| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g03565 | 3:27,757,241-27,762,050 | - | C2H3g30083 | CX3g030086 | LOC_Os03g51620 | Os03g0726300 | - | Detail |
| C1H3g02226 | 3:27,770,845-27,773,599 | + | C2H3g21290 | CX3g025544 | LOC_Os03g51640 | Os03g0726400 | - | Detail |
| C1H3g17376 | 3:27,774,201-27,779,758 | - | C2H3g14903 | CX3g026178 | LOC_Os03g51650 | Os03g0726500 | - | Detail |
| C1H3g20845 | 3:27,796,136-27,796,740 | - | C2H3g08813 | CX3g028096 | LOC_Os03g51660 | Os03g0726700 | TAC3 | Detail |
| C1H3g06495 | 3:27,798,225-27,803,096 | - | C2H3g26898 | CX3g027385 | LOC_Os03g51670 | Os03g0726800 | - | Detail |
| C1H3g20532 | 3:27,805,979-27,808,428 | - | C2H3g29132 | - | LOC_Os03g51680 | Os03g0726900 | - | Detail |
| C1H3g31203 | 3:27,809,897-27,819,332 | - | C2H3g04769 | CX3g029433 | LOC_Os03g51690 | Os03g0673000 | - | Detail |
| C1H3g28999 | 3:27,834,496-27,836,232 | + | C2H3g17627 | CX3g029277 | LOC_Os03g51700 | Os03g0727100 | - | Detail |
| C1H3g18589 | 3:27,836,841-27,839,340 | - | C2H3g26829 | CX3g027566 | LOC_Os03g51710 | Os03g0673000 | - | Detail |
| C1H3g28804 | 3:27,842,113-27,842,849 | - | C2H3g16078 | CX3g027566 | LOC_Os03g51710 | Os03g0727200 | OSH3 | Detail |
| C1H3g29743 | 3:27,843,063-27,843,350 | - | C2H3g10133 | CX3g029433 | LOC_Os03g51710 | Os03g0727200 | OSH3 | Detail |
| C1H3g10075 | 3:27,866,273-27,868,561 | - | C2H3g07488 | CX3g027050 | LOC_Os03g51740 | Os03g0727600 | ACS1, ACC1*, OsACS1, Os-ACS1, ACC1 | Detail |
| C1H3g08935 | 3:27,895,355-27,902,228 | - | C2H3g29705 | CX3g031106 | LOC_Os03g51790 | Os03g0727900 | - | Detail |
| C1H3g03486 | 3:27,906,842-27,909,468 | + | C2H3g15707 | CX3g025416 | LOC_Os03g51830 | Os03g0728100 | - | Detail |
| C1H3g05198 | 3:27,919,671-27,921,516 | - | C2H3g03478 | CX3g027150 | LOC_Os03g51880 | Os03g0728600 | - | Detail |
| C1H3g06505 | 3:27,927,520-27,927,825 | - | C2H3g14472 | - | LOC_Os03g51890 | - | - | Detail |
| C1H3g18395 | 3:27,931,998-27,939,296 | - | C2H3g03813 | CX3g026995 | LOC_Os03g51890 | - | - | Detail |
| C1H3g26338 | 3:27,941,344-27,943,020 | - | C2H3g06913 | CX3g030922 | LOC_Os03g56630 | Os03g0181600 | - | Detail |
| C1H3g00993 | 3:27,946,183-27,954,698 | + | C2H3g12518 | CX3g028728 | LOC_Os03g51900 | Os03g0728800 | - | Detail |
| C1H3g31891 | 3:27,955,692-27,959,509 | - | C2H3g09824 | CX3g029342 | LOC_Os03g51910 | Os03g0728900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g14338 | 5:23,868,931-23,876,697 | - | C1H5g07868 | CX5g037010 | LOC_Os05g49590 | Os05g0571000 | - | Detail |
| C2H5g15890 | 5:23,882,860-23,884,392 | + | C1H5g09249 | CX5g038156 | LOC_Os05g49610 | Os05g0571100 | - | Detail |
| C2H5g15353 | 5:23,890,748-23,891,029 | + | C1H5g06315 | CX5g039972 | LOC_Os05g49620 | Os05g0571200 | OsWRKY19 | Detail |
| C2H5g11276 | 5:23,891,281-23,891,796 | + | C1H5g19986 | CX5g039972 | LOC_Os05g49620 | Os05g0571200 | OsWRKY19 | Detail |
| C2H5g07321 | 5:23,892,025-23,894,896 | - | C1H5g04002 | CX5g039084 | LOC_Os05g49640 | - | - | Detail |
| C2H5g09536 | 5:23,895,915-23,897,740 | - | C1H5g05630 | CX5g039473 | LOC_Os05g49650 | Os05g0571400 | - | Detail |
| C2H5g14116 | 5:23,898,619-23,902,218 | - | C1H5g23505 | CX5g037409 | LOC_Os05g49680 | Os05g0571700 | - | Detail |
| C2H5g01741 | 5:23,905,975-23,906,802 | - | C1H5g31650 | CX5g038122 | LOC_Os05g49700 | Os05g0572000 | OsRPH1 | Detail |
| C2H5g01004 | 5:23,915,973-23,918,002 | - | C1H5g09233 | CX5g040343 | LOC_Os05g49730 | Os05g0572700 | - | Detail |
| C2H5g20444 | 5:23,925,945-23,928,008 | - | C1H5g26987 | CX5g037759 | LOC_Os05g49740 | Os05g0572900 | - | Detail |
| C2H5g08690 | 5:23,929,370-23,932,564 | - | C1H5g12531 | CX5g039397 | LOC_Os05g49750 | Os05g0573000 | - | Detail |
| C2H5g17652 | 5:23,935,405-23,938,609 | + | C1H5g06006 | CX5g036976 | LOC_Os05g49760 | Os05g0573200 | - | Detail |
| C2H5g07346 | 5:23,938,828-23,945,135 | - | C1H5g18333 | CX5g036857 | LOC_Os05g49770 | Os05g0573300 | - | Detail |
| C2H5g13745 | 5:23,965,402-23,968,553 | + | C1H5g30361 | CX5g039933 | LOC_Os05g49780 | Os05g0573500 | HAP3C, OsHAP3C, OsNF-YB-4, NFYB4 | Detail |
| C2H5g25143 | 5:23,970,861-23,971,274 | - | C1H5g18248 | CX5g040236 | LOC_Os05g49790 | Os05g0573600 | - | Detail |
| C2H5g09568 | 5:23,973,438-23,976,872 | - | C1H5g00854 | CX5g037555 | LOC_Os05g49800 | Os05g0573700 | - | Detail |
| C2H5g06151 | 5:23,979,142-23,980,140 | + | C1H5g11098 | CX5g040047 | LOC_Os05g49810 | Os05g0573800 | - | Detail |
| C2H5g07066 | 5:23,981,387-23,983,427 | + | C1H5g11098 | CX5g040047 | LOC_Os05g49810 | Os05g0573800 | - | Detail |
| C2H5g06386 | 5:23,983,736-23,987,904 | - | C1H5g10056 | CX5g037660 | LOC_Os05g49820 | Os05g0573900 | - | Detail |
| C2H5g04324 | 5:23,991,609-23,992,927 | + | C1H5g18130 | CX5g038298 | LOC_Os05g49830 | Os05g0574000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |