| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g21044 | 3:28,407,285-28,411,963 | + | C2H3g05635 | CX3g026362 | LOC_Os03g52840 | Os03g0738400 | - | Detail |
| C1H3g07947 | 3:28,426,568-28,430,229 | + | C2H3g05845 | CX3g025013 | LOC_Os03g52860 | Os03g0738600 | LOX-L2, OsLOX-L2, LOX1.1, LOX L-2, OsLOX2 | Detail |
| C1H3g24267 | 3:28,436,712-28,439,660 | + | C2H3g02923 | CX3g030893 | LOC_Os03g52880 | Os03g0738900 | - | Detail |
| C1H3g14490 | 3:28,448,580-28,450,347 | + | C2H3g01404 | CX3g028113 | LOC_Os03g52910 | Os03g0739700 | - | Detail |
| C1H3g22532 | 3:28,479,943-28,483,987 | + | C2H3g15580 | CX3g026120 | LOC_Os03g52970 | Os03g0740600 | - | Detail |
| C1H3g30167 | 3:28,484,903-28,489,513 | + | C2H3g17064 | CX3g027471 | LOC_Os03g52980 | Os03g0740700 | - | Detail |
| C1H3g01871 | 3:28,493,632-28,496,160 | + | C2H3g00686 | CX3g027476 | LOC_Os03g53000 | Os03g0740800 | - | Detail |
| C1H3g26768 | 3:28,496,541-28,500,749 | + | C2H3g21662 | - | - | - | - | Detail |
| C1H3g08757 | 3:28,507,086-28,509,286 | + | C2H3g06591 | CX3g029988 | LOC_Os03g53020 | Os03g0741100 | OsbHLH148 | Detail |
| C1H3g07900 | 3:28,523,241-28,526,391 | + | C2H3g29971 | CX3g029674 | LOC_Os03g53050 | Os03g0741400 | - | Detail |
| C1H3g12278 | 3:28,532,123-28,533,453 | - | C2H3g23101 | - | - | Os03g0741525 | - | Detail |
| C1H3g27808 | 3:28,544,091-28,544,348 | + | C2H3g26390 | CX3g026540 | - | - | - | Detail |
| C1H3g17107 | 3:28,546,837-28,551,431 | - | C2H3g15523 | CX3g028122 | LOC_Os03g53080 | Os03g0741700 | - | Detail |
| C1H3g25937 | 3:28,551,328-28,551,737 | + | C2H3g20852 | - | - | - | - | Detail |
| C1H3g11146 | 3:28,559,552-28,560,637 | + | C2H3g21579 | CX3g030571 | LOC_Os03g53100 | Os03g0742300 | - | Detail |
| C1H3g09898 | 3:28,561,931-28,566,717 | - | C2H3g18927 | CX3g025479 | LOC_Os03g53110 | Os03g0742400 | - | Detail |
| C1H3g03745 | 3:28,574,781-28,575,712 | + | C2H3g26757 | CX3g029167 | - | - | - | Detail |
| C1H3g23529 | 3:28,576,537-28,582,153 | + | C2H3g15149 | CX3g030577 | LOC_Os03g53140 | Os03g0742800 | - | Detail |
| C1H3g12201 | 3:28,581,074-28,583,176 | - | C2H3g27219 | CX3g026971 | LOC_Os03g53150 | Os03g0742900 | - | Detail |
| C1H3g22035 | 3:28,584,836-28,585,219 | + | C2H3g13028 | - | - | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H11g18515 | 11:24,041,663-24,042,220 | + | C1H11g03521 | CX11g012285 | LOC_Os11g44800 | Os11g0670900 | - | Detail |
| C2H11g27080 | 11:24,045,208-24,046,656 | - | C1H11g31627 | CX11g012522 | LOC_Os11g44810 | Os11g0671000 | OsDRM1 | Detail |
| C2H11g23513 | 11:24,060,676-24,063,641 | + | C1H11g03521 | CX11g012285 | LOC_Os11g44860 | Os11g0672200 | - | Detail |
| C2H11g26063 | 11:24,065,188-24,066,519 | + | C1H11g12664 | CX11g013596 | - | - | - | Detail |
| C2H11g25079 | 11:24,068,564-24,071,341 | + | C1H11g06806 | CX11g012393 | LOC_Os11g44870 | Os11g0672300 | - | Detail |
| C2H11g22308 | 11:24,072,825-24,078,927 | - | C1H11g05558 | CX11g012777 | LOC_Os11g44880 | Os11g0672400 | - | Detail |
| C2H11g18596 | 11:24,082,434-24,087,021 | - | C1H11g16900 | CX11g012486 | LOC_Os11g44910 | Os11g0672700 | OsRecQ1 | Detail |
| C2H11g20362 | 11:24,096,058-24,097,104 | + | C1H11g18066 | CX11g013627 | LOC_Os11g44920 | Os11g0672900 | - | Detail |
| C2H11g03717 | 11:24,103,639-24,105,204 | - | C1H11g30199 | CX11g013337 | LOC_Os11g44930 | Os11g0673000 | - | Detail |
| C2H11g24024 | 11:24,105,828-24,108,072 | - | C1H11g04720 | CX11g012032 | LOC_Os11g44940 | Os11g0673100 | OsPM27, PM27 | Detail |
| C2H11g28693 | 11:24,108,912-24,115,249 | - | C1H11g09031 | CX11g011434 | LOC_Os11g44950 | Os11g0673200 | TIPS-11-9 | Detail |
| C2H11g18810 | 11:24,127,925-24,131,148 | - | C1H11g20206 | CX11g014464 | - | Os11g0464600 | - | Detail |
| C2H11g26104 | 11:24,146,687-24,149,782 | + | C1H11g20646 | CX11g014485 | LOC_Os11g45190 | Os11g0677101 | - | Detail |
| C2H11g29362 | 11:24,157,430-24,160,474 | + | C1H11g10190 | CX11g014137 | LOC_Os11g44970 | Os11g0673900 | - | Detail |
| C2H11g13137 | 11:24,165,307-24,168,411 | + | C1H11g20646 | CX11g014485 | LOC_Os11g45180 | Os11g0676100 | - | Detail |
| C2H11g04141 | 11:24,180,226-24,186,830 | + | C1H11g29249 | CX11g014485 | LOC_Os11g45190 | Os11g0676200 | - | Detail |
| C2H11g12146 | 11:24,188,612-24,189,248 | + | - | - | - | - | - | Detail |
| C2H11g10628 | 11:24,216,177-24,221,776 | + | C1H11g20646 | CX11g014485 | LOC_Os11g45190 | Os11g0676200 | - | Detail |
| C2H11g01211 | 11:24,226,857-24,228,005 | - | C1H11g29873 | CX11g011995 | LOC_Os11g45210 | - | - | Detail |
| C2H11g23498 | 11:24,231,759-24,233,141 | - | - | CX11g013225 | LOC_Os11g45220 | Os11g0677400 | OsPMEI43 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |