| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g04719 | 3:30,048,261-30,049,679 | + | C2H3g00007 | CX3g026587 | LOC_Os03g56450 | Os03g0775900 | - | Detail |
| C1H3g16991 | 3:30,051,535-30,058,487 | + | C2H3g28249 | CX3g026064 | LOC_Os03g56460 | Os03g0776000 | - | Detail |
| C1H3g04454 | 3:30,058,885-30,060,862 | - | C2H3g15730 | CX3g028659 | LOC_Os03g56470 | Os03g0776100 | OsPERK4 | Detail |
| C1H3g02970 | 3:30,083,179-30,085,217 | + | C2H3g19254 | CX3g025698 | LOC_Os03g56540 | Os03g0776900 | - | Detail |
| C1H3g04407 | 3:30,097,126-30,098,904 | + | C2H3g09900 | CX3g029754 | LOC_Os03g56580 | Os03g0777000 | ONAC066 | Detail |
| C1H3g14095 | 3:30,100,606-30,103,597 | - | C2H3g20066 | CX3g026134 | LOC_Os03g56590 | Os03g0777100 | - | Detail |
| C1H3g29609 | 3:30,105,194-30,106,931 | - | C2H3g09685 | CX3g028274 | LOC_Os03g56610 | Os03g0777500 | - | Detail |
| C1H3g10794 | 3:30,109,421-30,112,114 | + | C2H3g13878 | CX3g026442 | LOC_Os03g56620 | Os03g0777600 | - | Detail |
| C1H3g30679 | 3:30,112,281-30,118,671 | - | C2H3g10928 | CX3g029819 | LOC_Os03g56630 | Os03g0777700 | - | Detail |
| C1H3g05671 | 3:30,124,647-30,132,351 | + | C2H3g07763 | CX3g031249 | LOC_Os03g56660 | Os03g0778000 | - | Detail |
| C1H3g25718 | 3:30,132,787-30,133,497 | - | - | CX3g031326 | LOC_Os03g56670 | Os03g0778100 | OsPS1-F | Detail |
| C1H3g14021 | 3:30,193,021-30,193,974 | - | C2H3g24740 | CX3g030337 | LOC_Os03g56770 | Os03g0779800 | - | Detail |
| C1H3g21633 | 3:30,206,264-30,207,187 | - | C2H3g24740 | CX3g030337 | LOC_Os03g56710 | Os03g0779000 | - | Detail |
| C1H3g29791 | 3:30,221,742-30,226,820 | - | - | CX3g025944 | - | Os03g0748750 | - | Detail |
| C1H3g06826 | 3:30,237,076-30,237,720 | - | C2H3g24740 | CX3g030337 | LOC_Os03g56770 | Os03g0779800 | - | Detail |
| C1H3g23563 | 3:30,250,569-30,253,537 | - | C2H3g20617 | CX3g025581 | LOC_Os03g56790 | Os03g0780400 | OsADF2 | Detail |
| C1H3g23600 | 3:30,255,611-30,260,618 | + | C2H3g18001 | CX3g026219 | LOC_Os03g56800 | Os03g0780500 | - | Detail |
| C1H3g17595 | 3:30,261,445-30,264,457 | + | C2H3g14864 | CX3g030860 | LOC_Os03g56810 | Os03g0780600 | - | Detail |
| C1H3g26439 | 3:30,266,481-30,267,866 | + | C2H3g16433 | CX3g026170 | LOC_Os03g56820 | Os03g0780800 | - | Detail |
| C1H3g14922 | 3:30,269,354-30,271,880 | - | C2H3g03306 | CX3g028624 | LOC_Os03g56830 | Os03g0780900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H7g24774 | 7:23,968,723-23,969,058 | + | C1H7g16933 | CX3g025397 | LOC_Os07g48330 | Os07g0681300 | CYP714B1 | Detail |
| C2H7g09291 | 7:23,973,346-23,974,854 | + | C1H7g31370 | CX7g048614 | LOC_Os07g48330 | Os07g0681300 | CYP714B1 | Detail |
| C2H7g11641 | 7:23,980,849-23,995,652 | - | C1H7g15272 | CX7g049245 | LOC_Os07g45750 | Os07g0418100 | - | Detail |
| C2H7g21440 | 7:23,998,515-24,006,291 | + | C1H7g13652 | CX7g050350 | LOC_Os07g48350 | Os07g0681500 | - | Detail |
| C2H7g14830 | 7:24,006,855-24,013,900 | + | C1H7g23608 | CX7g048418 | LOC_Os07g48360 | Os07g0681600 | OsRecQ886 | Detail |
| C2H7g29810 | 7:24,015,940-24,021,033 | + | C1H7g23117 | CX7g049603 | LOC_Os07g48370 | Os07g0681700 | - | Detail |
| C2H7g24286 | 7:24,028,193-24,029,670 | + | C1H7g27841 | CX7g049645 | LOC_Os07g48390 | Os07g0682000 | OsHIPP9 | Detail |
| C2H7g06356 | 7:24,035,476-24,039,578 | - | C1H7g24464 | CX7g046293 | LOC_Os07g48410 | Os07g0682400 | - | Detail |
| C2H7g20348 | 7:24,063,726-24,067,699 | - | C1H7g23378 | CX7g049823 | LOC_Os07g48420 | Os07g0682700 | - | Detail |
| C2H7g22068 | 7:24,070,178-24,074,851 | + | C1H7g11299 | CX7g047275 | LOC_Os07g48430 | Os07g0682800 | OsAPY3, OsAPY, RTH1 | Detail |
| C2H7g15907 | 7:24,101,132-24,102,782 | + | C1H7g23344 | CX7g047935 | LOC_Os07g48450 | Os07g0683200 | OsNAC103 | Detail |
| C2H7g07345 | 7:24,105,423-24,107,491 | + | C1H7g25988 | CX7g047088 | LOC_Os07g48490 | Os07g0683900 | - | Detail |
| C2H7g06108 | 7:24,110,344-24,110,713 | + | - | - | - | - | - | Detail |
| C2H7g26142 | 7:24,115,190-24,117,192 | + | C1H7g25988 | CX7g047088 | LOC_Os07g48460 | Os07g0683600 | OsEULD2 | Detail |
| C2H7g23076 | 7:24,117,618-24,118,733 | + | - | - | - | - | - | Detail |
| C2H7g02908 | 7:24,123,091-24,124,140 | + | C1H7g13613 | CX7g047088 | LOC_Os07g48500 | Os07g0684000 | OsEULS2 | Detail |
| C2H7g28195 | 7:24,126,142-24,127,618 | - | C1H7g12898 | CX7g046590 | LOC_Os07g48510 | Os07g0684100 | - | Detail |
| C2H7g19082 | 7:24,142,109-24,143,198 | - | C1H7g14214 | CX7g047739 | LOC_Os07g48550 | Os07g0684800 | - | Detail |
| C2H7g21427 | 7:24,173,099-24,175,055 | + | C1H7g16982 | CX7g049740 | LOC_Os07g48560 | Os07g0684900 | WOX11, OsWOX11, Os WOX11, OsWOX12A | Detail |
| C2H7g27364 | 7:24,178,131-24,181,650 | - | C1H7g24592 | CX7g050407 | LOC_Os07g48570 | Os07g0685000 | OsCDF3, RDD2 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |