| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g21044 | 3:28,407,285-28,411,963 | + | C2H3g05635 | CX3g026362 | LOC_Os03g52840 | Os03g0738400 | - | Detail |
| C1H3g07947 | 3:28,426,568-28,430,229 | + | C2H3g05845 | CX3g025013 | LOC_Os03g52860 | Os03g0738600 | LOX-L2, OsLOX-L2, LOX1.1, LOX L-2, OsLOX2 | Detail |
| C1H3g24267 | 3:28,436,712-28,439,660 | + | C2H3g02923 | CX3g030893 | LOC_Os03g52880 | Os03g0738900 | - | Detail |
| C1H3g14490 | 3:28,448,580-28,450,347 | + | C2H3g01404 | CX3g028113 | LOC_Os03g52910 | Os03g0739700 | - | Detail |
| C1H3g22532 | 3:28,479,943-28,483,987 | + | C2H3g15580 | CX3g026120 | LOC_Os03g52970 | Os03g0740600 | - | Detail |
| C1H3g30167 | 3:28,484,903-28,489,513 | + | C2H3g17064 | CX3g027471 | LOC_Os03g52980 | Os03g0740700 | - | Detail |
| C1H3g01871 | 3:28,493,632-28,496,160 | + | C2H3g00686 | CX3g027476 | LOC_Os03g53000 | Os03g0740800 | - | Detail |
| C1H3g26768 | 3:28,496,541-28,500,749 | + | C2H3g21662 | - | - | - | - | Detail |
| C1H3g08757 | 3:28,507,086-28,509,286 | + | C2H3g06591 | CX3g029988 | LOC_Os03g53020 | Os03g0741100 | OsbHLH148 | Detail |
| C1H3g07900 | 3:28,523,241-28,526,391 | + | C2H3g29971 | CX3g029674 | LOC_Os03g53050 | Os03g0741400 | - | Detail |
| C1H3g12278 | 3:28,532,123-28,533,453 | - | C2H3g23101 | - | - | Os03g0741525 | - | Detail |
| C1H3g27808 | 3:28,544,091-28,544,348 | + | C2H3g26390 | CX3g026540 | - | - | - | Detail |
| C1H3g17107 | 3:28,546,837-28,551,431 | - | C2H3g15523 | CX3g028122 | LOC_Os03g53080 | Os03g0741700 | - | Detail |
| C1H3g25937 | 3:28,551,328-28,551,737 | + | C2H3g20852 | - | - | - | - | Detail |
| C1H3g11146 | 3:28,559,552-28,560,637 | + | C2H3g21579 | CX3g030571 | LOC_Os03g53100 | Os03g0742300 | - | Detail |
| C1H3g09898 | 3:28,561,931-28,566,717 | - | C2H3g18927 | CX3g025479 | LOC_Os03g53110 | Os03g0742400 | - | Detail |
| C1H3g03745 | 3:28,574,781-28,575,712 | + | C2H3g26757 | CX3g029167 | - | - | - | Detail |
| C1H3g23529 | 3:28,576,537-28,582,153 | + | C2H3g15149 | CX3g030577 | LOC_Os03g53140 | Os03g0742800 | - | Detail |
| C1H3g12201 | 3:28,581,074-28,583,176 | - | C2H3g27219 | CX3g026971 | LOC_Os03g53150 | Os03g0742900 | - | Detail |
| C1H3g22035 | 3:28,584,836-28,585,219 | + | C2H3g13028 | - | - | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g09608 | 9:2,383,965-2,385,716 | + | C1H9g31813 | CX9g057837 | LOC_Os09g05030 | Os09g0135800 | - | Detail |
| C2H9g13689 | 9:2,388,974-2,393,648 | - | C1H9g09075 | CX9g057815 | LOC_Os09g05020 | Os09g0135700 | OsPFA-DSP1 | Detail |
| C2H9g25128 | 9:2,399,882-2,400,166 | + | C1H9g05034 | CX9g055083 | - | - | - | Detail |
| C2H9g20182 | 9:2,402,910-2,405,273 | - | C1H9g26448 | CX9g056472 | LOC_Os09g04990 | Os09g0135400 | - | Detail |
| C2H9g20248 | 9:2,511,129-2,516,106 | - | C1H9g29941 | CX9g057145 | LOC_Os09g06230 | Os09g0237600 | - | Detail |
| C2H9g17568 | 9:2,589,369-2,590,927 | + | C1H9g27131 | CX9g056399 | - | Os09g0238700 | - | Detail |
| C2H9g04344 | 9:2,670,230-2,670,607 | - | C1H9g30047 | CX9g058127 | LOC_Os09g06464 | Os09g0240200 | OsCO3, OsB | Detail |
| C2H9g08709 | 9:2,685,307-2,686,106 | - | C1H9g01256 | CX9g057395 | LOC_Os09g06464 | Os09g0240200 | OsCO3, OsB | Detail |
| C2H9g08035 | 9:2,715,498-2,730,075 | + | C1H9g12815 | CX9g055492 | LOC_Os09g06499 | Os09g0240500 | - | Detail |
| C2H9g10911 | 9:2,763,650-2,769,114 | + | C1H9g19247 | CX9g057748 | LOC_Os09g06560 | Os09g0241100 | DRW1, OsDRW1 | Detail |
| C2H9g13622 | 9:2,782,049-2,783,323 | + | C1H9g07378 | CX9g057838 | LOC_Os09g06620 | Os09g0241550 | - | Detail |
| C2H9g26568 | 9:2,798,356-2,799,595 | + | C1H9g07378 | CX9g055884 | LOC_Os09g06660 | Os09g0242000 | - | Detail |
| C2H9g29727 | 9:2,813,328-2,814,963 | + | C1H9g30365 | CX9g055283 | LOC_Os09g06680 | Os09g0242300 | CDC20.3 | Detail |
| C2H9g24215 | 9:2,841,495-2,844,829 | + | C1H9g09820 | CX9g056368 | - | - | - | Detail |
| C2H9g03371 | 9:2,860,439-2,860,930 | + | - | CX9g057868 | LOC_Os09g06740 | Os09g0242800 | - | Detail |
| C2H9g28835 | 9:2,880,359-2,880,589 | - | - | CX9g056904 | LOC_Os09g06750 | Os09g0243000 | - | Detail |
| C2H9g03755 | 9:2,890,354-2,890,980 | + | C1H9g03583 | CX9g056548 | - | - | - | Detail |
| C2H9g27222 | 9:2,910,252-2,910,719 | + | - | CX9g057152 | LOC_Os09g06770 | Os09g0243200 | - | Detail |
| C2H9g23154 | 9:2,956,839-2,959,844 | + | - | CX9g055480 | LOC_Os09g06890 | - | - | Detail |
| C2H9g26973 | 9:2,975,086-2,978,196 | - | - | - | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |