| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g05707 | 3:26,222,167-26,226,157 | + | C2H3g17436 | CX3g027914 | LOC_Os03g49260 | Os03g0699700 | Osr9-LOX1 | Detail |
| C1H3g00070 | 3:26,276,000-26,281,263 | + | C2H3g05028 | CX3g026782 | LOC_Os03g49350 | Os03g0700400 | LOX-3 | Detail |
| C1H3g28644 | 3:26,295,127-26,301,411 | + | C2H3g00658 | CX3g026204 | LOC_Os03g49380 | Os03g0700700 | - | Detail |
| C1H3g00971 | 3:26,304,817-26,312,495 | + | C2H3g05258 | CX3g025372 | LOC_Os03g49400 | Os03g0700800 | - | Detail |
| C1H3g06905 | 3:26,317,358-26,325,881 | + | C2H3g25047 | CX3g029939 | LOC_Os03g49420 | Os03g0701000 | - | Detail |
| C1H3g16586 | 3:26,327,773-26,330,403 | - | C2H3g16404 | CX3g025036 | LOC_Os03g49430 | Os03g0701100 | - | Detail |
| C1H3g02438 | 3:26,331,306-26,334,484 | + | C2H3g29777 | CX3g031052 | LOC_Os03g49440 | Os03g0701200 | - | Detail |
| C1H3g07329 | 3:26,336,667-26,342,114 | + | C2H3g02417 | CX3g025970 | LOC_Os03g49464 | Os03g0701300 | - | Detail |
| C1H3g30968 | 3:26,344,592-26,345,705 | + | C2H3g02951 | CX3g026197 | - | - | - | Detail |
| C1H3g23591 | 3:26,350,081-26,353,417 | - | C2H3g12750 | CX3g027768 | LOC_Os03g49485 | Os03g0701600 | - | Detail |
| C1H3g03877 | 3:26,362,085-26,366,534 | - | C2H3g06305 | CX3g028834 | LOC_Os03g49500 | Os03g0701700 | - | Detail |
| C1H3g05492 | 3:26,372,353-26,378,831 | + | C2H3g14249 | CX3g030270 | LOC_Os03g49510 | Os03g0701800 | - | Detail |
| C1H3g29237 | 3:26,378,982-26,383,022 | - | C2H3g17325 | CX3g025317 | LOC_Os03g49520 | Os03g0701900 | - | Detail |
| C1H3g26019 | 3:26,392,572-26,394,046 | - | C2H3g13892 | CX3g029512 | LOC_Os03g49524 | Os03g0702000 | - | Detail |
| C1H3g02000 | 3:26,398,510-26,399,928 | + | C2H3g03163 | CX3g030273 | LOC_Os03g49550 | Os03g0702500 | - | Detail |
| C1H3g01842 | 3:26,419,738-26,424,496 | + | C2H3g18085 | CX3g029283 | LOC_Os03g49570 | Os03g0702700 | - | Detail |
| C1H3g13716 | 3:26,429,987-26,430,640 | - | C2H3g29993 | CX3g025714 | LOC_Os03g49590 | Os03g0702900 | - | Detail |
| C1H3g15421 | 3:26,430,939-26,435,492 | - | C2H3g11714 | CX3g027255 | LOC_Os03g49600 | Os03g0703000 | - | Detail |
| C1H3g29071 | 3:26,437,575-26,442,851 | - | C2H3g22582 | CX3g027190 | LOC_Os03g49610 | Os03g0703100 | - | Detail |
| C1H3g29286 | 3:26,443,242-26,448,622 | - | C2H3g04815 | CX3g028984 | LOC_Os03g49620 | Os03g0703200 | TMS10L | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H11g11772 | 11:15,253,789-15,254,126 | + | C1H11g02127 | CX11g011942 | LOC_Os09g26250 | - | - | Detail |
| C2H11g17249 | 11:15,260,524-15,262,146 | + | C1H11g08115 | CX11g014982 | LOC_Os11g29630 | Os11g0487100 | - | Detail |
| C2H11g09967 | 11:15,273,767-15,278,763 | + | C1H11g21289 | CX11g012672 | LOC_Os11g29520 | Os11g0485900 | - | Detail |
| C2H11g02984 | 11:15,290,702-15,295,587 | - | C1H11g26253 | CX11g014664 | LOC_Os11g29490 | Os11g0485200 | - | Detail |
| C2H11g28581 | 11:15,311,457-15,312,667 | + | C1H11g03351 | CX11g013967 | LOC_Os11g29420 | Os11g0484700 | - | Detail |
| C2H11g07342 | 11:15,336,438-15,341,113 | + | C1H11g31766 | CX11g013586 | LOC_Os11g29750 | Os11g0485200 | - | Detail |
| C2H11g12701 | 11:15,379,407-15,382,595 | + | C1H11g15909 | CX11g012659 | LOC_Os11g29790 | Os11g0490200 | - | Detail |
| C2H11g04465 | 11:15,400,952-15,408,609 | + | C1H11g25328 | CX11g012238 | LOC_Os11g29840 | Os11g0490600 | - | Detail |
| C2H11g24558 | 11:15,416,382-15,418,862 | + | C1H11g17465 | CX11g013968 | LOC_Os11g29850 | Os11g0490800 | ABCI7, OsABCI7_2, OsABCI8, OsABCI8.2 | Detail |
| C2H11g11056 | 11:15,419,000-15,420,099 | + | C1H11g18701 | - | - | - | - | Detail |
| C2H11g22073 | 11:15,438,114-15,441,107 | + | C1H11g28874 | CX11g012017 | LOC_Os11g29870 | Os11g0490900 | OsWRKY72 | Detail |
| C2H11g19911 | 11:15,447,684-15,449,490 | + | C1H11g25141 | CX11g012949 | LOC_Os11g29900 | Os11g0491400 | - | Detail |
| C2H11g18896 | 11:15,451,085-15,451,736 | + | C1H11g08720 | CX11g012255 | LOC_Os11g29910 | Os11g0491500 | - | Detail |
| C2H11g18520 | 11:15,455,673-15,461,382 | - | C1H11g17379 | CX11g011930 | LOC_Os11g29920 | Os11g0492100 | - | Detail |
| C2H11g16151 | 11:15,472,453-15,472,805 | - | C1H11g08708 | CX11g011930 | LOC_Os11g29970 | Os11g0493700 | - | Detail |
| C2H11g16330 | 11:15,485,443-15,487,805 | - | C1H11g28346 | CX11g013410 | LOC_Os11g29980 | Os11g0492200 | - | Detail |
| C2H11g05627 | 11:15,495,586-15,498,251 | - | C1H11g03319 | CX11g013410 | LOC_Os11g29980 | Os11g0492200 | - | Detail |
| C2H11g04870 | 11:15,510,400-15,510,733 | + | C1H11g09394 | CX7g047819 | LOC_Os07g33220 | Os07g0516000 | - | Detail |
| C2H11g24209 | 11:15,513,094-15,518,844 | - | C1H11g21177 | CX11g012867 | LOC_Os11g29970 | Os11g0492100 | - | Detail |
| C2H11g00475 | 11:15,600,844-15,602,535 | - | C1H11g08407 | CX11g012642 | LOC_Os11g29970 | Os11g0492500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |