| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g19279 | 3:26,043,776-26,047,026 | + | C2H3g22251 | CX3g031355 | LOC_Os03g48810 | Os03g0694500 | - | Detail |
| C1H3g26684 | 3:26,058,471-26,066,396 | + | C2H3g26534 | CX3g030087 | LOC_Os03g48850 | Os03g0694900 | - | Detail |
| C1H3g09569 | 3:26,084,077-26,087,984 | + | C2H3g18441 | CX3g027739 | LOC_Os03g48920 | Os03g0695500 | - | Detail |
| C1H3g24942 | 3:26,088,070-26,090,383 | - | C2H3g02189 | CX3g031086 | LOC_Os03g48930 | Os03g0695600 | - | Detail |
| C1H3g15935 | 3:26,091,097-26,101,605 | - | C2H3g02669 | CX3g031322 | LOC_Os03g48940 | Os03g0695700 | - | Detail |
| C1H3g18763 | 3:26,105,108-26,106,031 | + | C2H3g25659 | CX3g027930 | LOC_Os03g48950 | Os03g0696000 | - | Detail |
| C1H3g06932 | 3:26,113,541-26,115,141 | + | C2H8g18549 | - | - | Os10g0410100 | - | Detail |
| C1H3g17032 | 3:26,120,772-26,124,777 | + | C2H3g00519 | CX3g026991 | LOC_Os03g48970 | Os03g0696300 | - | Detail |
| C1H3g13231 | 3:26,130,462-26,137,603 | + | C2H3g19190 | CX3g031047 | LOC_Os03g49010 | Os03g0565900 | - | Detail |
| C1H3g02064 | 3:26,146,775-26,149,114 | + | C2H3g17803 | CX3g029768 | LOC_Os03g49050 | Os03g0109300 | - | Detail |
| C1H3g16785 | 3:26,157,063-26,160,492 | + | C2H3g15504 | CX3g028722 | LOC_Os03g49126 | Os03g0697833 | - | Detail |
| C1H3g27645 | 3:26,163,591-26,168,775 | - | C2H3g27379 | CX3g029661 | LOC_Os03g49140 | Os03g0698350 | - | Detail |
| C1H3g28768 | 3:26,172,449-26,175,630 | + | C2H3g20960 | CX3g030702 | LOC_Os03g49150 | Os03g0698500 | - | Detail |
| C1H3g04379 | 3:26,183,997-26,187,527 | + | C2H3g00073 | CX3g025989 | LOC_Os03g49170 | Os03g0698800 | - | Detail |
| C1H3g08733 | 3:26,188,892-26,192,726 | - | C2H3g03385 | CX3g029194 | LOC_Os03g49180 | Os03g0698900 | - | Detail |
| C1H3g14380 | 3:26,196,374-26,200,891 | - | C2H3g06339 | CX3g027765 | LOC_Os03g49200 | Os03g0699100 | - | Detail |
| C1H3g06128 | 3:26,202,821-26,208,428 | + | C2H3g19400 | CX3g025779 | LOC_Os03g49210 | Os03g0699200 | - | Detail |
| C1H3g23737 | 3:26,208,949-26,212,072 | + | C2H3g05406 | CX3g029958 | LOC_Os03g49220 | Os03g0699300 | - | Detail |
| C1H3g16011 | 3:26,213,035-26,215,781 | - | C2H3g18347 | CX3g028209 | LOC_Os03g49230 | Os03g0699400 | - | Detail |
| C1H3g30535 | 3:26,218,732-26,220,224 | + | C2H3g00103 | CX3g029586 | LOC_Os03g49250 | Os03g0699600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g29177 | 2:27,727,327-27,728,047 | - | C1H2g10199 | CX2g023592 | LOC_Os02g49410 | Os02g0725900 | HAP3K, OsHAP3K/OsNF-YB1, OsHAP3K, OsNF-YB1, nf-yb1, OsLEC1, OsNF-YB-1, NFYB1, OsEnS-41 | Detail |
| C2H2g08490 | 2:27,734,464-27,735,258 | - | - | CX2g022300 | LOC_Os02g49420 | Os02g0726000 | - | Detail |
| C2H2g29636 | 2:27,742,313-27,743,152 | - | C1H2g09874 | CX2g023852 | LOC_Os02g49440 | Os02g0726300 | - | Detail |
| C2H2g05677 | 2:27,754,641-27,758,029 | + | C1H2g05214 | CX2g019656 | LOC_Os02g49450 | Os02g0726400 | - | Detail |
| C2H2g30015 | 2:27,761,753-27,765,830 | + | C1H2g12431 | CX2g023556 | LOC_Os02g49460 | Os02g0726500 | - | Detail |
| C2H2g00814 | 2:27,768,081-27,768,764 | + | - | CX2g024926 | LOC_Os02g49470 | Os02g0726600 | - | Detail |
| C2H2g09813 | 2:27,769,254-27,771,661 | - | C1H2g21836 | CX2g023944 | LOC_Os02g49480 | Os02g0726700 | OsbHLH034 | Detail |
| C2H2g17575 | 2:27,776,478-27,778,991 | - | C1H2g12455 | CX2g022260 | LOC_Os02g49510 | Os02g0727100 | - | Detail |
| C2H2g05996 | 2:27,780,509-27,785,880 | + | C1H2g29396 | CX2g024123 | LOC_Os02g49520 | Os02g0727300 | - | Detail |
| C2H2g05669 | 2:27,788,543-27,790,875 | - | C1H2g07912 | CX2g019961 | LOC_Os02g49530 | Os02g0727500 | - | Detail |
| C2H2g19256 | 2:27,794,670-27,795,602 | + | C1H2g26668 | CX2g023170 | LOC_Os02g49550 | Os02g0727700 | - | Detail |
| C2H2g25351 | 2:27,807,255-27,807,764 | + | C1H2g05141 | CX2g019013 | LOC_Os02g49560 | Os02g0728001 | bZIP43 | Detail |
| C2H2g28910 | 2:27,809,196-27,817,139 | - | C1H2g01405 | CX2g021134 | LOC_Os02g49570 | Os02g0728100 | - | Detail |
| C2H2g03568 | 2:27,818,993-27,819,614 | + | C1H2g31094 | CX2g022512 | LOC_Os02g49590 | Os02g0728300 | - | Detail |
| C2H2g16287 | 2:27,820,522-27,825,782 | + | C1H2g31094 | CX2g022649 | LOC_Os02g49590 | Os02g0728300 | - | Detail |
| C2H2g29677 | 2:27,820,568-27,821,645 | - | - | CX3g030699 | - | - | - | Detail |
| C2H2g04353 | 2:27,827,242-27,830,998 | - | C1H2g01710 | CX2g020763 | LOC_Os02g49600 | Os02g0728500 | - | Detail |
| C2H2g01821 | 2:27,834,839-27,836,806 | - | C1H2g15124 | CX2g020190 | LOC_Os02g49610 | Os02g0728600 | - | Detail |
| C2H2g11437 | 2:27,837,325-27,840,366 | + | C1H2g22353 | CX2g023333 | LOC_Os02g49620 | Os02g0728700 | - | Detail |
| C2H2g09268 | 2:27,841,086-27,847,518 | + | C1H2g30542 | CX2g023611 | LOC_Os02g49640 | Os02g0728800 | OsTET3 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |