| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g28211 | 3:29,218,817-29,222,059 | + | - | - | LOC_Os03g51340 | - | - | Detail |
| C1H3g12860 | 3:29,222,202-29,222,736 | + | - | - | - | - | - | Detail |
| C1H3g20524 | 3:29,225,331-29,225,960 | + | C2H3g13706 | CX3g026521 | LOC_Os03g55010 | Os03g0757200 | - | Detail |
| C1H3g18325 | 3:29,227,752-29,228,597 | + | C2H3g16997 | CX3g025853 | LOC_Os03g55010 | Os03g0757200 | - | Detail |
| C1H3g15265 | 3:29,238,857-29,242,067 | + | C2H3g11257 | CX3g028049 | LOC_Os03g55010 | Os03g0757200 | - | Detail |
| C1H3g28838 | 3:29,243,450-29,245,279 | + | C2H3g25803 | CX3g028049 | LOC_Os03g55020 | Os03g0757100 | - | Detail |
| C1H3g16314 | 3:29,245,467-29,246,990 | + | C2H3g12902 | CX3g028049 | LOC_Os03g55040 | Os03g0757500 | GSA1 | Detail |
| C1H3g22534 | 3:29,248,856-29,250,300 | + | C2H3g07075 | CX3g028049 | LOC_Os03g55050 | Os03g0757600 | - | Detail |
| C1H3g18474 | 3:29,265,338-29,266,780 | + | C2H3g15309 | CX3g031235 | LOC_Os03g55070 | Os03g0757900 | - | Detail |
| C1H3g02197 | 3:29,272,322-29,275,300 | - | C2H3g28463 | CX3g026009 | LOC_Os03g55080 | Os03g0758050 | - | Detail |
| C1H3g12323 | 3:29,280,290-29,287,456 | - | C2H3g07139 | CX3g028301 | LOC_Os03g55090 | Os03g0758100 | OsPho1 | Detail |
| C1H3g03734 | 3:29,290,583-29,295,880 | + | C2H3g19977 | CX3g028780 | LOC_Os03g55100 | Os03g0758300 | OsCNGC14 | Detail |
| C1H3g12190 | 3:29,308,896-29,311,909 | + | C2H3g18083 | CX3g025340 | LOC_Os03g55110 | Os03g0758400 | - | Detail |
| C1H3g12511 | 3:29,314,022-29,314,659 | - | C2H3g16234 | CX3g025542 | LOC_Os03g55120 | Os03g0758500 | - | Detail |
| C1H3g28552 | 3:29,329,376-29,336,032 | + | C2H3g10389 | CX3g030315 | LOC_Os03g55130 | Os03g0758600 | - | Detail |
| C1H3g29486 | 3:29,336,736-29,341,218 | + | C2H3g16550 | CX3g029765 | LOC_Os03g55140 | Os03g0758700 | - | Detail |
| C1H3g11985 | 3:29,343,238-29,345,484 | + | C2H3g15196 | CX3g027861 | LOC_Os03g55150 | Os03g0758800 | OseIF5A-2 | Detail |
| C1H3g25907 | 3:29,346,203-29,349,137 | + | C2H3g06066 | CX3g030192 | LOC_Os03g55164 | Os03g0758900 | - | Detail |
| C1H3g02522 | 3:29,350,447-29,351,082 | + | C2H3g18373 | CX3g030258 | LOC_Os03g55164 | Os03g0758950 | OsWRKY4 | Detail |
| C1H3g14505 | 3:29,351,141-29,353,889 | + | C2H3g20753 | CX3g030258 | LOC_Os03g55164 | Os03g0758950 | OsWRKY4 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g00999 | 1:23,689,204-23,696,602 | + | C1H1g24345 | CX1g000702 | LOC_Os01g46700 | Os01g0655300 | SDG705, OsSDG705 | Detail |
| C2H1g28065 | 1:23,699,226-23,705,202 | - | C1H1g19947 | CX1g003368 | LOC_Os01g46710 | Os01g0655400 | - | Detail |
| C2H1g30387 | 1:23,709,236-23,714,872 | + | C1H1g28980 | - | LOC_Os01g46720 | Os01g0655500 | - | Detail |
| C2H1g10347 | 1:23,737,348-23,745,276 | + | C1H1g06509 | CX1g005157 | LOC_Os01g46750 | Os01g0655800 | - | Detail |
| C2H1g08099 | 1:23,756,376-23,757,278 | + | C1H1g10344 | CX1g001306 | LOC_Os01g46760 | Os01g0656200 | OsPP2C8 | Detail |
| C2H1g01219 | 1:23,758,274-23,761,574 | + | C1H1g10344 | CX1g001306 | LOC_Os01g46760 | Os01g0656200 | OsPP2C8 | Detail |
| C2H1g14070 | 1:23,770,009-23,771,223 | - | C1H1g15601 | CX1g006460 | LOC_Os01g46800 | Os01g0656400 | - | Detail |
| C2H1g24475 | 1:23,783,797-23,790,491 | - | C1H1g28624 | CX1g005546 | LOC_Os01g46810 | Os01g0656600 | - | Detail |
| C2H1g08798 | 1:23,798,198-23,802,207 | + | C1H1g31021 | CX1g002002 | LOC_Os01g46840 | Os01g0656900 | - | Detail |
| C2H1g22347 | 1:23,802,991-23,805,034 | + | C1H1g21539 | CX1g004768 | LOC_Os01g46850 | Os01g0657000 | - | Detail |
| C2H1g08096 | 1:23,805,743-23,807,503 | - | C1H1g07661 | CX1g000538 | LOC_Os01g46860 | Os01g0657100 | PT11, OsPT11, PHT1-11, OsPht1;11, ORYsa;PHT1;11 | Detail |
| C2H1g24228 | 1:23,842,659-23,845,481 | - | C1H1g13139 | CX1g006603 | LOC_Os01g46926 | Os01g0658400 | UBC5A, OsUBC5a, OsUBC14, UBC14 | Detail |
| C2H1g04871 | 1:23,846,527-23,850,261 | - | C1H1g10996 | CX1g000846 | LOC_Os01g46932 | Os01g0658500 | - | Detail |
| C2H1g09647 | 1:23,851,709-23,853,102 | + | C1H1g26752 | CX1g005848 | LOC_Os01g46940 | Os01g0658600 | - | Detail |
| C2H1g29071 | 1:23,853,214-23,857,312 | - | C1H1g21735 | CX1g001447 | LOC_Os01g46950 | Os01g0658700 | - | Detail |
| C2H1g04805 | 1:23,861,989-23,865,157 | - | C1H1g14446 | CX1g002678 | LOC_Os01g46970 | Os01g0658900 | OSBZ8 | Detail |
| C2H1g26234 | 1:23,875,172-23,879,755 | + | C1H1g08063 | CX1g006783 | LOC_Os01g46980 | Os01g0659200 | OsVHA-E1, GPA8 | Detail |
| C2H1g17847 | 1:23,917,994-23,920,288 | + | C1H1g17216 | CX1g000172 | LOC_Os01g47050 | Os01g0659900 | OsFBK1 | Detail |
| C2H1g22853 | 1:23,921,971-23,924,322 | + | - | - | - | - | - | Detail |
| C2H1g14071 | 1:23,928,057-23,928,230 | + | C1H1g27341 | CX1g005495 | LOC_Os01g47070 | Os01g0660200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |