| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g03565 | 3:27,757,241-27,762,050 | - | C2H3g30083 | CX3g030086 | LOC_Os03g51620 | Os03g0726300 | - | Detail |
| C1H3g02226 | 3:27,770,845-27,773,599 | + | C2H3g21290 | CX3g025544 | LOC_Os03g51640 | Os03g0726400 | - | Detail |
| C1H3g17376 | 3:27,774,201-27,779,758 | - | C2H3g14903 | CX3g026178 | LOC_Os03g51650 | Os03g0726500 | - | Detail |
| C1H3g20845 | 3:27,796,136-27,796,740 | - | C2H3g08813 | CX3g028096 | LOC_Os03g51660 | Os03g0726700 | TAC3 | Detail |
| C1H3g06495 | 3:27,798,225-27,803,096 | - | C2H3g26898 | CX3g027385 | LOC_Os03g51670 | Os03g0726800 | - | Detail |
| C1H3g20532 | 3:27,805,979-27,808,428 | - | C2H3g29132 | - | LOC_Os03g51680 | Os03g0726900 | - | Detail |
| C1H3g31203 | 3:27,809,897-27,819,332 | - | C2H3g04769 | CX3g029433 | LOC_Os03g51690 | Os03g0673000 | - | Detail |
| C1H3g28999 | 3:27,834,496-27,836,232 | + | C2H3g17627 | CX3g029277 | LOC_Os03g51700 | Os03g0727100 | - | Detail |
| C1H3g18589 | 3:27,836,841-27,839,340 | - | C2H3g26829 | CX3g027566 | LOC_Os03g51710 | Os03g0673000 | - | Detail |
| C1H3g28804 | 3:27,842,113-27,842,849 | - | C2H3g16078 | CX3g027566 | LOC_Os03g51710 | Os03g0727200 | OSH3 | Detail |
| C1H3g29743 | 3:27,843,063-27,843,350 | - | C2H3g10133 | CX3g029433 | LOC_Os03g51710 | Os03g0727200 | OSH3 | Detail |
| C1H3g10075 | 3:27,866,273-27,868,561 | - | C2H3g07488 | CX3g027050 | LOC_Os03g51740 | Os03g0727600 | ACS1, ACC1*, OsACS1, Os-ACS1, ACC1 | Detail |
| C1H3g08935 | 3:27,895,355-27,902,228 | - | C2H3g29705 | CX3g031106 | LOC_Os03g51790 | Os03g0727900 | - | Detail |
| C1H3g03486 | 3:27,906,842-27,909,468 | + | C2H3g15707 | CX3g025416 | LOC_Os03g51830 | Os03g0728100 | - | Detail |
| C1H3g05198 | 3:27,919,671-27,921,516 | - | C2H3g03478 | CX3g027150 | LOC_Os03g51880 | Os03g0728600 | - | Detail |
| C1H3g06505 | 3:27,927,520-27,927,825 | - | C2H3g14472 | - | LOC_Os03g51890 | - | - | Detail |
| C1H3g18395 | 3:27,931,998-27,939,296 | - | C2H3g03813 | CX3g026995 | LOC_Os03g51890 | - | - | Detail |
| C1H3g26338 | 3:27,941,344-27,943,020 | - | C2H3g06913 | CX3g030922 | LOC_Os03g56630 | Os03g0181600 | - | Detail |
| C1H3g00993 | 3:27,946,183-27,954,698 | + | C2H3g12518 | CX3g028728 | LOC_Os03g51900 | Os03g0728800 | - | Detail |
| C1H3g31891 | 3:27,955,692-27,959,509 | - | C2H3g09824 | CX3g029342 | LOC_Os03g51910 | Os03g0728900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g08007 | 6:15,788,849-15,790,726 | + | C1H6g26484 | CX6g044810 | LOC_Os06g30730 | Os06g0503100 | - | Detail |
| C2H6g13647 | 6:15,811,024-15,812,538 | - | C1H6g14188 | CX6g045929 | LOC_Os06g30710 | Os06g0502900 | - | Detail |
| C2H6g24697 | 6:15,816,173-15,822,291 | + | C1H6g11062 | CX6g041387 | LOC_Os06g30700 | Os06g0502800 | - | Detail |
| C2H6g09315 | 6:15,842,410-15,848,539 | - | C1H6g02542 | - | LOC_Os06g30680 | - | - | Detail |
| C2H6g18333 | 6:15,853,081-15,858,194 | + | - | - | - | - | - | Detail |
| C2H6g23474 | 6:15,876,109-15,876,496 | + | C1H6g04180 | CX6g044832 | LOC_Os06g47320 | Os06g0320850 | - | Detail |
| C2H6g21792 | 6:15,965,694-15,967,631 | - | C1H6g12044 | CX6g044061 | LOC_Os12g41430 | Os12g0607400 | - | Detail |
| C2H6g03410 | 6:16,009,708-16,023,430 | - | C1H6g22494 | CX6g043950 | LOC_Os06g22550 | Os06g0331300 | - | Detail |
| C2H6g28684 | 6:16,094,322-16,094,912 | - | C1H6g25339 | CX1g003326 | LOC_Os11g03280 | Os11g0126500 | - | Detail |
| C2H6g01043 | 6:16,104,898-16,137,450 | - | C1H6g28196 | CX6g044956 | LOC_Os06g30894 | Os06g0505302 | - | Detail |
| C2H6g09051 | 6:16,141,243-16,145,792 | + | C1H6g25110 | CX6g042361 | LOC_Os06g30910 | Os06g0505400 | - | Detail |
| C2H6g22604 | 6:16,149,187-16,151,841 | + | C1H6g24962 | CX6g043862 | - | Os06g0505700 | - | Detail |
| C2H6g18363 | 6:16,181,259-16,183,091 | + | C1H6g31826 | CX6g045779 | LOC_Os06g30930 | Os06g0506000 | - | Detail |
| C2H6g28879 | 6:16,190,673-16,197,517 | - | C1H6g18166 | CX6g043948 | LOC_Os06g30950 | Os06g0506200 | - | Detail |
| C2H6g30190 | 6:16,204,128-16,206,162 | - | C1H6g24322 | CX6g043814 | LOC_Os06g30970 | Os06g0506600 | - | Detail |
| C2H6g19985 | 6:16,236,143-16,242,086 | - | C1H6g06672 | CX6g044531 | LOC_Os06g31100 | Os06g0507400 | - | Detail |
| C2H6g02488 | 6:16,253,245-16,257,635 | - | C1H6g22974 | CX6g042334 | LOC_Os06g31190 | Os06g0507900 | - | Detail |
| C2H6g22299 | 6:16,273,984-16,282,896 | - | C1H6g21530 | CX6g042005 | LOC_Os06g31210 | Os06g0508700 | - | Detail |
| C2H6g09625 | 6:16,283,945-16,286,974 | + | - | CX6g043625 | - | Os06g0508800 | - | Detail |
| C2H6g08484 | 6:16,324,000-16,325,827 | + | C1H6g30789 | CX6g044642 | LOC_Os06g31270 | Os06g0509600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |