| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g20716 | 3:26,449,419-26,455,721 | - | C2H3g29194 | CX3g026534 | LOC_Os03g49630 | Os03g0703300 | - | Detail |
| C1H3g05428 | 3:26,458,112-26,464,358 | - | C2H3g01101 | CX3g027729 | LOC_Os03g49640 | Os03g0703400 | OsCSL1, MKKK22 | Detail |
| C1H3g02932 | 3:26,471,210-26,471,830 | + | C2H3g22172 | CX3g031175 | - | Os03g0703600 | - | Detail |
| C1H3g27763 | 3:26,479,354-26,481,983 | + | C2H3g29973 | CX3g028108 | LOC_Os03g49700 | Os03g0703900 | - | Detail |
| C1H3g27362 | 3:26,483,366-26,484,792 | + | C2H3g13190 | CX3g026571 | LOC_Os03g49710 | Os03g0704000 | - | Detail |
| C1H3g23851 | 3:26,486,613-26,489,527 | + | C2H3g08604 | CX3g029652 | LOC_Os03g49720 | Os03g0704100 | - | Detail |
| C1H3g07852 | 3:26,490,214-26,493,452 | - | C2H3g29014 | CX3g027461 | LOC_Os03g49730 | Os03g0704200 | - | Detail |
| C1H3g06974 | 3:26,493,521-26,493,748 | - | C2H3g23956 | - | LOC_Os03g49730 | Os03g0704200 | - | Detail |
| C1H3g28557 | 3:26,494,249-26,499,170 | + | C2H3g16102 | CX3g029894 | LOC_Os03g49750 | Os03g0704400 | - | Detail |
| C1H3g03526 | 3:26,509,027-26,518,121 | + | C2H3g11078 | CX3g026920 | LOC_Os03g49770 | Os03g0704700 | ORP1C | Detail |
| C1H3g14731 | 3:26,531,849-26,536,412 | - | C2H3g28946 | CX3g030070 | LOC_Os03g49800 | Os03g0705300 | - | Detail |
| C1H3g17034 | 3:26,584,653-26,586,775 | + | C2H3g19805 | CX3g026164 | LOC_Os03g49830 | Os03g0705800 | - | Detail |
| C1H3g02900 | 3:26,641,456-26,648,704 | - | C2H3g09610 | CX3g028672 | LOC_Os03g49900 | Os03g0706900 | LE, TT3.1, DGS1 | Detail |
| C1H3g20914 | 3:26,657,222-26,659,547 | + | C2H3g07887 | CX3g028303 | LOC_Os03g49940 | Os03g0707200 | TT3.2 | Detail |
| C1H3g18351 | 3:26,661,178-26,669,551 | - | C2H3g17433 | CX3g029801 | LOC_Os03g49960 | Os03g0707300 | - | Detail |
| C1H3g18483 | 3:26,708,749-26,717,022 | - | C2H3g19955 | CX3g027756 | LOC_Os03g50010 | Os03g0707900 | - | Detail |
| C1H3g03460 | 3:26,721,806-26,723,504 | + | C2H3g30153 | CX3g025431 | LOC_Os03g50030 | Os03g0708000 | - | Detail |
| C1H3g17884 | 3:26,725,970-26,728,869 | - | C2H3g07785 | CX3g025623 | LOC_Os03g50040 | Os03g0708100 | - | Detail |
| C1H3g20236 | 3:26,735,509-26,739,257 | + | C2H3g01941 | CX3g030384 | LOC_Os03g50070 | Os03g0708400 | - | Detail |
| C1H3g01824 | 3:26,739,932-26,740,886 | - | C2H3g11988 | - | LOC_Os03g50080 | Os03g0708500 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g20996 | 4:30,225,879-30,227,521 | - | C1H4g05282 | CX4g034879 | LOC_Os04g58710 | Os04g0683700 | OsAAE3 | Detail |
| C2H4g00697 | 4:30,232,390-30,237,758 | + | C1H4g17079 | CX4g033496 | LOC_Os04g58720 | Os04g0683800 | OsFTIP6 | Detail |
| C2H4g01840 | 4:30,237,886-30,240,588 | - | C1H4g07968 | CX4g032610 | LOC_Os04g58730 | Os04g0683900 | - | Detail |
| C2H4g26858 | 4:30,256,940-30,263,782 | + | C1H4g20128 | CX4g033459 | LOC_Os04g58750 | Os04g0684200 | OsBSK3 | Detail |
| C2H4g01802 | 4:30,264,613-30,265,466 | + | C1H4g02282 | CX4g033405 | LOC_Os04g58760 | Os04g0684300 | OsCASP1 | Detail |
| C2H4g02516 | 4:30,268,563-30,279,634 | + | C1H4g18219 | CX4g031834 | LOC_Os04g58780 | Os04g0684500 | - | Detail |
| C2H4g13202 | 4:30,280,251-30,280,496 | + | - | CX4g033329 | LOC_Os04g58790 | Os04g0684600 | - | Detail |
| C2H4g22761 | 4:30,283,690-30,285,252 | + | C1H4g26669 | CX4g033643 | LOC_Os04g58800 | Os04g0684800 | - | Detail |
| C2H4g01080 | 4:30,288,522-30,289,517 | + | - | CX4g034684 | LOC_Os04g58810 | Os04g0684900 | OsCAF1B, OsCAF1B(L), OsCAF1-5 | Detail |
| C2H4g29352 | 4:30,296,915-30,297,646 | + | - | CX4g032372 | LOC_Os04g58820 | Os04g0685000 | - | Detail |
| C2H4g17883 | 4:30,300,119-30,302,518 | - | C1H4g14195 | CX4g035667 | LOC_Os04g58830 | Os04g0685100 | - | Detail |
| C2H4g29963 | 4:30,304,800-30,306,281 | + | - | CX4g035231 | LOC_Os04g58840 | Os04g0685200 | - | Detail |
| C2H4g08586 | 4:30,310,521-30,311,138 | - | C1H4g00056 | CX4g035928 | LOC_Os04g58850 | Os04g0685300 | OsHin1 | Detail |
| C2H4g17212 | 4:30,315,783-30,316,445 | - | - | CX4g035805 | LOC_Os04g58860 | Os04g0685400 | - | Detail |
| C2H4g10173 | 4:30,321,505-30,324,811 | - | C1H4g22677 | CX4g034074 | LOC_Os04g58870 | Os04g0685500 | - | Detail |
| C2H4g09863 | 4:30,328,518-30,334,739 | - | C1H4g12841 | CX4g034074 | LOC_Os04g58880 | Os04g0685600 | OsEXO70A1, RLS2 | Detail |
| C2H4g05485 | 4:30,338,214-30,339,059 | - | - | CX4g035539 | LOC_Os04g58890 | Os04g0685700 | - | Detail |
| C2H4g05284 | 4:30,341,417-30,344,361 | + | C1H4g24643 | CX4g035298 | LOC_Os04g58900 | Os04g0685800 | - | Detail |
| C2H4g20145 | 4:30,346,745-30,350,657 | - | C1H4g30748 | CX4g033134 | LOC_Os04g58910 | Os04g0685900 | - | Detail |
| C2H4g20450 | 4:30,359,547-30,360,785 | - | - | - | LOC_Os04g58920 | Os04g0686000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |