| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g21044 | 3:28,407,285-28,411,963 | + | C2H3g05635 | CX3g026362 | LOC_Os03g52840 | Os03g0738400 | - | Detail |
| C1H3g07947 | 3:28,426,568-28,430,229 | + | C2H3g05845 | CX3g025013 | LOC_Os03g52860 | Os03g0738600 | LOX-L2, OsLOX-L2, LOX1.1, LOX L-2, OsLOX2 | Detail |
| C1H3g24267 | 3:28,436,712-28,439,660 | + | C2H3g02923 | CX3g030893 | LOC_Os03g52880 | Os03g0738900 | - | Detail |
| C1H3g14490 | 3:28,448,580-28,450,347 | + | C2H3g01404 | CX3g028113 | LOC_Os03g52910 | Os03g0739700 | - | Detail |
| C1H3g22532 | 3:28,479,943-28,483,987 | + | C2H3g15580 | CX3g026120 | LOC_Os03g52970 | Os03g0740600 | - | Detail |
| C1H3g30167 | 3:28,484,903-28,489,513 | + | C2H3g17064 | CX3g027471 | LOC_Os03g52980 | Os03g0740700 | - | Detail |
| C1H3g01871 | 3:28,493,632-28,496,160 | + | C2H3g00686 | CX3g027476 | LOC_Os03g53000 | Os03g0740800 | - | Detail |
| C1H3g26768 | 3:28,496,541-28,500,749 | + | C2H3g21662 | - | - | - | - | Detail |
| C1H3g08757 | 3:28,507,086-28,509,286 | + | C2H3g06591 | CX3g029988 | LOC_Os03g53020 | Os03g0741100 | OsbHLH148 | Detail |
| C1H3g07900 | 3:28,523,241-28,526,391 | + | C2H3g29971 | CX3g029674 | LOC_Os03g53050 | Os03g0741400 | - | Detail |
| C1H3g12278 | 3:28,532,123-28,533,453 | - | C2H3g23101 | - | - | Os03g0741525 | - | Detail |
| C1H3g27808 | 3:28,544,091-28,544,348 | + | C2H3g26390 | CX3g026540 | - | - | - | Detail |
| C1H3g17107 | 3:28,546,837-28,551,431 | - | C2H3g15523 | CX3g028122 | LOC_Os03g53080 | Os03g0741700 | - | Detail |
| C1H3g25937 | 3:28,551,328-28,551,737 | + | C2H3g20852 | - | - | - | - | Detail |
| C1H3g11146 | 3:28,559,552-28,560,637 | + | C2H3g21579 | CX3g030571 | LOC_Os03g53100 | Os03g0742300 | - | Detail |
| C1H3g09898 | 3:28,561,931-28,566,717 | - | C2H3g18927 | CX3g025479 | LOC_Os03g53110 | Os03g0742400 | - | Detail |
| C1H3g03745 | 3:28,574,781-28,575,712 | + | C2H3g26757 | CX3g029167 | - | - | - | Detail |
| C1H3g23529 | 3:28,576,537-28,582,153 | + | C2H3g15149 | CX3g030577 | LOC_Os03g53140 | Os03g0742800 | - | Detail |
| C1H3g12201 | 3:28,581,074-28,583,176 | - | C2H3g27219 | CX3g026971 | LOC_Os03g53150 | Os03g0742900 | - | Detail |
| C1H3g22035 | 3:28,584,836-28,585,219 | + | C2H3g13028 | - | - | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g00820 | 6:6,583,960-6,584,247 | - | - | CX6g045581 | LOC_Os06g13880 | Os06g0248600 | - | Detail |
| C2H6g25851 | 6:6,603,918-6,604,187 | - | - | CX6g044916 | LOC_Os06g13940 | Os06g0249350 | - | Detail |
| C2H6g28001 | 6:6,608,549-6,610,363 | - | C1H6g07126 | CX6g043542 | LOC_Os06g13950 | Os06g0249500 | - | Detail |
| C2H6g11841 | 6:6,615,679-6,616,815 | + | C1H6g16654 | CX6g044057 | LOC_Os06g13850 | Os06g0250000 | - | Detail |
| C2H6g16019 | 6:6,638,604-6,639,848 | + | C1H6g08977 | CX6g041203 | LOC_Os06g13850 | Os06g0250000 | - | Detail |
| C2H6g21355 | 6:6,644,176-6,644,697 | - | C1H6g21869 | CX6g042088 | LOC_Os06g14010 | Os06g0250760 | Os2R_MYB65 | Detail |
| C2H6g16577 | 6:6,648,799-6,652,672 | - | C1H6g15145 | CX6g041993 | LOC_Os06g14030 | Os06g0250600 | OsK5.2, OsGORK | Detail |
| C2H6g18184 | 6:6,655,441-6,655,821 | - | C1H6g15145 | CX6g041993 | LOC_Os06g14030 | Os06g0250600 | OsK5.2, OsGORK | Detail |
| C2H6g01341 | 6:6,675,053-6,679,314 | + | C1H6g24584 | CX6g045653 | LOC_Os06g14040 | Os06g0251000 | - | Detail |
| C2H6g22915 | 6:6,684,688-6,689,666 | + | C1H6g28686 | CX6g042967 | LOC_Os06g14050 | Os06g0251100 | - | Detail |
| C2H6g19452 | 6:6,690,715-6,691,773 | - | - | CX6g041672 | LOC_Os06g14060 | Os06g0251200 | - | Detail |
| C2H6g09328 | 6:6,695,323-6,700,652 | - | C1H6g13751 | CX6g044338 | LOC_Os06g14080 | Os06g0251700 | - | Detail |
| C2H6g15352 | 6:6,745,465-6,748,824 | - | C1H6g28179 | CX6g043756 | LOC_Os06g14190 | Os06g0252300 | - | Detail |
| C2H6g12983 | 6:6,757,145-6,758,095 | + | - | CX6g042245 | LOC_Os06g14220 | Os06g0252800 | - | Detail |
| C2H6g05409 | 6:6,762,754-6,763,194 | - | C1H6g20600 | CX6g043415 | LOC_Os06g14240 | Os06g0253100 | - | Detail |
| C2H6g09652 | 6:6,767,785-6,769,965 | - | C1H6g00451 | CX6g045801 | LOC_Os06g14260 | Os06g0210400 | - | Detail |
| C2H6g21444 | 6:6,774,946-6,778,401 | - | C1H6g19993 | CX6g045801 | LOC_Os06g14280 | Os06g0253600 | - | Detail |
| C2H6g13498 | 6:6,780,882-6,781,115 | - | - | - | - | - | - | Detail |
| C2H6g15526 | 6:6,785,379-6,787,154 | + | C1H6g15145 | CX6g042545 | LOC_Os06g14310 | Os06g0254200 | - | Detail |
| C2H6g16027 | 6:6,787,481-6,790,645 | - | C1H6g19242 | - | LOC_Os06g14324 | Os06g0254300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |