| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g29067 | 3:29,881,308-29,882,118 | + | C2H3g12840 | CX3g028014 | LOC_Os03g56160 | Os03g0772600 | - | Detail |
| C1H3g22167 | 3:29,884,694-29,885,360 | + | C2H3g23317 | CX3g028800 | LOC_Os03g56130 | Os03g0669300 | - | Detail |
| C1H3g26236 | 3:29,891,223-29,896,116 | + | C2H3g12690 | CX3g025388 | LOC_Os03g56110 | Os03g0771500 | - | Detail |
| C1H3g06172 | 3:29,910,518-29,912,059 | + | C2H3g15287 | CX3g028141 | LOC_Os03g56190 | Os03g0772800 | - | Detail |
| C1H3g27520 | 3:29,931,113-29,937,034 | - | C2H3g23997 | CX3g029781 | LOC_Os03g56234 | Os03g0773100 | - | Detail |
| C1H3g12061 | 3:29,939,988-29,944,559 | - | C2H3g30456 | CX3g031131 | LOC_Os03g56250 | Os03g0773300 | - | Detail |
| C1H3g19745 | 3:29,955,768-29,963,615 | + | C2H3g15647 | CX3g027730 | LOC_Os03g56260 | Os03g0773600 | - | Detail |
| C1H3g13238 | 3:29,971,181-29,975,252 | + | C2H3g25453 | CX3g029516 | LOC_Os03g56270 | Os03g0773700 | - | Detail |
| C1H3g14912 | 3:29,978,851-29,982,138 | - | C2H3g25804 | CX3g025155 | LOC_Os03g56280 | Os03g0773800 | - | Detail |
| C1H3g03566 | 3:29,983,202-29,986,516 | - | C2H3g28843 | CX3g026775 | LOC_Os03g56300 | Os03g0774200 | - | Detail |
| C1H3g22996 | 3:29,987,527-29,994,806 | - | C2H3g04435 | CX3g031127 | LOC_Os03g56310 | Os03g0774300 | - | Detail |
| C1H3g19261 | 3:29,997,987-29,999,698 | + | C2H3g26015 | CX3g025412 | LOC_Os03g56320 | Os03g0774400 | - | Detail |
| C1H3g10204 | 3:30,014,437-30,015,072 | - | C2H3g25248 | CX3g027698 | LOC_Os03g56370 | Os03g0775000 | - | Detail |
| C1H3g07173 | 3:30,016,108-30,016,990 | - | C2H3g25248 | CX3g027698 | LOC_Os03g56370 | Os03g0775000 | - | Detail |
| C1H3g14191 | 3:30,019,407-30,023,914 | + | C2H3g05048 | CX3g026008 | LOC_Os03g56380 | Os03g0775200 | - | Detail |
| C1H3g27485 | 3:30,024,625-30,028,017 | + | C2H3g23811 | CX3g026938 | LOC_Os03g56390 | Os03g0775300 | - | Detail |
| C1H3g13212 | 3:30,028,349-30,030,760 | - | C2H3g12716 | CX3g030898 | LOC_Os03g56400 | Os03g0775400 | - | Detail |
| C1H3g05680 | 3:30,031,592-30,035,139 | + | C2H3g27854 | CX3g030889 | LOC_Os03g56410 | Os03g0775500 | - | Detail |
| C1H3g30894 | 3:30,038,646-30,041,365 | + | C2H3g25642 | CX3g030664 | LOC_Os03g56420 | Os03g0775600 | - | Detail |
| C1H3g19822 | 3:30,042,628-30,046,246 | + | C2H3g18914 | CX3g029071 | LOC_Os03g56430 | Os03g0775700 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g16607 | 2:7,830,052-7,830,681 | - | C1H2g09152 | CX2g020098 | LOC_Os02g15080 | Os02g0178600 | - | Detail |
| C2H2g25041 | 2:7,832,293-7,834,091 | - | C1H2g03589 | CX2g019611 | LOC_Os02g15070 | Os02g0248800 | - | Detail |
| C2H2g29377 | 2:7,839,932-7,841,746 | - | C1H2g22435 | CX2g019611 | LOC_Os02g15090 | Os02g0249000 | GLUD1, GluD1, GluD-1, OsEnS-33 | Detail |
| C2H2g29796 | 2:7,865,918-7,867,304 | + | C1H2g14225 | CX2g024165 | LOC_Os02g15140 | Os02g0249500 | - | Detail |
| C2H2g27895 | 2:7,886,184-7,888,058 | - | C1H2g31875 | CX2g020506 | LOC_Os02g15160 | Os02g0249700 | - | Detail |
| C2H2g30056 | 2:7,894,512-7,896,331 | - | C1H2g23896 | CX2g019611 | LOC_Os02g15178 | Os02g0249800 | - | Detail |
| C2H2g20324 | 2:7,899,981-7,901,800 | + | C1H2g23896 | CX2g019611 | LOC_Os02g15169 | Os02g0249900 | - | Detail |
| C2H2g17924 | 2:7,915,114-7,922,971 | + | C1H2g06356 | CX2g022131 | LOC_Os02g15220 | Os02g0250300 | OsGTE4 | Detail |
| C2H2g13396 | 2:7,925,910-7,929,407 | + | C1H2g12357 | CX2g022354 | LOC_Os02g15230 | Os02g0250400 | BS1, OsGELP33 | Detail |
| C2H2g03256 | 2:7,950,129-7,954,907 | - | C1H2g07509 | CX2g022128 | - | - | - | Detail |
| C2H2g19821 | 2:7,954,163-7,956,556 | + | C1H2g16469 | CX2g023206 | LOC_Os02g15270 | Os02g0251700 | - | Detail |
| C2H2g27477 | 2:7,970,037-7,974,400 | - | C1H2g12332 | CX2g020535 | LOC_Os02g15310 | Os02g0252100 | OsSCL30a | Detail |
| C2H2g02364 | 2:7,993,735-7,995,144 | + | C1H2g26833 | CX2g021498 | LOC_Os02g15340 | Os02g0252200 | - | Detail |
| C2H2g11974 | 2:8,000,199-8,001,344 | - | C1H2g16698 | CX2g020199 | LOC_Os02g15350 | Os02g0252400 | RPBF, OsDof3, OsDOF3, OsEnS-34, OsDof10, Dof10, OsDof-10, OsDOF1, DOF1, DOF3 | Detail |
| C2H2g21408 | 2:8,009,303-8,011,587 | - | C1H2g12137 | CX2g021836 | LOC_Os02g15360 | Os02g0252600 | - | Detail |
| C2H2g09029 | 2:8,020,214-8,020,899 | - | C1H2g12137 | CX2g021836 | LOC_Os02g15360 | Os02g0252600 | - | Detail |
| C2H2g22380 | 2:8,030,648-8,032,504 | - | C1H2g17825 | CX2g024046 | LOC_Os02g15520 | Os02g0254550 | - | Detail |
| C2H2g23473 | 2:8,044,581-8,045,009 | - | C1H2g01415 | CX2g020061 | LOC_Os02g15540 | Os02g0254600 | - | Detail |
| C2H2g25388 | 2:8,061,562-8,065,848 | - | C1H2g02874 | CX2g023976 | LOC_Os02g15550 | Os02g0254700 | - | Detail |
| C2H2g17278 | 2:8,079,081-8,088,006 | - | C1H2g18691 | CX2g021174 | LOC_Os02g15580 | Os02g0255000 | OsCNGC1 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |