| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g11162 | 3:28,942,521-28,952,434 | - | C2H3g22149 | CX3g031238 | LOC_Os03g53880 | Os03g0749800 | - | Detail |
| C1H3g23610 | 3:28,952,669-28,954,097 | + | C2H3g15338 | CX3g030383 | LOC_Os03g53890 | Os03g0749900 | - | Detail |
| C1H3g03771 | 3:28,954,733-28,955,042 | - | C2H3g01456 | CX3g029891 | LOC_Os03g53900 | Os03g0305400 | OsUSP3 | Detail |
| C1H3g04362 | 3:28,955,086-28,955,559 | - | C2H3g01456 | CX3g029891 | LOC_Os03g53900 | Os03g0750000 | - | Detail |
| C1H3g05432 | 3:28,956,506-28,959,788 | - | C2H3g29736 | - | LOC_Os03g53910 | Os03g0750100 | - | Detail |
| C1H3g04679 | 3:28,967,017-28,975,335 | + | C2H3g18037 | CX3g029217 | LOC_Os03g53920 | Os03g0750300 | - | Detail |
| C1H3g27629 | 3:28,981,332-28,983,833 | - | C2H3g28860 | CX3g026013 | LOC_Os03g53950 | Os03g0750700 | - | Detail |
| C1H3g16169 | 3:28,988,871-28,994,656 | - | C2H3g13208 | CX3g028825 | LOC_Os03g53960 | Os03g0750800 | - | Detail |
| C1H3g17674 | 3:28,995,345-28,997,798 | - | C2H3g05622 | CX3g025807 | LOC_Os03g53970 | Os03g0750900 | - | Detail |
| C1H3g30640 | 3:29,000,380-29,001,178 | + | C2H3g27227 | CX3g029898 | LOC_Os03g53980 | Os03g0751000 | - | Detail |
| C1H3g24232 | 3:29,002,393-29,003,257 | - | C2H3g03528 | CX3g026633 | LOC_Os03g54910 | Os03g0221500 | - | Detail |
| C1H3g23380 | 3:29,005,065-29,009,686 | + | C2H3g12979 | CX3g029143 | LOC_Os03g53990 | Os03g0751050 | - | Detail |
| C1H3g12600 | 3:29,010,681-29,014,454 | - | C2H3g03358 | CX3g026203 | LOC_Os03g54000 | Os03g0751100 | - | Detail |
| C1H3g23388 | 3:29,021,406-29,026,794 | + | C2H3g04810 | CX3g028609 | LOC_Os03g54040 | Os03g0751400 | - | Detail |
| C1H3g07489 | 3:29,032,194-29,033,905 | + | C2H3g04305 | CX3g027092 | LOC_Os03g54050 | Os03g0751600 | - | Detail |
| C1H3g19762 | 3:29,042,680-29,048,070 | + | C2H3g09716 | CX3g030127 | LOC_Os03g54084 | Os03g0752100 | PHYC | Detail |
| C1H3g25474 | 3:29,048,583-29,052,457 | + | C2H3g05209 | CX3g031059 | LOC_Os03g54091 | Os03g0752200 | OsSPO11-1, OsTOP6A1 | Detail |
| C1H3g21048 | 3:29,053,913-29,054,721 | - | C2H3g18265 | CX3g026511 | LOC_Os03g54100 | Os03g0752300 | TPKA, TPKa, OsTPKa | Detail |
| C1H3g03067 | 3:29,062,539-29,063,964 | + | C2H3g06363 | CX3g025106 | LOC_Os03g54130 | Os03g0752500 | - | Detail |
| C1H3g23694 | 3:29,065,391-29,069,538 | + | C2H3g21077 | CX3g030009 | LOC_Os03g54150 | Os03g0752700 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H10g29699 | 10:20,791,117-20,793,940 | - | C1H10g06746 | CX10g009164 | LOC_Os10g42670 | Os10g0577500 | - | Detail |
| C2H10g08892 | 10:20,805,684-20,811,848 | + | C1H10g31645 | CX10g008764 | LOC_Os10g42690 | Os10g0577600 | JMJ706, OsJMJ706 | Detail |
| C2H10g27016 | 10:20,812,510-20,815,466 | + | C1H10g14987 | CX10g010066 | LOC_Os10g42700 | Os10g0577700 | OsSKL2 | Detail |
| C2H10g24367 | 10:20,815,717-20,820,099 | - | C1H10g23628 | CX10g010135 | LOC_Os10g42710 | Os10g0577800 | - | Detail |
| C2H10g07701 | 10:20,824,551-20,835,508 | + | C1H10g21723 | CX10g010103 | LOC_Os10g42724 | Os10g0577900 | - | Detail |
| C2H10g18587 | 10:20,837,168-20,840,659 | + | C1H10g26397 | CX10g010562 | LOC_Os10g42750 | Os10g0578200 | CSLD1, csld1, OsCSLD1, OsCslD1 | Detail |
| C2H10g04816 | 10:20,841,194-20,847,277 | - | C1H10g25859 | CX10g010728 | LOC_Os10g42760 | Os10g0578500 | - | Detail |
| C2H10g19346 | 10:20,847,679-20,848,881 | - | C1H10g11786 | CX10g008658 | LOC_Os10g42770 | Os10g0578600 | - | Detail |
| C2H10g30298 | 10:20,851,233-20,852,407 | - | C1H10g13039 | CX10g009161 | LOC_Os10g42780 | - | - | Detail |
| C2H10g04603 | 10:20,853,820-20,856,134 | - | C1H10g15526 | CX10g009309 | LOC_Os10g42790 | Os10g0578900 | - | Detail |
| C2H10g04695 | 10:20,857,441-20,860,797 | - | C1H10g26403 | CX10g007359 | LOC_Os10g42800 | Os10g0578950 | - | Detail |
| C2H10g04207 | 10:20,862,584-20,868,534 | - | C1H10g14176 | CX10g010221 | LOC_Os10g42820 | Os10g0579100 | OsOSCA1.4 | Detail |
| C2H10g11370 | 10:20,863,683-20,878,921 | + | - | - | - | Os10g0579250 | - | Detail |
| C2H10g03091 | 10:20,870,239-20,874,972 | - | C1H10g14851 | CX10g008885 | LOC_Os10g42830 | Os10g0579200 | OsXTPH2 | Detail |
| C2H10g15540 | 10:20,875,964-20,878,538 | - | C1H10g30780 | CX10g010006 | LOC_Os10g42840 | Os10g0579300 | - | Detail |
| C2H10g26468 | 10:20,882,461-20,883,462 | + | C1H10g26861 | - | LOC_Os10g42850 | Os10g0579400 | OsWRKY2 | Detail |
| C2H10g10820 | 10:20,886,344-20,888,820 | - | C1H10g25914 | CX10g008313 | LOC_Os10g42860 | Os10g0579500 | - | Detail |
| C2H10g08407 | 10:20,889,443-20,892,669 | + | C1H10g24306 | CX10g009587 | LOC_Os10g42870 | Os10g0579600 | OsNPF7.7, OsNPF7.7-2, OsPTR10 | Detail |
| C2H10g19327 | 10:20,898,820-20,900,992 | + | C1H10g03551 | CX10g010311 | LOC_Os10g42900 | Os10g0579800 | - | Detail |
| C2H10g02204 | 10:20,903,090-20,905,244 | + | C1H10g13290 | CX10g009642 | LOC_Os10g42940 | Os10g0580200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |