014,934 | - | C2H3g24914 | CX3g025677 | LOC_Os03g58320 | Os03g0797300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H11g30061 | 11:22,913,484-22,913,807 | + | C1H11g08762 | - | LOC_Os11g43520 | Os11g0655900 | - | Detail |
| C2H11g27850 | 11:22,918,071-22,918,400 | + | C1H11g24543 | - | LOC_Os11g43530 | Os11g0656000 | - | Detail |
| C2H11g03558 | 11:22,926,281-22,926,610 | + | C1H11g23714 | - | LOC_Os11g43530 | Os11g0656000 | - | Detail |
| C2H11g05429 | 11:22,931,779-22,941,691 | + | C1H11g06947 | CX11g011080 | LOC_Os11g43600 | Os11g0657100 | - | Detail |
| C2H11g06950 | 11:22,942,355-22,943,822 | - | C1H11g31018 | CX11g014634 | LOC_Os11g43610 | Os11g0657200 | - | Detail |
| C2H11g26337 | 11:22,944,470-22,945,887 | + | C1H11g13451 | CX11g012531 | LOC_Os11g43620 | Os11g0657300 | - | Detail |
| C2H11g06588 | 11:22,947,441-22,951,700 | - | C1H11g19368 | CX11g012696 | LOC_Os11g43640 | Os11g0657400 | OsPEX1 | Detail |
| C2H11g28248 | 11:22,960,258-22,962,136 | - | C1H11g21860 | CX11g013750 | LOC_Os11g43700 | Os11g0657900 | RYMV3 | Detail |
| C2H11g20964 | 11:22,963,060-22,965,122 | - | C1H11g21860 | CX11g013750 | LOC_Os11g43700 | Os11g0657900 | RYMV3 | Detail |
| C2H11g26290 | 11:22,988,712-22,989,247 | + | C1H11g13158 | CX11g013087 | - | - | - | Detail |
| C2H11g25118 | 11:22,991,584-22,992,080 | + | C1H11g13158 | CX11g013087 | - | - | - | Detail |
| C2H11g14074 | 11:23,015,055-23,018,610 | + | C1H11g11705 | CX11g011519 | LOC_Os11g43740 | Os11g0658700 | MADS68, OsMADS68 | Detail |
| C2H11g17023 | 11:23,020,436-23,024,426 | - | C1H11g02191 | CX11g012897 | LOC_Os11g43750 | Os11g0658800 | - | Detail |
| C2H11g13773 | 11:23,037,988-23,041,648 | + | C1H11g19904 | CX11g013779 | LOC_Os11g43760 | Os11g0658900 | - | Detail |
| C2H11g05292 | 11:23,045,684-23,046,226 | + | C1H11g08129 | CX11g013129 | LOC_Os11g43790 | Os11g0659200 | - | Detail |
| C2H11g15771 | 11:23,052,264-23,058,544 | + | C1H11g18532 | CX11g012462 | LOC_Os11g43800 | Os11g0659400 | - | Detail |
| C2H11g22992 | 11:23,058,867-23,063,662 | - | C1H11g21378 | CX11g012970 | LOC_Os11g43820 | Os11g0659500 | - | Detail |
| C2H11g02881 | 11:23,066,532-23,070,414 | - | - | - | - | Os11g0659600 | - | Detail |
| C2H11g25381 | 11:23,072,722-23,075,910 | - | C1H11g03043 | CX11g012115 | LOC_Os11g43840 | Os11g0659700 | - | Detail |
| C2H11g28940 | 11:23,078,880-23,082,799 | - | C1H11g13673 | CX11g014804 | LOC_Os11g43860 | Os11g0660000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |