| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g01922 | 3:26,743,428-26,745,653 | - | C2H3g11307 | CX3g030763 | LOC_Os03g50090 | Os03g0708600 | - | Detail |
| C1H3g14178 | 3:26,746,986-26,752,073 | - | C2H3g20554 | CX3g025191 | LOC_Os03g50100 | Os03g0708700 | - | Detail |
| C1H3g04028 | 3:26,761,227-26,762,360 | - | C2H3g02008 | CX3g026061 | LOC_Os03g50110 | Os03g0708800 | - | Detail |
| C1H3g25650 | 3:26,764,606-26,768,838 | + | C2H3g01107 | CX3g026724 | LOC_Os03g50120 | Os03g0708900 | - | Detail |
| C1H3g26419 | 3:26,770,835-26,772,770 | - | C2H3g12581 | CX3g026549 | - | Os03g0709000 | - | Detail |
| C1H3g00554 | 3:26,774,735-26,774,941 | - | C2H3g23367 | CX3g030849 | LOC_Os03g50140 | Os03g0709100 | OsUCL8 | Detail |
| C1H3g08833 | 3:26,775,033-26,775,239 | - | C2H3g12217 | CX3g030849 | LOC_Os03g50140 | Os03g0709100 | OsUCL8 | Detail |
| C1H3g00862 | 3:26,780,962-26,782,749 | - | C2H3g17990 | CX3g027687 | LOC_Os03g50160 | Os03g0709300 | - | Detail |
| C1H3g26800 | 3:26,804,791-26,806,092 | + | C2H3g22762 | CX3g031286 | LOC_Os03g50210 | Os03g0710000 | - | Detail |
| C1H3g31046 | 3:26,806,597-26,809,136 | - | C2H3g19621 | CX3g026541 | LOC_Os03g50220 | - | - | Detail |
| C1H3g04126 | 3:26,810,173-26,810,750 | - | C2H3g18554 | CX3g026477 | LOC_Os12g44330 | Os03g0789000 | OsCPK11 | Detail |
| C1H3g07148 | 3:26,814,366-26,815,461 | - | C2H3g09223 | CX3g026477 | LOC_Os03g50230 | Os03g0710100 | OsHOP2 | Detail |
| C1H3g05875 | 3:26,817,837-26,820,565 | + | C2H3g20376 | CX3g028078 | LOC_Os03g50250 | Os03g0710500 | - | Detail |
| C1H3g17966 | 3:26,824,271-26,825,550 | - | C2H3g06541 | CX3g029323 | LOC_Os03g50270 | Os03g0710600 | - | Detail |
| C1H3g12018 | 3:26,828,078-26,830,494 | - | C2H3g00310 | CX3g027946 | LOC_Os03g50280 | Os03g0710700 | - | Detail |
| C1H3g30860 | 3:26,837,279-26,841,045 | + | C2H3g13816 | CX3g029821 | LOC_Os03g50290 | Os03g0710800 | GF14f, SR14-3-3 | Detail |
| C1H3g01378 | 3:26,844,719-26,852,846 | + | C2H3g13830 | CX3g029660 | LOC_Os03g50300 | Os03g0710900 | - | Detail |
| C1H3g31233 | 3:26,858,798-26,861,216 | + | C2H3g07676 | CX3g028553 | LOC_Os03g50310 | Os03g0711100 | OsCOL10, OsBBX10, OsJ, OsCCT14 | Detail |
| C1H3g26509 | 3:26,861,572-26,876,891 | - | C2H3g02097 | CX3g031158 | LOC_Os03g50320 | Os03g0711200 | - | Detail |
| C1H3g08523 | 3:26,878,922-26,886,708 | - | C2H3g27257 | CX3g026863 | LOC_Os03g50330 | Os03g0711300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g25270 | 1:13,123,082-13,129,736 | - | C1H1g30276 | CX1g005070 | LOC_Os01g25600 | Os01g0358300 | - | Detail |
| C2H1g10144 | 1:13,130,024-13,131,898 | + | C1H1g20203 | CX1g001263 | LOC_Os01g25610 | Os01g0358400 | - | Detail |
| C2H1g03894 | 1:13,149,888-13,151,199 | + | C1H1g14226 | - | - | Os01g0358800 | - | Detail |
| C2H1g07720 | 1:13,151,579-13,151,963 | - | C1H1g01348 | - | LOC_Os01g25660 | Os01g0358900 | - | Detail |
| C2H1g08239 | 1:13,160,043-13,161,770 | - | C1H1g10195 | CX1g003464 | LOC_Os01g25720 | Os01g0359400 | - | Detail |
| C2H1g25540 | 1:13,161,787-13,162,200 | - | C1H1g10195 | CX1g003464 | LOC_Os01g25720 | Os01g0359400 | - | Detail |
| C2H1g29756 | 1:13,187,051-13,192,021 | - | - | - | - | - | - | Detail |
| C2H1g09088 | 1:13,216,090-13,219,684 | - | C1H1g00543 | CX1g006302 | LOC_Os01g25810 | Os01g0360100 | - | Detail |
| C2H1g10155 | 1:13,219,759-13,220,628 | - | C1H1g00543 | CX1g004543 | LOC_Os01g25810 | Os01g0359800 | - | Detail |
| C2H1g17762 | 1:13,233,973-13,240,826 | - | C1H1g22392 | CX1g005188 | LOC_Os01g25820 | Os01g0360200 | - | Detail |
| C2H1g27512 | 1:13,285,869-13,289,989 | - | C1H1g17695 | CX1g006931 | LOC_Os01g25880 | Os01g0360600 | - | Detail |
| C2H1g24244 | 1:13,351,122-13,357,067 | - | C1H1g06501 | CX1g003047 | LOC_Os01g25990 | Os01g0361500 | - | Detail |
| C2H1g18033 | 1:13,365,224-13,369,580 | - | C1H1g04686 | CX1g004889 | LOC_Os01g26000 | Os01g0361700 | - | Detail |
| C2H1g29968 | 1:13,374,847-13,376,390 | + | C1H1g26641 | CX1g002210 | LOC_Os01g26020 | Os01g0362000 | - | Detail |
| C2H1g07083 | 1:13,376,907-13,384,840 | - | C1H1g15274 | CX1g003047 | LOC_Os01g26039 | Os01g0362100 | - | Detail |
| C2H1g02160 | 1:13,428,128-13,428,448 | + | C1H1g28041 | CX1g005390 | LOC_Os01g26120 | Os01g0363300 | - | Detail |
| C2H1g04737 | 1:13,431,768-13,432,076 | + | C1H1g30035 | CX1g005390 | LOC_Os01g26120 | Os01g0363300 | - | Detail |
| C2H1g13010 | 1:13,432,989-13,434,374 | - | C1H1g28258 | CX1g005904 | - | Os01g0363600 | - | Detail |
| C2H1g13428 | 1:13,436,833-13,439,395 | - | C1H1g05215 | CX1g003071 | LOC_Os10g14290 | Os01g0807000 | - | Detail |
| C2H1g07902 | 1:13,450,374-13,463,388 | + | C1H1g26907 | CX1g000125 | LOC_Os01g26160 | Os01g0363900 | CRD1 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |