| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g27418 | 1:17,413,631-17,420,934 | + | C2H1g21312 | CX1g005208 | LOC_Os08g09860 | - | - | Detail |
| C1H1g28314 | 1:17,443,733-17,444,303 | + | C2H1g17187 | CX1g003392 | LOC_Os01g33670 | Os01g0520500 | - | Detail |
| C1H1g02683 | 1:17,445,295-17,450,504 | - | C2H1g08242 | CX1g006219 | LOC_Os01g33684 | Os01g0520600 | - | Detail |
| C1H1g27816 | 1:17,476,223-17,477,466 | + | - | CX1g001522 | LOC_Os01g33762 | Os04g0228300 | - | Detail |
| C1H1g04217 | 1:17,498,928-17,506,747 | + | C2H1g00800 | CX1g002325 | LOC_Os01g33784 | Os01g0521400 | - | Detail |
| C1H1g30357 | 1:17,510,328-17,520,815 | + | C2H1g26145 | CX1g001131 | LOC_Os01g33800 | Os01g0521500 | - | Detail |
| C1H1g25202 | 1:17,537,078-17,538,135 | + | C2H1g21205 | CX1g005107 | LOC_Os01g33910 | Os01g0522100 | - | Detail |
| C1H1g08450 | 1:17,556,024-17,559,721 | + | C2H1g18568 | CX1g005107 | LOC_Os01g33930 | Os01g0522950 | - | Detail |
| C1H1g10941 | 1:17,562,380-17,563,337 | + | C2H1g11782 | CX1g006523 | LOC_Os01g33950 | Os01g0523100 | - | Detail |
| C1H1g21896 | 1:17,564,801-17,565,783 | + | C2H1g11782 | CX1g006523 | LOC_Os01g33950 | Os01g0523100 | - | Detail |
| C1H1g09014 | 1:17,573,170-17,581,097 | + | C2H1g13197 | CX1g005107 | LOC_Os01g34000 | Os01g0524100 | ESA1 | Detail |
| C1H1g03031 | 1:17,609,485-17,611,145 | + | C2H1g22021 | CX1g000293 | LOC_Os01g34060 | Os01g0863300 | - | Detail |
| C1H1g05337 | 1:17,624,574-17,635,162 | + | C2H1g01344 | CX1g003083 | LOC_Os01g34080 | Os01g0524700 | - | Detail |
| C1H1g08661 | 1:17,704,268-17,705,104 | + | C2H1g28979 | - | - | - | - | Detail |
| C1H1g01010 | 1:17,706,879-17,709,624 | + | C2H1g17057 | CX1g002923 | LOC_Os01g34190 | Os01g0526100 | - | Detail |
| C1H1g10979 | 1:17,710,839-17,714,130 | + | C2H1g19688 | CX1g003716 | LOC_Os01g34200 | Os01g0526200 | - | Detail |
| C1H1g28687 | 1:17,745,595-17,761,416 | + | C2H1g06550 | CX1g006793 | LOC_Os01g34330 | Os01g0527400 | - | Detail |
| C1H1g03628 | 1:17,762,560-17,767,791 | - | C2H1g06422 | CX1g000241 | LOC_Os01g34350 | Os01g0527600 | SHL2, shl2, SHL2, sh2, OsRDR6 | Detail |
| C1H1g18093 | 1:17,772,289-17,777,173 | - | C2H1g29503 | CX1g004192 | LOC_Os01g34390 | Os01g0527700 | - | Detail |
| C1H1g30321 | 1:17,779,715-17,791,385 | + | C2H1g02847 | CX1g007113 | LOC_Os01g34430 | Os01g0528000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g03354 | 4:24,370,758-24,379,739 | - | C1H4g11500 | CX4g032075 | LOC_Os04g47700 | Os04g0564700 | - | Detail |
| C2H4g19275 | 4:24,383,055-24,384,449 | + | C1H4g14049 | CX4g034423 | LOC_Os04g47720 | Os04g0565200 | - | Detail |
| C2H4g12702 | 4:24,387,936-24,389,330 | + | C1H4g12974 | CX4g033452 | LOC_Os04g47770 | Os04g0565400 | CZOGT3, OscZOGT3, cZOGT3 | Detail |
| C2H4g08404 | 4:24,390,581-24,391,839 | - | C1H4g31632 | - | - | Os04g0565450 | - | Detail |
| C2H4g19005 | 4:24,393,380-24,394,663 | - | C1H4g26844 | CX4g033372 | LOC_Os04g47780 | Os04g0565500 | - | Detail |
| C2H4g09609 | 4:24,403,227-24,405,410 | - | C1H4g15072 | CX4g033977 | LOC_Os04g47810 | Os04g0565900 | - | Detail |
| C2H4g21812 | 4:24,409,427-24,409,792 | - | - | CX4g032145 | LOC_Os04g47820 | Os04g0566000 | - | Detail |
| C2H4g10718 | 4:24,412,257-24,420,032 | + | C1H4g12877 | CX4g035302 | LOC_Os04g47830 | Os04g0566100 | OsCHR714, CHR714 | Detail |
| C2H4g12035 | 4:24,455,481-24,457,546 | + | C1H4g23807 | CX4g031939 | LOC_Os04g47860 | Os04g0566400 | IDD10, OsIDD10 | Detail |
| C2H4g15154 | 4:24,459,690-24,461,186 | + | C1H4g23807 | CX4g031939 | LOC_Os04g47860 | Os02g0672100 | OsIDD4, SID1 | Detail |
| C2H4g00740 | 4:24,469,974-24,479,404 | - | C1H4g26156 | CX4g034886 | LOC_Os04g47870 | Os04g0566500 | - | Detail |
| C2H4g20556 | 4:24,514,806-24,517,941 | + | C1H4g22653 | CX4g033126 | LOC_Os04g47890 | Os04g0566600 | MOF1, MFS2 | Detail |
| C2H4g16258 | 4:24,522,513-24,523,088 | - | - | CX4g033952 | LOC_Os04g47900 | Os04g0566700 | - | Detail |
| C2H4g14707 | 4:24,527,059-24,537,528 | - | C1H4g17812 | CX4g032363 | LOC_Os04g47912 | Os04g0566800 | - | Detail |
| C2H4g15294 | 4:24,540,750-24,542,539 | - | C1H4g21181 | CX4g031995 | LOC_Os04g47930 | Os04g0567200 | - | Detail |
| C2H4g26180 | 4:24,556,106-24,559,191 | + | C1H4g12555 | CX4g035866 | LOC_Os04g47970 | Os04g0567700 | - | Detail |
| C2H4g30292 | 4:24,567,615-24,569,670 | - | C1H4g18335 | CX4g035043 | LOC_Os04g47990 | Os04g0567800 | OsDOF18 | Detail |
| C2H4g14855 | 4:24,599,448-24,603,311 | + | C1H4g26603 | CX4g033760 | LOC_Os04g48010 | Os04g0568400 | OsKRN2 | Detail |
| C2H4g14653 | 4:24,608,845-24,609,432 | + | C1H4g30299 | CX4g034406 | LOC_Os04g48020 | Os04g0568600 | - | Detail |
| C2H4g13784 | 4:24,610,201-24,611,230 | + | C1H4g25602 | - | LOC_Os04g48030 | Os04g0568700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |