| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g05748 | 3:28,131,029-28,135,020 | - | C2H3g17794 | CX3g028410 | LOC_Os03g52180 | Os03g0732000 | OsIspH2 | Detail |
| C1H3g07434 | 3:28,157,029-28,166,582 | + | C2H3g20028 | CX3g027773 | LOC_Os03g52239 | Os03g0732100 | ROSES1 | Detail |
| C1H3g11344 | 3:28,175,978-28,177,371 | - | C2H3g11203 | CX3g025156 | LOC_Os03g52280 | Os03g0733000 | - | Detail |
| C1H3g21763 | 3:28,189,063-28,191,231 | - | C2H3g04619 | CX3g026785 | LOC_Os03g52310 | Os03g0733400 | - | Detail |
| C1H3g23506 | 3:28,195,123-28,198,970 | - | C2H3g09605 | CX3g025961 | LOC_Os03g52320 | Os03g0733600 | OsGIF1, MKB3 | Detail |
| C1H3g07461 | 3:28,215,087-28,218,718 | - | C2H3g27935 | CX3g025745 | LOC_Os03g52340 | Os03g0733800 | OsERO1, OsEro1 | Detail |
| C1H3g05494 | 3:28,219,060-28,219,769 | - | C2H3g27141 | CX3g025745 | LOC_Os03g52340 | Os03g0733800 | OsERO1, OsEro1 | Detail |
| C1H3g23554 | 3:28,225,622-28,225,986 | + | C2H3g09869 | CX3g030687 | LOC_Os03g52360 | Os03g0734000 | - | Detail |
| C1H3g05445 | 3:28,229,476-28,229,850 | + | C2H3g10253 | CX3g025126 | LOC_Os03g52370 | Os03g0734100 | - | Detail |
| C1H3g04075 | 3:28,230,785-28,231,164 | + | C2H3g03601 | CX3g030269 | LOC_Os03g52380 | Os03g0734200 | - | Detail |
| C1H3g13317 | 3:28,232,620-28,232,968 | + | C2H3g04628 | CX3g028713 | LOC_Os03g52390 | Os03g0734300 | - | Detail |
| C1H3g23948 | 3:28,240,405-28,245,081 | - | C2H3g18785 | CX3g025429 | LOC_Os03g52430 | Os03g0734700 | - | Detail |
| C1H3g00521 | 3:28,249,444-28,254,003 | - | C2H3g00406 | CX3g025463 | LOC_Os03g52450 | Os03g0734900 | - | Detail |
| C1H3g04061 | 3:28,254,438-28,259,246 | - | C2H3g22726 | CX3g028629 | LOC_Os03g52460 | Os03g0735000 | - | Detail |
| C1H3g26718 | 3:28,255,210-28,255,978 | + | - | - | - | Os03g0735025 | - | Detail |
| C1H3g23423 | 3:28,261,902-28,266,895 | + | C2H3g20865 | CX3g025816 | LOC_Os03g52470 | Os03g0735100 | - | Detail |
| C1H3g03226 | 3:28,265,312-28,265,786 | - | - | - | - | Os03g0735150 | - | Detail |
| C1H3g22763 | 3:28,267,614-28,269,101 | - | C2H3g09114 | CX3g028779 | LOC_Os03g52475 | Os03g0735200 | - | Detail |
| C1H3g28384 | 3:28,272,368-28,275,961 | - | C2H3g10977 | CX3g030925 | LOC_Os03g52490 | Os03g0735300 | - | Detail |
| C1H3g06992 | 3:28,280,737-28,281,234 | + | C2H3g04119 | CX3g030643 | - | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H12g17563 | 12:1,772,735-1,773,138 | + | C1H12g29309 | CX12g018607 | LOC_Os12g06020 | Os12g0156400 | OsDCP1 | Detail |
| C2H12g28591 | 12:1,773,575-1,774,434 | + | C1H12g27986 | CX12g015145 | LOC_Os12g02640 | Os12g0512800 | - | Detail |
| C2H12g17026 | 12:1,775,487-1,776,546 | + | C1H12g02118 | CX12g015145 | LOC_Os12g04424 | Os12g0138800 | - | Detail |
| C2H12g16805 | 12:1,777,189-1,778,856 | + | C1H12g08849 | CX12g016675 | LOC_Os12g04424 | Os12g0138800 | - | Detail |
| C2H12g26667 | 12:1,779,770-1,785,705 | + | C1H12g04455 | CX12g018579 | LOC_Os12g04440 | Os12g0138900 | - | Detail |
| C2H12g06048 | 12:1,786,870-1,790,049 | + | C1H12g26225 | CX12g018280 | LOC_Os12g04460 | Os12g0139100 | - | Detail |
| C2H12g06757 | 12:1,795,677-1,799,009 | - | C1H12g06694 | CX12g016143 | LOC_Os12g04480 | Os12g0139300 | OsCPD2, CYP90A4, OsCPD2/CYP90A4 | Detail |
| C2H12g06221 | 12:1,805,313-1,807,869 | - | C1H12g15530 | CX12g017687 | LOC_Os12g04510 | Os12g0139500 | - | Detail |
| C2H12g02892 | 12:1,809,503-1,813,926 | - | C1H12g28135 | CX12g016258 | LOC_Os12g04520 | Os12g0139600 | - | Detail |
| C2H12g30338 | 12:1,817,591-1,819,959 | - | C1H12g25083 | CX12g018085 | LOC_Os12g04540 | Os12g0139800 | - | Detail |
| C2H12g21252 | 12:1,820,565-1,826,090 | - | C1H12g25083 | - | LOC_Os11g04760 | Os11g0143700 | - | Detail |
| C2H12g09288 | 12:1,826,611-1,827,957 | + | C1H11g09971 | CX12g018203 | LOC_Os12g04580 | Os12g0140050 | - | Detail |
| C2H12g17577 | 12:1,827,973-1,828,521 | + | C1H11g05185 | CX12g017583 | LOC_Os11g04790 | - | - | Detail |
| C2H12g06925 | 12:1,829,528-1,829,758 | + | C1H11g19404 | CX12g018621 | LOC_Os12g04570 | Os12g0140000 | - | Detail |
| C2H12g08204 | 12:1,830,589-1,830,897 | + | C1H11g09971 | CX12g018203 | LOC_Os12g04580 | Os12g0140050 | - | Detail |
| C2H12g20924 | 12:1,833,353-1,833,952 | - | C1H12g21714 | CX12g016311 | LOC_Os12g04590 | Os12g0140200 | - | Detail |
| C2H12g11565 | 12:1,835,785-1,840,903 | - | C1H12g21714 | CX12g015881 | LOC_Os12g04595 | Os12g0140266 | - | Detail |
| C2H12g27898 | 12:1,843,775-1,846,042 | - | C1H12g21714 | CX12g017939 | LOC_Os12g04610 | Os12g0140300 | - | Detail |
| C2H12g28124 | 12:1,848,806-1,851,504 | - | - | - | LOC_Os12g02610 | - | - | Detail |
| C2H12g29989 | 12:1,853,957-1,855,518 | + | C1H12g30903 | CX12g018613 | LOC_Os12g04640 | Os12g0514000 | OsPLT15 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |