| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g28511 | 3:29,678,395-29,684,235 | + | C2H3g01139 | CX3g026186 | LOC_Os03g55760 | Os03g0766500 | - | Detail |
| C1H3g11551 | 3:29,687,040-29,690,346 | + | C2H3g02791 | CX3g026597 | LOC_Os03g55784 | Os03g0766900 | - | Detail |
| C1H3g16165 | 3:29,702,028-29,705,343 | - | C2H3g02036 | CX3g026749 | LOC_Os03g55820 | Os03g0767500 | - | Detail |
| C1H3g20103 | 3:29,709,048-29,710,559 | + | C2H3g17261 | - | LOC_Os03g55830 | Os03g0767600 | - | Detail |
| C1H3g10730 | 3:29,710,969-29,712,911 | + | C2H3g25481 | CX3g027804 | LOC_Os03g55830 | Os03g0767600 | - | Detail |
| C1H3g31861 | 3:29,715,687-29,718,113 | + | C2H3g21501 | CX3g028593 | LOC_Os03g55850 | Os03g0767800 | - | Detail |
| C1H3g14127 | 3:29,719,059-29,719,939 | + | C2H3g01498 | CX3g024946 | LOC_Os03g55870 | Os03g0767900 | - | Detail |
| C1H3g26336 | 3:29,727,918-29,732,100 | - | C2H3g08266 | CX3g028693 | LOC_Os03g55890 | Os03g0769000 | - | Detail |
| C1H3g24628 | 3:29,739,501-29,744,230 | - | C2H3g19989 | CX3g027389 | LOC_Os03g55920 | Os03g0769050 | - | Detail |
| C1H3g25789 | 3:29,745,160-29,746,665 | - | C2H3g27533 | CX3g028168 | LOC_Os03g55930 | Os03g0769100 | - | Detail |
| C1H3g19145 | 3:29,754,537-29,758,327 | + | C2H3g12948 | CX3g028504 | LOC_Os03g55950 | Os03g0769400 | - | Detail |
| C1H3g25186 | 3:29,761,091-29,763,906 | - | C2H3g22257 | CX3g028565 | LOC_Os03g55970 | Os03g0769600 | - | Detail |
| C1H3g09664 | 3:29,781,351-29,781,905 | + | C2H3g01939 | CX3g028075 | LOC_Os03g56010 | Os03g0770000 | - | Detail |
| C1H3g00630 | 3:29,783,961-29,784,704 | + | - | - | - | - | - | Detail |
| C1H3g17718 | 3:29,792,098-29,793,860 | + | C2H3g30222 | CX3g030368 | LOC_Os03g56020 | Os03g0770100 | - | Detail |
| C1H3g16948 | 3:29,820,097-29,824,011 | + | C2H3g30157 | CX3g030242 | LOC_Os03g56050 | Os03g0770700 | - | Detail |
| C1H3g26645 | 3:29,826,799-29,830,856 | - | C2H3g09554 | CX3g030133 | LOC_Os03g56060 | Os03g0770800 | OsCSLC9 | Detail |
| C1H3g03394 | 3:29,839,102-29,841,454 | - | C2H3g10825 | CX3g029202 | LOC_Os03g56070 | Os03g0770900 | - | Detail |
| C1H3g11674 | 3:29,853,307-29,854,565 | - | C2H3g08836 | CX3g029828 | LOC_Os03g56090 | Os03g0771100 | OsMYB36c | Detail |
| C1H3g05785 | 3:29,865,263-29,870,473 | + | C2H3g08036 | CX3g025561 | LOC_Os03g56110 | Os03g0771500 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H7g11193 | 7:3,175,891-3,177,843 | - | C1H7g30359 | CX7g047617 | LOC_Os07g06960 | Os07g0163900 | - | Detail |
| C2H7g12803 | 7:3,178,494-3,183,889 | - | C1H7g13389 | CX7g046501 | LOC_Os07g06970 | Os07g0164000 | WAF1, waf1, waf1-1, waf1-2, HEN1 | Detail |
| C2H7g02116 | 7:3,185,221-3,194,275 | - | C1H7g24937 | CX7g046855 | LOC_Os07g06980 | Os07g0164100 | HDA704 | Detail |
| C2H7g08721 | 7:3,194,478-3,194,771 | + | C1H7g12322 | CX7g048709 | LOC_Os07g06990 | Os07g0164200 | - | Detail |
| C2H7g16406 | 7:3,194,886-3,195,576 | + | C1H7g12322 | CX7g048709 | LOC_Os07g06990 | Os07g0164200 | - | Detail |
| C2H7g19812 | 7:3,195,656-3,199,648 | - | C1H7g16672 | CX7g048627 | LOC_Os07g07000 | Os07g0164300 | OsSYP131a | Detail |
| C2H7g13004 | 7:3,202,448-3,205,688 | + | C1H7g03242 | CX7g047735 | LOC_Os07g07010 | Os07g0164500 | - | Detail |
| C2H7g29770 | 7:3,208,046-3,210,019 | + | C1H7g21914 | CX7g048909 | LOC_Os07g07020 | Os07g0164600 | - | Detail |
| C2H7g22158 | 7:3,212,250-3,214,460 | + | C1H7g10253 | CX7g050369 | LOC_Os07g07040 | Os07g0164800 | - | Detail |
| C2H7g29990 | 7:3,215,031-3,222,121 | - | C1H7g18807 | CX7g048267 | LOC_Os07g07050 | Os07g0164900 | - | Detail |
| C2H7g08797 | 7:3,224,526-3,230,641 | + | C1H7g00647 | CX7g048340 | LOC_Os07g07060 | Os07g0165000 | - | Detail |
| C2H7g24346 | 7:3,231,168-3,234,272 | - | C1H7g27659 | CX7g049088 | LOC_Os07g07070 | Os07g0165100 | - | Detail |
| C2H7g29244 | 7:3,237,129-3,244,460 | - | C1H7g00683 | CX7g049607 | LOC_Os07g07080 | Os07g0165200 | - | Detail |
| C2H7g00854 | 7:3,281,773-3,287,001 | - | - | CX7g050377 | LOC_Os07g07150 | Os07g0165700 | - | Detail |
| C2H7g28945 | 7:3,287,059-3,287,353 | - | - | - | LOC_Os07g07150 | Os07g0165700 | - | Detail |
| C2H7g13387 | 7:3,287,614-3,289,154 | + | - | CX7g047019 | - | - | - | Detail |
| C2H7g28487 | 7:3,293,764-3,294,854 | + | C1H7g08593 | CX7g046732 | LOC_Os07g07170 | Os07g0165900 | - | Detail |
| C2H7g29026 | 7:3,334,793-3,337,037 | + | C1H7g01183 | CX7g049710 | - | - | - | Detail |
| C2H7g16909 | 7:3,343,754-3,346,553 | + | C1H7g23721 | CX7g049551 | - | - | - | Detail |
| C2H7g11374 | 7:3,360,503-3,361,994 | - | C1H7g05391 | CX7g049569 | LOC_Os07g06930 | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |