| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g31580 | 3:27,073,975-27,078,054 | - | C2H3g10695 | CX3g031057 | LOC_Os03g50560 | Os03g0713600 | PIBP1 | Detail |
| C1H3g19275 | 3:27,080,359-27,084,951 | + | C2H3g26349 | CX3g027124 | LOC_Os03g50570 | - | - | Detail |
| C1H3g08842 | 3:27,090,380-27,090,823 | + | C2H3g24928 | CX3g026388 | LOC_Os03g50590 | Os03g0714100 | - | Detail |
| C1H3g03025 | 3:27,096,874-27,101,383 | + | C2H3g05643 | CX3g025972 | LOC_Os03g50620 | Os03g0714400 | - | Detail |
| C1H3g05777 | 3:27,135,899-27,141,801 | + | C2H3g14544 | CX3g026364 | LOC_Os03g50730 | Os03g0715332 | - | Detail |
| C1H3g16416 | 3:27,141,969-27,151,372 | - | C2H3g21803 | CX3g026105 | LOC_Os03g50740 | Os03g0715500 | - | Detail |
| C1H3g22910 | 3:27,155,738-27,158,165 | + | C2H3g28319 | CX3g029092 | LOC_Os03g50760 | Os03g0715600 | - | Detail |
| C1H3g15466 | 3:27,170,402-27,173,393 | - | C2H3g20610 | CX3g028425 | LOC_Os03g50780 | Os03g0716200 | TIP3 | Detail |
| C1H3g13419 | 3:27,193,961-27,197,839 | - | C2H3g20165 | CX3g026031 | LOC_Os03g50810 | Os03g0717000 | OsTMK | Detail |
| C1H3g11111 | 3:27,204,441-27,206,760 | + | C2H3g17240 | CX3g030295 | LOC_Os03g50820 | Os03g0717200 | - | Detail |
| C1H3g17908 | 3:27,211,184-27,217,900 | - | C2H3g18569 | CX3g027168 | LOC_Os03g50850 | Os03g0717600 | - | Detail |
| C1H3g17527 | 3:27,226,256-27,232,312 | + | C2H3g26503 | CX3g030571 | LOC_Os03g50860 | Os03g0717700 | - | Detail |
| C1H3g18557 | 3:27,237,709-27,240,582 | + | C2H3g23833 | CX3g025771 | LOC_Os03g50870 | Os03g0717900 | - | Detail |
| C1H3g24319 | 3:27,241,007-27,244,411 | - | C2H3g04275 | CX3g031328 | LOC_Os03g50880 | Os03g0718000 | OASB2 | Detail |
| C1H3g01613 | 3:27,247,709-27,250,058 | + | C2H3g25200 | CX3g028008 | LOC_Os03g50885 | Os03g0718100 | - | Detail |
| C1H3g10193 | 3:27,251,331-27,256,594 | - | C2H3g25903 | - | - | - | - | Detail |
| C1H3g23147 | 3:27,276,626-27,279,326 | - | C2H3g13023 | CX3g028458 | LOC_Os03g50940 | Os03g0718600 | OsCOX11 | Detail |
| C1H3g22111 | 3:27,292,283-27,296,698 | - | C2H3g23829 | CX3g030965 | LOC_Os03g50970 | Os03g0719000 | - | Detail |
| C1H3g19794 | 3:27,304,558-27,312,123 | + | C2H3g02193 | CX3g028424 | LOC_Os03g50980 | Os03g0719100 | SIZ2, OsSIZ2 | Detail |
| C1H3g27091 | 3:27,314,156-27,321,766 | - | C2H3g22670 | CX3g025374 | LOC_Os03g51000 | Os03g0719300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g15259 | 9:13,434,841-13,435,822 | - | C1H9g15524 | CX9g055347 | LOC_Os09g26470 | Os09g0435250 | - | Detail |
| C2H9g03422 | 9:13,437,865-13,441,018 | - | C1H9g15524 | CX9g055347 | LOC_Os09g26470 | Os09g0435250 | - | Detail |
| C2H9g09724 | 9:13,446,277-13,447,467 | + | C1H9g05369 | CX9g057698 | LOC_Os09g26480 | - | - | Detail |
| C2H9g14632 | 9:13,456,830-13,458,152 | + | C1H9g19041 | CX9g054961 | LOC_Os09g26500 | Os09g0435700 | - | Detail |
| C2H9g30633 | 9:13,459,794-13,462,499 | - | C1H9g08312 | CX9g057172 | LOC_Os09g26560 | Os09g0436700 | - | Detail |
| C2H9g21233 | 9:13,465,283-13,476,610 | + | C1H9g26425 | CX9g056280 | LOC_Os09g26570 | Os09g0436800 | - | Detail |
| C2H9g00492 | 9:13,477,413-13,480,745 | + | C1H9g23177 | CX9g057291 | LOC_Os09g26580 | Os09g0436900 | - | Detail |
| C2H9g23573 | 9:13,522,063-13,523,941 | + | C1H9g21686 | CX9g057952 | LOC_Os09g26620 | Os09g0437500 | - | Detail |
| C2H9g14978 | 9:13,536,716-13,541,741 | + | C1H9g24554 | CX9g055490 | LOC_Os09g26650 | Os09g0437900 | - | Detail |
| C2H9g27047 | 9:13,553,018-13,564,034 | + | C1H9g08513 | CX9g054927 | LOC_Os09g26660 | Os09g0438000 | - | Detail |
| C2H9g20994 | 9:13,576,305-13,580,039 | + | C1H9g20112 | CX9g057379 | LOC_Os09g26700 | Os09g0438400 | - | Detail |
| C2H9g14306 | 9:13,584,816-13,588,809 | - | C1H9g28577 | CX9g055603 | LOC_Os09g26730 | Os09g0438700 | - | Detail |
| C2H9g11312 | 9:13,589,802-13,595,397 | - | C1H9g16805 | CX9g056328 | LOC_Os09g26760 | Os09g0439000 | - | Detail |
| C2H9g23826 | 9:13,601,591-13,602,833 | - | C1H9g29651 | CX9g056370 | LOC_Os09g26780 | Os09g0439200 | TIFY10C, OsJAZ7, OsJAZ 8, OsJAZ8, Os-JAZ8, JAZ8, OsTIFY10c, OsTIFY10c/OsJAZ8 | Detail |
| C2H9g11140 | 9:13,611,056-13,615,575 | + | C1H9g23984 | CX9g055995 | LOC_Os09g26800 | Os09g0439400 | - | Detail |
| C2H9g08335 | 9:13,616,371-13,619,064 | + | C1H9g04697 | CX9g055543 | LOC_Os09g26810 | Os09g0439500 | - | Detail |
| C2H9g01871 | 9:13,629,522-13,633,996 | - | C1H9g08389 | CX9g057070 | LOC_Os09g26830 | Os09g0439700 | - | Detail |
| C2H9g05545 | 9:13,636,587-13,639,099 | - | C1H9g03005 | CX9g056810 | LOC_Os09g26840 | Os09g0439800 | DRO1, Dro1 | Detail |
| C2H9g26904 | 9:13,651,920-13,656,034 | + | C1H9g31362 | CX9g057829 | LOC_Os09g26870 | Os09g0440200 | - | Detail |
| C2H9g23477 | 9:13,656,062-13,663,114 | - | C1H9g12516 | CX9g057254 | LOC_Os09g26880 | Os09g0440300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |