| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g28211 | 3:29,218,817-29,222,059 | + | - | - | LOC_Os03g51340 | - | - | Detail |
| C1H3g12860 | 3:29,222,202-29,222,736 | + | - | - | - | - | - | Detail |
| C1H3g20524 | 3:29,225,331-29,225,960 | + | C2H3g13706 | CX3g026521 | LOC_Os03g55010 | Os03g0757200 | - | Detail |
| C1H3g18325 | 3:29,227,752-29,228,597 | + | C2H3g16997 | CX3g025853 | LOC_Os03g55010 | Os03g0757200 | - | Detail |
| C1H3g15265 | 3:29,238,857-29,242,067 | + | C2H3g11257 | CX3g028049 | LOC_Os03g55010 | Os03g0757200 | - | Detail |
| C1H3g28838 | 3:29,243,450-29,245,279 | + | C2H3g25803 | CX3g028049 | LOC_Os03g55020 | Os03g0757100 | - | Detail |
| C1H3g16314 | 3:29,245,467-29,246,990 | + | C2H3g12902 | CX3g028049 | LOC_Os03g55040 | Os03g0757500 | GSA1 | Detail |
| C1H3g22534 | 3:29,248,856-29,250,300 | + | C2H3g07075 | CX3g028049 | LOC_Os03g55050 | Os03g0757600 | - | Detail |
| C1H3g18474 | 3:29,265,338-29,266,780 | + | C2H3g15309 | CX3g031235 | LOC_Os03g55070 | Os03g0757900 | - | Detail |
| C1H3g02197 | 3:29,272,322-29,275,300 | - | C2H3g28463 | CX3g026009 | LOC_Os03g55080 | Os03g0758050 | - | Detail |
| C1H3g12323 | 3:29,280,290-29,287,456 | - | C2H3g07139 | CX3g028301 | LOC_Os03g55090 | Os03g0758100 | OsPho1 | Detail |
| C1H3g03734 | 3:29,290,583-29,295,880 | + | C2H3g19977 | CX3g028780 | LOC_Os03g55100 | Os03g0758300 | OsCNGC14 | Detail |
| C1H3g12190 | 3:29,308,896-29,311,909 | + | C2H3g18083 | CX3g025340 | LOC_Os03g55110 | Os03g0758400 | - | Detail |
| C1H3g12511 | 3:29,314,022-29,314,659 | - | C2H3g16234 | CX3g025542 | LOC_Os03g55120 | Os03g0758500 | - | Detail |
| C1H3g28552 | 3:29,329,376-29,336,032 | + | C2H3g10389 | CX3g030315 | LOC_Os03g55130 | Os03g0758600 | - | Detail |
| C1H3g29486 | 3:29,336,736-29,341,218 | + | C2H3g16550 | CX3g029765 | LOC_Os03g55140 | Os03g0758700 | - | Detail |
| C1H3g11985 | 3:29,343,238-29,345,484 | + | C2H3g15196 | CX3g027861 | LOC_Os03g55150 | Os03g0758800 | OseIF5A-2 | Detail |
| C1H3g25907 | 3:29,346,203-29,349,137 | + | C2H3g06066 | CX3g030192 | LOC_Os03g55164 | Os03g0758900 | - | Detail |
| C1H3g02522 | 3:29,350,447-29,351,082 | + | C2H3g18373 | CX3g030258 | LOC_Os03g55164 | Os03g0758950 | OsWRKY4 | Detail |
| C1H3g14505 | 3:29,351,141-29,353,889 | + | C2H3g20753 | CX3g030258 | LOC_Os03g55164 | Os03g0758950 | OsWRKY4 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g29726 | 9:17,780,620-17,783,032 | - | C1H9g18045 | CX9g058091 | LOC_Os09g36360 | Os09g0534000 | - | Detail |
| C2H9g06995 | 9:17,786,587-17,790,379 | + | C1H9g14355 | CX9g055858 | LOC_Os09g36370 | Os09g0534200 | - | Detail |
| C2H9g24532 | 9:17,795,110-17,797,840 | + | C1H9g04179 | CX9g058141 | LOC_Os09g36440 | Os09g0534800 | - | Detail |
| C2H9g26686 | 9:17,799,433-17,802,786 | - | C1H9g22452 | CX9g055137 | LOC_Os09g36450 | Os09g0535000 | - | Detail |
| C2H9g12415 | 9:17,803,763-17,806,894 | + | C1H9g27668 | CX9g057768 | LOC_Os09g36460 | Os09g0535100 | - | Detail |
| C2H9g19017 | 9:17,811,989-17,814,876 | + | C1H9g23309 | CX9g056220 | LOC_Os09g36470 | Os09g0535200 | - | Detail |
| C2H9g02266 | 9:17,815,861-17,818,770 | + | C1H9g30113 | CX9g056638 | LOC_Os09g36480 | Os09g0535300 | - | Detail |
| C2H9g18632 | 9:17,826,392-17,827,405 | - | C1H9g02156 | CX9g055022 | LOC_Os09g36520 | Os09g0535900 | - | Detail |
| C2H9g08077 | 9:17,833,313-17,837,352 | - | C1H9g18132 | CX9g057534 | LOC_Os09g36530 | Os09g0536000 | - | Detail |
| C2H9g01597 | 9:17,848,085-17,849,838 | + | C1H9g23828 | CX9g055542 | LOC_Os09g36560 | Os09g0536300 | - | Detail |
| C2H9g27916 | 9:17,861,065-17,863,339 | + | C1H9g17095 | CX9g056300 | LOC_Os09g36580 | Os09g0536400 | - | Detail |
| C2H9g02676 | 9:17,869,987-17,873,375 | - | C1H9g11028 | CX9g057416 | LOC_Os09g36600 | Os09g0536700 | - | Detail |
| C2H9g02330 | 9:17,884,473-17,887,022 | + | C1H9g06888 | CX9g057733 | LOC_Os09g36670 | Os09g0537600 | - | Detail |
| C2H9g11788 | 9:17,888,726-17,891,134 | - | C1H9g14336 | CX9g057345 | LOC_Os09g36680 | Os09g0537700 | RNS4, OsRNS4, OsRRP, RNaseDIS | Detail |
| C2H9g24881 | 9:17,896,514-17,898,965 | - | C1H9g12593 | CX9g055095 | LOC_Os09g36700 | Os09g0538000 | - | Detail |
| C2H9g25356 | 9:17,901,374-17,903,543 | + | C1H9g12194 | CX9g057133 | LOC_Os09g36710 | Os09g0538200 | - | Detail |
| C2H9g08114 | 9:17,918,713-17,919,889 | - | C1H9g31173 | CX9g055420 | LOC_Os09g36730 | Os09g0538400 | OsMYB108 | Detail |
| C2H9g01669 | 9:17,926,216-17,926,659 | - | C1H9g22212 | CX9g056101 | LOC_Os09g36735 | Os09g0538450 | - | Detail |
| C2H9g03742 | 9:17,927,008-17,928,875 | + | C1H9g15664 | CX9g057786 | LOC_Os09g36740 | Os09g0538500 | MS5 | Detail |
| C2H9g08362 | 9:17,929,360-17,933,409 | - | C1H9g23441 | CX9g056628 | LOC_Os09g36750 | Os09g0538600 | APX9 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |