| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g21651 | 3:29,491,122-29,491,529 | + | C2H3g23566 | CX3g025152 | LOC_Os07g02460 | Os03g0206400 | - | Detail |
| C1H3g30412 | 3:29,493,098-29,497,408 | - | C2H3g21236 | CX3g028267 | LOC_Os03g55450 | Os03g0762700 | - | Detail |
| C1H3g31602 | 3:29,507,666-29,511,887 | + | C2H3g28904 | CX3g027974 | LOC_Os03g55470 | Os03g0762900 | - | Detail |
| C1H3g12054 | 3:29,515,446-29,519,574 | + | C2H3g20218 | CX3g028419 | LOC_Os03g55490 | Os03g0763000 | - | Detail |
| C1H3g10528 | 3:29,542,717-29,545,299 | + | C2H3g15832 | CX3g027285 | LOC_Os03g55530 | Os03g0764000 | GSE3 | Detail |
| C1H3g07992 | 3:29,558,212-29,565,388 | - | C2H3g26472 | CX3g027062 | LOC_Os03g55560 | Os03g0764300 | OstMAPKKK5 | Detail |
| C1H3g05042 | 3:29,563,740-29,565,161 | + | - | CX3g031219 | - | Os03g0764250 | - | Detail |
| C1H3g08783 | 3:29,571,598-29,578,524 | + | C2H3g25717 | CX3g027539 | LOC_Os03g55570 | Os03g0764550 | - | Detail |
| C1H3g17565 | 3:29,587,778-29,589,926 | + | C2H3g13812 | CX3g029766 | LOC_Os03g55590 | Os03g0764600 | OsHHO3 | Detail |
| C1H3g10682 | 3:29,595,065-29,600,114 | + | C2H3g16680 | CX3g030582 | LOC_Os03g55600 | Os03g0764800 | SAPK8, OsSAPK8 | Detail |
| C1H3g29826 | 3:29,617,138-29,619,779 | + | C2H3g01981 | CX3g027424 | LOC_Os03g55620 | Os03g0765000 | - | Detail |
| C1H3g07713 | 3:29,621,338-29,624,205 | + | C2H3g10671 | CX3g029687 | LOC_Os03g55630 | Os03g0765100 | - | Detail |
| C1H3g24709 | 3:29,624,611-29,627,445 | - | C2H3g01497 | CX3g025964 | LOC_Os03g55640 | Os03g0765200 | - | Detail |
| C1H3g19260 | 3:29,634,253-29,637,768 | - | C2H3g05267 | CX3g030762 | LOC_Os03g55660 | Os03g0765400 | - | Detail |
| C1H3g01103 | 3:29,638,504-29,638,797 | - | C2H3g21899 | CX3g030135 | LOC_Os03g55670 | Os03g0765500 | - | Detail |
| C1H3g21398 | 3:29,638,851-29,640,204 | - | C2H3g10178 | CX3g030135 | LOC_Os03g55670 | - | - | Detail |
| C1H3g25450 | 3:29,641,672-29,642,685 | - | C2H3g20680 | CX3g030205 | LOC_Os03g55680 | Os03g0765500 | - | Detail |
| C1H3g27991 | 3:29,661,338-29,664,957 | - | C2H3g07544 | CX3g026492 | LOC_Os03g55730 | Os03g0766000 | - | Detail |
| C1H3g09378 | 3:29,666,999-29,667,235 | - | - | - | - | - | - | Detail |
| C1H3g10434 | 3:29,667,596-29,667,880 | - | C2H3g07544 | CX3g026492 | LOC_Os03g55734 | Os03g0766200 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H7g03978 | 7:16,265,756-16,267,489 | + | C1H7g29473 | - | - | Os07g0520100 | - | Detail |
| C2H7g21781 | 7:16,267,652-16,269,435 | + | C1H7g29473 | CX7g047337 | LOC_Os07g33580 | Os07g0519600 | - | Detail |
| C2H7g13318 | 7:16,277,231-16,278,793 | + | C1H7g28223 | CX7g047748 | LOC_Os07g33620 | Os07g0520300 | - | Detail |
| C2H7g21473 | 7:16,279,497-16,285,394 | - | C1H7g04488 | CX7g047305 | LOC_Os07g33630 | Os07g0520400 | - | Detail |
| C2H7g11394 | 7:16,295,883-16,298,709 | + | C1H7g21133 | CX7g050007 | LOC_Os07g33650 | Os07g0520600 | - | Detail |
| C2H7g28390 | 7:16,302,637-16,304,014 | + | C1H7g11660 | CX7g047881 | LOC_Os07g33660 | Os07g0520800 | - | Detail |
| C2H7g15083 | 7:16,304,417-16,312,133 | - | C1H7g12953 | CX7g048773 | LOC_Os07g33670 | Os07g0520900 | - | Detail |
| C2H7g02910 | 7:16,316,915-16,318,599 | + | C1H7g29152 | CX7g049903 | LOC_Os07g33680 | Os07g0521000 | - | Detail |
| C2H7g21898 | 7:16,327,177-16,334,408 | - | C1H7g25306 | CX7g047073 | LOC_Os07g33710 | Os07g0521300 | - | Detail |
| C2H7g03885 | 7:16,334,250-16,338,854 | + | C1H7g06894 | CX7g047073 | LOC_Os07g33720 | Os07g0521500 | - | Detail |
| C2H7g19677 | 7:16,361,652-16,362,684 | + | C1H7g04129 | - | - | Os07g0522500 | OsABCG43, PDR5, OsABCG43/PDR5 | Detail |
| C2H7g24068 | 7:16,364,082-16,374,928 | + | C1H7g00552 | CX7g050306 | LOC_Os07g33780 | Os07g0522500 | OsABCG43, PDR5, OsABCG43/PDR5 | Detail |
| C2H7g04624 | 7:16,377,057-16,381,976 | + | C1H7g27726 | CX7g048983 | LOC_Os07g33790 | Os07g0522600 | - | Detail |
| C2H7g03065 | 7:16,397,396-16,400,307 | + | C1H7g19851 | CX7g046173 | LOC_Os07g33850 | Os07g0522900 | - | Detail |
| C2H7g11079 | 7:16,411,373-16,415,445 | + | C1H7g11159 | CX7g049510 | LOC_Os07g33997 | Os07g0523500 | - | Detail |
| C2H7g01918 | 7:16,419,127-16,421,248 | - | C1H7g27843 | CX7g046394 | LOC_Os07g33954 | Os07g0523600 | - | Detail |
| C2H7g05091 | 7:16,438,888-16,439,878 | + | C1H7g23168 | CX7g047458 | LOC_Os07g34020 | Os07g0524000 | - | Detail |
| C2H7g25455 | 7:16,451,672-16,457,797 | + | C1H7g08538 | CX7g049956 | LOC_Os07g34030 | Os07g0524100 | - | Detail |
| C2H7g05767 | 7:16,473,611-16,475,420 | - | C1H7g04570 | CX7g048327 | LOC_Os07g34070 | Os07g0524900 | - | Detail |
| C2H7g20767 | 7:16,485,034-16,487,791 | - | C1H7g03935 | CX7g047450 | LOC_Os07g34110 | Os07g0525100 | OsCLIP | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |