| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g20716 | 3:26,449,419-26,455,721 | - | C2H3g29194 | CX3g026534 | LOC_Os03g49630 | Os03g0703300 | - | Detail |
| C1H3g05428 | 3:26,458,112-26,464,358 | - | C2H3g01101 | CX3g027729 | LOC_Os03g49640 | Os03g0703400 | OsCSL1, MKKK22 | Detail |
| C1H3g02932 | 3:26,471,210-26,471,830 | + | C2H3g22172 | CX3g031175 | - | Os03g0703600 | - | Detail |
| C1H3g27763 | 3:26,479,354-26,481,983 | + | C2H3g29973 | CX3g028108 | LOC_Os03g49700 | Os03g0703900 | - | Detail |
| C1H3g27362 | 3:26,483,366-26,484,792 | + | C2H3g13190 | CX3g026571 | LOC_Os03g49710 | Os03g0704000 | - | Detail |
| C1H3g23851 | 3:26,486,613-26,489,527 | + | C2H3g08604 | CX3g029652 | LOC_Os03g49720 | Os03g0704100 | - | Detail |
| C1H3g07852 | 3:26,490,214-26,493,452 | - | C2H3g29014 | CX3g027461 | LOC_Os03g49730 | Os03g0704200 | - | Detail |
| C1H3g06974 | 3:26,493,521-26,493,748 | - | C2H3g23956 | - | LOC_Os03g49730 | Os03g0704200 | - | Detail |
| C1H3g28557 | 3:26,494,249-26,499,170 | + | C2H3g16102 | CX3g029894 | LOC_Os03g49750 | Os03g0704400 | - | Detail |
| C1H3g03526 | 3:26,509,027-26,518,121 | + | C2H3g11078 | CX3g026920 | LOC_Os03g49770 | Os03g0704700 | ORP1C | Detail |
| C1H3g14731 | 3:26,531,849-26,536,412 | - | C2H3g28946 | CX3g030070 | LOC_Os03g49800 | Os03g0705300 | - | Detail |
| C1H3g17034 | 3:26,584,653-26,586,775 | + | C2H3g19805 | CX3g026164 | LOC_Os03g49830 | Os03g0705800 | - | Detail |
| C1H3g02900 | 3:26,641,456-26,648,704 | - | C2H3g09610 | CX3g028672 | LOC_Os03g49900 | Os03g0706900 | LE, TT3.1, DGS1 | Detail |
| C1H3g20914 | 3:26,657,222-26,659,547 | + | C2H3g07887 | CX3g028303 | LOC_Os03g49940 | Os03g0707200 | TT3.2 | Detail |
| C1H3g18351 | 3:26,661,178-26,669,551 | - | C2H3g17433 | CX3g029801 | LOC_Os03g49960 | Os03g0707300 | - | Detail |
| C1H3g18483 | 3:26,708,749-26,717,022 | - | C2H3g19955 | CX3g027756 | LOC_Os03g50010 | Os03g0707900 | - | Detail |
| C1H3g03460 | 3:26,721,806-26,723,504 | + | C2H3g30153 | CX3g025431 | LOC_Os03g50030 | Os03g0708000 | - | Detail |
| C1H3g17884 | 3:26,725,970-26,728,869 | - | C2H3g07785 | CX3g025623 | LOC_Os03g50040 | Os03g0708100 | - | Detail |
| C1H3g20236 | 3:26,735,509-26,739,257 | + | C2H3g01941 | CX3g030384 | LOC_Os03g50070 | Os03g0708400 | - | Detail |
| C1H3g01824 | 3:26,739,932-26,740,886 | - | C2H3g11988 | - | LOC_Os03g50080 | Os03g0708500 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g20992 | 6:20,786,978-20,788,881 | + | C1H6g05226 | CX6g044623 | LOC_Os06g39906 | Os06g0601000 | - | Detail |
| C2H6g28120 | 6:20,804,013-20,806,774 | + | C1H6g03363 | CX6g042659 | LOC_Os06g39960 | Os06g0601500 | OsbZIP48, OsHY5L2 | Detail |
| C2H6g17237 | 6:20,807,903-20,811,157 | + | C1H6g30468 | CX6g042583 | LOC_Os06g39970 | Os06g0601600 | OsCESA11 | Detail |
| C2H6g29039 | 6:20,821,571-20,826,537 | + | C1H6g18591 | CX6g044674 | LOC_Os06g40020 | Os06g0602400 | OsRH52A | Detail |
| C2H6g11572 | 6:20,841,490-20,843,038 | + | C1H6g01432 | CX6g045252 | LOC_Os06g40040 | Os06g0602600 | - | Detail |
| C2H6g05068 | 6:20,843,594-20,847,246 | - | C1H6g22569 | CX6g041818 | LOC_Os06g40050 | Os06g0602700 | BT1-3, OsBT1-3 | Detail |
| C2H6g14435 | 6:20,862,399-20,866,430 | + | C1H6g14736 | CX6g042177 | LOC_Os06g40060 | Os06g0602800 | - | Detail |
| C2H6g04094 | 6:20,867,690-20,870,961 | - | C1H6g19546 | CX6g041181 | LOC_Os06g40070 | Os06g0602900 | - | Detail |
| C2H6g04563 | 6:20,873,487-20,876,999 | - | C1H6g00043 | CX6g043114 | LOC_Os06g40080 | Os06g0603000 | SE5, Se5, OsHO1, OsHO-1, OsHY1, HO-1, HO1, OsSE5, PE-1, grc1 | Detail |
| C2H6g18680 | 6:20,895,801-20,899,841 | - | C1H6g11187 | CX6g043946 | LOC_Os06g40120 | Os06g0603600 | OsSPX1 | Detail |
| C2H6g21981 | 6:20,916,404-20,917,475 | - | C1H6g05477 | CX6g044688 | LOC_Os06g40150 | Os06g0604000 | OsWR2 | Detail |
| C2H6g11228 | 6:20,925,550-20,928,685 | - | C1H6g20423 | CX6g045934 | LOC_Os06g40170 | Os06g0604200 | OsPLDα4, OsPLDa4, OsPLDalpha4, PLDalpha4 | Detail |
| C2H6g10259 | 6:20,936,778-20,938,125 | + | - | - | - | - | - | Detail |
| C2H6g26456 | 6:20,939,165-20,942,144 | + | C1H6g10180 | CX6g045594 | LOC_Os06g40180 | Os06g0604300 | OsPLDα5, OsPLDa5, OsPLDalpha5, PLDalpha5 | Detail |
| C2H6g06437 | 6:20,946,189-20,949,815 | + | C1H6g27795 | CX6g041305 | LOC_Os06g40190 | Os06g0604400 | OsPLDα3 | Detail |
| C2H6g13702 | 6:20,952,820-20,956,957 | + | C1H6g25357 | CX6g042132 | LOC_Os06g40200 | Os06g0604500 | - | Detail |
| C2H6g02651 | 6:20,967,982-20,968,696 | + | C1H6g04884 | CX6g044895 | LOC_Os06g40210 | Os06g0604600 | - | Detail |
| C2H6g13160 | 6:20,976,308-20,977,652 | - | C1H6g20614 | CX6g045437 | LOC_Os06g40220 | - | - | Detail |
| C2H6g05081 | 6:20,988,280-20,988,522 | + | C1H6g13328 | CX6g045873 | LOC_Os06g40320 | - | - | Detail |
| C2H6g19267 | 6:21,013,433-21,015,541 | - | C1H6g27028 | CX6g045451 | LOC_Os06g40330 | Os06g0605600 | OsGAMYBL1 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |