| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g28211 | 3:29,218,817-29,222,059 | + | - | - | LOC_Os03g51340 | - | - | Detail |
| C1H3g12860 | 3:29,222,202-29,222,736 | + | - | - | - | - | - | Detail |
| C1H3g20524 | 3:29,225,331-29,225,960 | + | C2H3g13706 | CX3g026521 | LOC_Os03g55010 | Os03g0757200 | - | Detail |
| C1H3g18325 | 3:29,227,752-29,228,597 | + | C2H3g16997 | CX3g025853 | LOC_Os03g55010 | Os03g0757200 | - | Detail |
| C1H3g15265 | 3:29,238,857-29,242,067 | + | C2H3g11257 | CX3g028049 | LOC_Os03g55010 | Os03g0757200 | - | Detail |
| C1H3g28838 | 3:29,243,450-29,245,279 | + | C2H3g25803 | CX3g028049 | LOC_Os03g55020 | Os03g0757100 | - | Detail |
| C1H3g16314 | 3:29,245,467-29,246,990 | + | C2H3g12902 | CX3g028049 | LOC_Os03g55040 | Os03g0757500 | GSA1 | Detail |
| C1H3g22534 | 3:29,248,856-29,250,300 | + | C2H3g07075 | CX3g028049 | LOC_Os03g55050 | Os03g0757600 | - | Detail |
| C1H3g18474 | 3:29,265,338-29,266,780 | + | C2H3g15309 | CX3g031235 | LOC_Os03g55070 | Os03g0757900 | - | Detail |
| C1H3g02197 | 3:29,272,322-29,275,300 | - | C2H3g28463 | CX3g026009 | LOC_Os03g55080 | Os03g0758050 | - | Detail |
| C1H3g12323 | 3:29,280,290-29,287,456 | - | C2H3g07139 | CX3g028301 | LOC_Os03g55090 | Os03g0758100 | OsPho1 | Detail |
| C1H3g03734 | 3:29,290,583-29,295,880 | + | C2H3g19977 | CX3g028780 | LOC_Os03g55100 | Os03g0758300 | OsCNGC14 | Detail |
| C1H3g12190 | 3:29,308,896-29,311,909 | + | C2H3g18083 | CX3g025340 | LOC_Os03g55110 | Os03g0758400 | - | Detail |
| C1H3g12511 | 3:29,314,022-29,314,659 | - | C2H3g16234 | CX3g025542 | LOC_Os03g55120 | Os03g0758500 | - | Detail |
| C1H3g28552 | 3:29,329,376-29,336,032 | + | C2H3g10389 | CX3g030315 | LOC_Os03g55130 | Os03g0758600 | - | Detail |
| C1H3g29486 | 3:29,336,736-29,341,218 | + | C2H3g16550 | CX3g029765 | LOC_Os03g55140 | Os03g0758700 | - | Detail |
| C1H3g11985 | 3:29,343,238-29,345,484 | + | C2H3g15196 | CX3g027861 | LOC_Os03g55150 | Os03g0758800 | OseIF5A-2 | Detail |
| C1H3g25907 | 3:29,346,203-29,349,137 | + | C2H3g06066 | CX3g030192 | LOC_Os03g55164 | Os03g0758900 | - | Detail |
| C1H3g02522 | 3:29,350,447-29,351,082 | + | C2H3g18373 | CX3g030258 | LOC_Os03g55164 | Os03g0758950 | OsWRKY4 | Detail |
| C1H3g14505 | 3:29,351,141-29,353,889 | + | C2H3g20753 | CX3g030258 | LOC_Os03g55164 | Os03g0758950 | OsWRKY4 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g07965 | 4:8,062,836-8,064,398 | - | C1H4g18604 | CX4g034799 | LOC_Os04g15800 | Os04g0228100 | - | Detail |
| C2H4g27879 | 4:8,068,673-8,069,465 | + | - | - | - | - | - | Detail |
| C2H4g13857 | 4:8,071,384-8,073,190 | + | - | - | LOC_Os04g15820 | Os04g0228300 | - | Detail |
| C2H4g30466 | 4:8,082,123-8,083,022 | + | C1H4g11154 | CX4g032333 | LOC_Os04g15840 | Os04g0228400 | - | Detail |
| C2H4g10956 | 4:8,129,279-8,129,864 | + | - | CX4g036521 | - | Os04g0280700 | - | Detail |
| C2H4g04987 | 4:8,160,953-8,162,712 | + | C1H4g10435 | CX4g032650 | LOC_Os04g15920 | Os04g0229100 | - | Detail |
| C2H4g16212 | 4:8,290,542-8,292,317 | - | C1H4g12432 | CX4g035418 | LOC_Os04g16450 | Os04g0233400 | - | Detail |
| C2H4g27955 | 4:8,334,179-8,334,888 | - | C1H4g05686 | CX4g031918 | - | - | - | Detail |
| C2H4g26981 | 4:8,336,886-8,337,494 | - | C1H4g27994 | CX4g032553 | LOC_Os04g16670 | Os04g0234500 | - | Detail |
| C2H4g10242 | 4:8,340,036-8,342,543 | - | C1H4g21505 | CX4g033851 | LOC_Os04g16680 | Os04g0234600 | - | Detail |
| C2H4g16796 | 4:8,470,714-8,478,041 | + | C1H4g06530 | CX4g036392 | LOC_Os04g17050 | Os04g0244400 | - | Detail |
| C2H4g15471 | 4:8,478,938-8,487,788 | + | C1H4g03282 | CX4g033261 | LOC_Os04g17064 | Os04g0244500 | - | Detail |
| C2H4g22629 | 4:8,494,007-8,494,760 | - | C1H4g00844 | CX4g033837 | LOC_Os04g17100 | Os04g0244800 | - | Detail |
| C2H4g17703 | 4:8,691,688-8,698,494 | - | C1H4g07475 | CX4g033363 | LOC_Os04g24430 | Os04g0249500 | OsSUS7 | Detail |
| C2H4g28644 | 4:8,711,104-8,713,395 | - | C1H4g12276 | CX4g032666 | LOC_Os04g17660 | Os04g0249600 | STR6, OsHAC1;2, OsStr6, OsRhST, RLD | Detail |
| C2H4g18602 | 4:8,798,311-8,799,029 | + | C1H4g04096 | CX4g036578 | LOC_Os04g17700 | Os04g0250700 | - | Detail |
| C2H4g00428 | 4:8,799,890-8,804,869 | + | C1H4g19970 | CX4g036578 | LOC_Os04g24410 | Os04g0250700 | - | Detail |
| C2H4g09941 | 4:8,811,613-8,819,692 | - | C1H4g10578 | CX4g035388 | - | Os04g0251825 | - | Detail |
| C2H4g01240 | 4:8,958,261-8,985,476 | - | C1H4g05815 | CX4g036369 | LOC_Os04g18010 | Os04g0252200 | - | Detail |
| C2H4g12300 | 4:9,000,326-9,017,068 | - | C1H4g20695 | CX4g034469 | LOC_Os04g18030 | Os04g0252400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |