| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g10930 | 3:30,757,822-30,760,805 | - | C2H3g21443 | CX3g028037 | LOC_Os03g57870 | Os03g0792600 | - | Detail |
| C1H3g25888 | 3:30,765,350-30,766,912 | + | C2H3g25447 | CX3g029236 | LOC_Os03g57880 | Os03g0792800 | OsBGL8 | Detail |
| C1H3g03780 | 3:30,767,617-30,770,263 | - | C2H3g20733 | CX3g030105 | LOC_Os03g57890 | Os03g0792900 | OsSAP6 | Detail |
| C1H3g10181 | 3:30,771,927-30,773,357 | + | C2H3g04800 | - | - | - | - | Detail |
| C1H3g01153 | 3:30,776,154-30,776,939 | - | C2H3g05066 | CX3g031111 | LOC_Os03g57920 | Os03g0793300 | - | Detail |
| C1H3g25262 | 3:30,782,186-30,789,210 | + | C2H3g15687 | CX3g027479 | LOC_Os03g57940 | Os03g0793500 | - | Detail |
| C1H3g03977 | 3:30,793,091-30,797,679 | + | C2H3g19336 | CX3g026412 | LOC_Os03g57950 | Os03g0793600 | - | Detail |
| C1H3g20219 | 3:30,802,726-30,803,293 | + | C2H3g14270 | - | - | - | - | Detail |
| C1H3g10439 | 3:30,803,821-30,806,099 | + | C2H3g20071 | CX3g031262 | LOC_Os03g57960 | Os03g0793700 | OsCDP3.10, qSP3 | Detail |
| C1H3g28172 | 3:30,806,758-30,807,393 | - | C2H3g00562 | CX3g031217 | LOC_Os03g57970 | Os03g0793800 | - | Detail |
| C1H3g24095 | 3:30,809,615-30,810,987 | - | C2H3g09651 | CX3g025005 | LOC_Os03g57980 | Os03g0793900 | - | Detail |
| C1H3g11974 | 3:30,811,471-30,812,123 | + | C2H3g03743 | CX3g031217 | LOC_Os03g57990 | Os03g0794000 | - | Detail |
| C1H3g26466 | 3:30,821,647-30,825,066 | - | C2H3g06823 | CX3g025037 | LOC_Os03g58040 | Os03g0794500 | - | Detail |
| C1H3g11189 | 3:30,829,658-30,831,009 | - | C2H3g22104 | CX3g029860 | LOC_Os03g58050 | Os03g0794700 | - | Detail |
| C1H3g18133 | 3:30,833,844-30,844,644 | + | C2H3g21984 | CX3g027656 | LOC_Os03g58060 | Os03g0794800 | - | Detail |
| C1H3g31065 | 3:30,845,393-30,848,733 | + | C2H3g09287 | CX3g027455 | LOC_Os03g58070 | Os03g0794900 | - | Detail |
| C1H3g14917 | 3:30,849,457-30,854,785 | - | C2H3g10350 | CX3g025789 | LOC_Os03g58080 | Os03g0795000 | - | Detail |
| C1H3g21726 | 3:30,855,687-30,857,631 | - | C2H3g14214 | CX7g047050 | LOC_Os03g58090 | Os03g0795100 | - | Detail |
| C1H3g19476 | 3:30,866,326-30,868,000 | - | C2H3g03262 | CX3g026410 | LOC_Os03g58110 | Os03g0795300 | - | Detail |
| C1H3g15891 | 3:30,879,208-30,882,605 | + | C2H3g27733 | CX3g026673 | LOC_Os03g58130 | Os03g0795500 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H7g05915 | 7:19,414,116-19,416,555 | + | C1H7g08535 | CX7g049068 | LOC_Os07g39530 | Os07g0584200 | - | Detail |
| C2H7g08325 | 7:19,436,359-19,440,865 | + | C1H7g30537 | CX7g047975 | LOC_Os07g39560 | Os07g0584500 | - | Detail |
| C2H7g01401 | 7:19,447,972-19,450,928 | + | C1H7g23144 | CX7g047283 | LOC_Os07g39590 | Os07g0584900 | - | Detail |
| C2H7g01095 | 7:19,464,957-19,465,682 | - | - | - | - | - | - | Detail |
| C2H7g14449 | 7:19,466,988-19,469,370 | + | C1H7g20939 | CX7g048420 | LOC_Os07g39620 | Os07g0585000 | - | Detail |
| C2H7g18029 | 7:19,474,895-19,480,979 | + | C1H7g17896 | CX7g049289 | LOC_Os07g39630 | Os07g0585100 | OsMO25A, OsMO25A1 | Detail |
| C2H7g05447 | 7:19,481,937-19,482,911 | - | C1H7g10568 | CX7g048593 | LOC_Os07g39640 | Os07g0585200 | - | Detail |
| C2H7g25479 | 7:19,492,931-19,494,645 | + | C1H7g00944 | - | LOC_Os07g39680 | Os07g0585500 | OSPGYRP, OsPGYRP | Detail |
| C2H7g11944 | 7:19,495,495-19,502,747 | - | C1H7g09785 | CX7g050118 | LOC_Os07g39690 | Os07g0585600 | - | Detail |
| C2H7g28175 | 7:19,507,772-19,508,782 | + | C1H7g25396 | - | LOC_Os07g39700 | Os07g0585700 | SDR4, Sdr4, OsSdr4, OsSdr4-n, OsSdr4-k | Detail |
| C2H7g05083 | 7:19,509,478-19,513,660 | - | C1H7g16934 | CX7g047965 | LOC_Os07g39710 | Os07g0585800 | - | Detail |
| C2H7g28026 | 7:19,518,471-19,522,057 | - | C1H7g26737 | CX7g049839 | LOC_Os07g39730 | Os07g0586000 | - | Detail |
| C2H7g03070 | 7:19,523,926-19,525,878 | - | C1H7g11177 | CX7g046857 | LOC_Os07g39740 | Os07g0586100 | PChE | Detail |
| C2H7g20298 | 7:19,527,188-19,531,034 | - | C1H7g31708 | CX7g050090 | LOC_Os07g39750 | Os07g0586200 | - | Detail |
| C2H7g01650 | 7:19,539,187-19,545,912 | + | C1H7g28144 | CX7g046227 | LOC_Os07g39780 | Os07g0586500 | - | Detail |
| C2H7g25217 | 7:19,548,054-19,551,239 | - | C1H7g03308 | CX7g049224 | LOC_Os07g39800 | Os07g0586700 | - | Detail |
| C2H7g30340 | 7:19,592,283-19,594,691 | + | C1H7g04106 | CX7g047969 | LOC_Os07g39830 | Os07g0587000 | - | Detail |
| C2H7g05226 | 7:19,595,556-19,598,379 | - | C1H7g17905 | CX7g049988 | - | - | - | Detail |
| C2H7g03999 | 7:19,601,342-19,604,412 | - | C1H7g10975 | CX7g047961 | LOC_Os07g39840 | Os07g0587100 | - | Detail |
| C2H7g16477 | 7:19,606,919-19,612,851 | - | C1H7g12981 | CX7g047553 | LOC_Os07g39850 | Os07g0587250 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |