| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g07290 | 3:30,447,966-30,455,222 | - | C2H3g24386 | CX3g029999 | LOC_Os03g57160 | Os03g0785300 | - | Detail |
| C1H3g31468 | 3:30,455,537-30,457,515 | + | C2H3g16096 | CX3g025222 | LOC_Os03g57170 | Os03g0785500 | - | Detail |
| C1H3g09812 | 3:30,479,125-30,482,503 | + | C2H3g04828 | CX3g026845 | LOC_Os03g57210 | Os03g0786000 | - | Detail |
| C1H3g18801 | 3:30,483,838-30,487,350 | + | C2H3g03414 | CX3g026915 | LOC_Os03g57220 | Os03g0786100 | - | Detail |
| C1H3g21165 | 3:30,508,458-30,512,758 | - | C2H3g29782 | CX3g028697 | LOC_Os03g57260 | Os03g0786500 | - | Detail |
| C1H3g31737 | 3:30,516,983-30,522,171 | + | C2H3g21493 | CX3g030417 | LOC_Os03g57280 | Os03g0786700 | - | Detail |
| C1H3g24529 | 3:30,523,086-30,530,176 | + | C2H3g10038 | CX3g028623 | LOC_Os03g57290 | Os03g0786800 | OsCUL4 | Detail |
| C1H3g09796 | 3:30,530,578-30,541,947 | + | C2H3g05716 | CX3g029095 | LOC_Os03g57300 | Os03g0786900 | - | Detail |
| C1H3g02488 | 3:30,545,794-30,546,780 | + | C2H3g27192 | CX3g028386 | LOC_Os03g57310 | Os03g0787000 | OsSYP121 | Detail |
| C1H3g16088 | 3:30,547,496-30,549,708 | - | C2H3g21961 | CX3g030867 | LOC_Os03g57320 | Os03g0787100 | - | Detail |
| C1H3g27975 | 3:30,549,114-30,549,650 | + | - | - | - | - | - | Detail |
| C1H3g27493 | 3:30,550,771-30,554,669 | - | C2H3g21062 | CX3g026667 | LOC_Os03g57330 | Os03g0787200 | - | Detail |
| C1H3g15177 | 3:30,562,744-30,566,195 | + | C2H3g19623 | CX3g029651 | LOC_Os03g57340 | Os03g0787300 | OsDjA5 | Detail |
| C1H3g15799 | 3:30,570,399-30,571,056 | - | - | - | - | - | - | Detail |
| C1H3g31327 | 3:30,571,108-30,571,287 | - | - | - | - | - | - | Detail |
| C1H3g04736 | 3:30,573,063-30,573,365 | - | C2H3g03483 | CX3g028358 | LOC_Os03g57360 | Os03g0813700 | - | Detail |
| C1H3g08399 | 3:30,576,157-30,577,784 | - | C2H3g03483 | CX3g028358 | LOC_Os03g57400 | Os03g0788000 | - | Detail |
| C1H3g02833 | 3:30,580,252-30,580,872 | + | C2H3g16218 | CX3g028483 | LOC_Os03g57410 | Os03g0788100 | - | Detail |
| C1H3g09747 | 3:30,584,790-30,587,122 | + | C2H3g07607 | CX3g026498 | LOC_Os03g57420 | Os03g0788200 | OsMl-2, OsML-2 | Detail |
| C1H3g04463 | 3:30,589,970-30,600,977 | + | C2H3g07013 | CX3g025423 | LOC_Os03g57430 | Os03g0788300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g15371 | 2:31,819,932-31,821,581 | - | C1H2g09762 | CX2g021880 | LOC_Os02g57110 | Os02g0816200 | - | Detail |
| C2H2g29121 | 2:31,835,228-31,844,256 | + | C1H2g03514 | CX2g019842 | LOC_Os02g57120 | Os02g0816300 | - | Detail |
| C2H2g15969 | 2:31,845,458-31,851,053 | + | C1H2g22705 | CX2g021019 | LOC_Os02g57140 | Os02g0816400 | - | Detail |
| C2H2g14831 | 2:31,857,801-31,859,343 | + | C1H2g08028 | CX2g020615 | LOC_Os02g57150 | Os02g0816500 | - | Detail |
| C2H2g13853 | 2:31,859,838-31,864,146 | - | C1H2g13297 | CX2g024238 | LOC_Os02g57160 | Os02g0816600 | - | Detail |
| C2H2g04727 | 2:31,865,145-31,866,836 | - | C1H2g29075 | CX2g021688 | LOC_Os02g57170 | Os02g0816700 | - | Detail |
| C2H2g17597 | 2:31,867,100-31,871,138 | + | C1H2g16275 | CX2g019354 | LOC_Os02g57180 | Os02g0816800 | OsNDUFA9, FLO13 | Detail |
| C2H2g26727 | 2:31,879,738-31,894,132 | + | C1H2g06133 | CX2g021988 | LOC_Os02g57190 | Os02g0816900 | OSMYOXIB | Detail |
| C2H2g04285 | 2:31,894,818-31,900,059 | + | C1H2g05881 | CX2g019948 | LOC_Os02g57200 | Os02g0817000 | - | Detail |
| C2H2g10819 | 2:31,904,658-31,906,075 | + | C1H2g01056 | CX2g024220 | LOC_Os02g57210 | - | - | Detail |
| C2H2g05620 | 2:31,908,819-31,913,722 | - | C1H2g12935 | CX2g024286 | LOC_Os02g57220 | Os02g0817200 | - | Detail |
| C2H2g26600 | 2:31,915,699-31,920,017 | + | C1H2g30239 | CX2g021309 | LOC_Os02g57240 | Os02g0817500 | - | Detail |
| C2H2g18662 | 2:31,921,422-31,923,136 | - | C1H2g30753 | CX2g020596 | LOC_Os02g57250 | Os02g0817600 | - | Detail |
| C2H2g25584 | 2:31,927,935-31,932,109 | - | C1H2g06843 | CX2g019038 | LOC_Os02g57260 | Os02g0817700 | - | Detail |
| C2H2g16029 | 2:31,933,026-31,937,461 | - | C1H2g21810 | CX2g019127 | LOC_Os02g57270 | Os02g0817800 | RTBP1, rtbp1, TBP1, OsTBP1 | Detail |
| C2H2g17783 | 2:31,939,273-31,940,680 | + | C1H2g00976 | CX2g024084 | LOC_Os02g57280 | Os02g0818000 | OsCBSX3 | Detail |
| C2H2g09230 | 2:31,940,206-31,951,495 | - | C1H2g14875 | CX2g022651 | LOC_Os02g57290 | Os02g0817900 | - | Detail |
| C2H2g21254 | 2:31,956,647-31,963,037 | - | C1H2g16141 | CX2g023430 | LOC_Os02g57305 | Os02g0818450 | - | Detail |
| C2H2g04028 | 2:31,964,403-31,966,879 | - | C1H2g18181 | CX2g023890 | LOC_Os02g57330 | Os02g0818700 | - | Detail |
| C2H2g08224 | 2:31,967,134-31,971,252 | + | C1H2g26889 | CX2g022489 | LOC_Os02g57340 | Os02g0818800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |