| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g19235 | 3:27,516,404-27,521,289 | - | C2H3g09804 | CX3g028000 | LOC_Os03g51250 | Os03g0722600 | - | Detail |
| C1H3g11775 | 3:27,524,762-27,526,918 | + | - | - | LOC_Os03g51260 | Os03g0722700 | - | Detail |
| C1H3g19716 | 3:27,530,964-27,538,047 | - | C2H3g01791 | CX3g028913 | LOC_Os03g51270 | Os03g0722800 | - | Detail |
| C1H3g18634 | 3:27,547,775-27,551,002 | + | C2H3g19711 | CX3g030375 | LOC_Os03g51330 | Os03g0723000 | - | Detail |
| C1H3g19621 | 3:27,554,129-27,555,117 | + | C2H3g23515 | CX3g025582 | LOC_Os03g51340 | - | - | Detail |
| C1H3g18910 | 3:27,560,158-27,561,187 | + | C2H3g08290 | CX3g030020 | LOC_Os03g51350 | Os03g0723400 | - | Detail |
| C1H3g18603 | 3:27,567,486-27,571,158 | + | C2H3g16773 | CX3g027992 | LOC_Os03g51380 | Os03g0723600 | - | Detail |
| C1H3g21377 | 3:27,584,910-27,585,263 | - | - | CX3g030004 | LOC_Os03g51420 | Os03g0724000 | - | Detail |
| C1H3g29238 | 3:27,595,306-27,596,865 | + | C2H3g11512 | CX3g025224 | LOC_Os03g51430 | Os03g0724100 | OsSec14-11 | Detail |
| C1H3g20683 | 3:27,598,455-27,602,134 | - | C2H3g26453 | CX3g028077 | LOC_Os03g51440 | Os03g0724300 | - | Detail |
| C1H3g30120 | 3:27,621,431-27,621,820 | - | C2H3g05139 | CX3g025441 | LOC_Os03g51459 | Os03g0724500 | - | Detail |
| C1H3g05968 | 3:27,624,582-27,626,556 | - | C2H3g13019 | CX3g025693 | LOC_Os03g51470 | Os03g0724600 | - | Detail |
| C1H3g04363 | 3:27,627,467-27,629,060 | + | C2H3g05753 | CX3g027196 | LOC_Os03g51479 | Os03g0724700 | - | Detail |
| C1H3g15090 | 3:27,671,660-27,671,971 | + | C2H3g12890 | CX3g028977 | LOC_Os03g51510 | Os03g0725000 | - | Detail |
| C1H3g02037 | 3:27,673,436-27,683,235 | + | C2H3g20716 | CX3g030919 | LOC_Os03g51520 | Os03g0725100 | - | Detail |
| C1H3g18345 | 3:27,684,895-27,690,679 | + | C2H3g06290 | CX3g029201 | LOC_Os03g51530 | Os03g0725200 | - | Detail |
| C1H3g09008 | 3:27,691,503-27,695,265 | + | C2H3g04142 | CX3g028312 | LOC_Os03g51550 | Os03g0725400 | - | Detail |
| C1H3g28685 | 3:27,722,430-27,724,857 | + | C2H3g06970 | CX3g029203 | LOC_Os03g51580 | Os03g0725800 | - | Detail |
| C1H3g18025 | 3:27,738,675-27,741,670 | + | C2H3g21598 | CX3g026793 | LOC_Os03g51600 | Os03g0726100 | - | Detail |
| C1H3g31013 | 3:27,748,093-27,753,800 | + | C2H3g10415 | CX3g027533 | LOC_Os03g51610 | Os03g0726200 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H7g26272 | 7:7,475,615-7,478,853 | - | C1H7g31709 | CX7g050403 | LOC_Os07g15500 | Os07g0258800 | - | Detail |
| C2H7g28749 | 7:7,487,275-7,487,520 | - | - | CX7g048521 | LOC_Os07g15530 | Os07g0259000 | - | Detail |
| C2H7g28516 | 7:7,489,124-7,491,912 | - | C1H7g26482 | CX7g046331 | LOC_Os07g15540 | Os07g0259100 | ETR4, PK3, OsPK3, OsETR4, OS-ETR4 | Detail |
| C2H7g00188 | 7:7,505,751-7,507,313 | + | C1H7g28801 | CX7g049499 | LOC_Os07g15570 | Os07g0259400 | - | Detail |
| C2H7g27669 | 7:7,507,495-7,508,229 | + | - | - | - | - | - | Detail |
| C2H7g09350 | 7:7,525,251-7,528,425 | - | C1H7g21375 | CX7g047547 | LOC_Os07g15600 | Os07g0259700 | - | Detail |
| C2H7g29337 | 7:7,548,650-7,554,566 | - | C1H7g07687 | CX7g046897 | LOC_Os07g15640 | Os07g0260000 | - | Detail |
| C2H7g26193 | 7:7,572,932-7,576,274 | + | C1H7g00035 | CX7g049255 | LOC_Os07g15670 | Os07g0260300 | - | Detail |
| C2H7g03068 | 7:7,581,482-7,587,714 | - | C1H7g12465 | CX7g046697 | LOC_Os07g15680 | Os07g0260400 | - | Detail |
| C2H7g28482 | 7:7,633,268-7,636,200 | - | C1H7g30006 | CX7g047387 | LOC_Os07g15770 | Os07g0261200 | GHD7, Ghd2, Ghd7, OsCCT26, OsCMF8, OsI | Detail |
| C2H7g01122 | 7:7,694,922-7,700,271 | - | C1H7g31512 | CX7g049319 | LOC_Os07g15880 | Os07g0262200 | NAL8 | Detail |
| C2H7g21162 | 7:7,710,741-7,713,705 | - | - | CX7g046436 | - | Os07g0262300 | - | Detail |
| C2H7g21491 | 7:7,728,068-7,730,086 | + | C1H7g21406 | CX7g048568 | LOC_Os07g15930 | Os07g0262600 | - | Detail |
| C2H7g17715 | 7:7,733,690-7,735,720 | - | C1H7g21406 | CX7g047260 | LOC_Os07g15940 | Os07g0262800 | - | Detail |
| C2H7g16025 | 7:7,765,472-7,768,048 | + | C1H7g22408 | - | - | - | - | Detail |
| C2H7g01386 | 7:7,772,953-7,776,234 | + | C1H7g22408 | CX7g046305 | LOC_Os07g15970 | Os07g0263400 | - | Detail |
| C2H7g09462 | 7:7,788,576-7,789,434 | + | C1H7g06413 | CX7g047611 | - | Os07g0264100 | - | Detail |
| C2H7g07882 | 7:7,814,749-7,819,737 | + | C1H7g09816 | CX7g046305 | LOC_Os07g16040 | Os07g0264100 | - | Detail |
| C2H7g12752 | 7:7,834,849-7,835,572 | + | C1H7g20158 | CX7g048213 | - | - | - | Detail |
| C2H7g28144 | 7:7,852,635-7,858,012 | + | C1H7g08514 | CX7g046311 | LOC_Os07g16130 | Os07g0264800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |