| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g27366 | 3:25,593,481-25,596,090 | + | C2H3g13044 | CX3g027834 | LOC_Os03g48010 | Os03g0684500 | - | Detail |
| C1H3g15233 | 3:25,596,794-25,598,680 | - | C2H3g22552 | CX3g025275 | LOC_Os03g48030 | Os03g0684700 | - | Detail |
| C1H3g05365 | 3:25,602,648-25,604,750 | + | C2H3g24042 | CX3g030044 | LOC_Os03g48040 | Os03g0685000 | OsFdC2, OsHDY1 | Detail |
| C1H3g13814 | 3:25,608,977-25,611,480 | + | C2H3g04933 | CX3g026303 | LOC_Os03g48050 | Os03g0685100 | - | Detail |
| C1H3g01967 | 3:25,628,711-25,631,971 | + | C2H3g27897 | CX3g027858 | LOC_Os03g48060 | Os03g0685300 | FLO19 | Detail |
| C1H3g16679 | 3:25,637,779-25,641,456 | - | C2H3g26335 | CX3g028901 | LOC_Os03g48080 | Os03g0685500 | - | Detail |
| C1H3g01229 | 3:25,641,900-25,645,954 | - | C2H3g24853 | CX3g029151 | LOC_Os03g48090 | Os03g0685600 | - | Detail |
| C1H3g02003 | 3:25,645,977-25,646,372 | - | C2H3g18835 | - | - | - | - | Detail |
| C1H3g30763 | 3:25,646,548-25,659,506 | + | C2H3g08146 | CX3g027759 | - | - | - | Detail |
| C1H3g16754 | 3:25,660,235-25,660,525 | + | - | - | LOC_Os03g48110 | Os03g0685900 | - | Detail |
| C1H3g31689 | 3:25,666,295-25,679,368 | - | C2H3g06193 | CX3g025545 | LOC_Os03g48140 | Os03g0686300 | - | Detail |
| C1H3g17077 | 3:25,685,933-25,689,140 | + | C2H3g15650 | CX3g025241 | LOC_Os03g48160 | Os03g0253100 | - | Detail |
| C1H3g31064 | 3:25,690,701-25,695,188 | + | C2H3g12008 | CX3g025276 | LOC_Os03g48170 | Os03g0686900 | FLO6 | Detail |
| C1H3g04074 | 3:25,695,859-25,701,417 | - | C2H3g19404 | CX3g025668 | LOC_Os03g51050 | Os03g0687000 | OsNPF2.4, NPF2.4, OsPTR2, PTR2 | Detail |
| C1H3g27780 | 3:25,713,193-25,717,194 | - | C2H3g17935 | CX3g029198 | LOC_Os03g48190 | Os03g0687200 | - | Detail |
| C1H3g31647 | 3:25,721,830-25,722,576 | - | C2H3g13078 | CX3g029222 | LOC_Os03g48220 | Os03g0687700 | - | Detail |
| C1H3g02479 | 3:25,724,849-25,725,295 | - | C2H3g02466 | CX3g025750 | LOC_Os03g48225 | Os03g0687800 | - | Detail |
| C1H3g12014 | 3:25,727,294-25,728,022 | - | C2H3g05793 | CX3g028579 | LOC_Os03g48235 | Os03g0688000 | - | Detail |
| C1H3g12256 | 3:25,730,050-25,730,676 | - | C2H3g06136 | CX3g029222 | LOC_Os03g48220 | Os03g0687700 | - | Detail |
| C1H3g24497 | 3:25,732,258-25,737,184 | + | C2H3g19874 | CX3g029090 | LOC_Os03g48260 | Os03g0688200 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g19518 | 1:21,774,601-21,777,990 | + | C1H1g20054 | CX1g000139 | LOC_Os01g42730 | Os01g0612900 | - | Detail |
| C2H1g01711 | 1:21,800,669-21,803,011 | + | C1H1g16783 | CX1g001096 | LOC_Os01g42770 | Os01g0613300 | - | Detail |
| C2H1g08037 | 1:21,803,370-21,804,711 | - | C1H1g19620 | CX1g001646 | LOC_Os01g42780 | Os01g0613500 | - | Detail |
| C2H1g03375 | 1:21,813,410-21,815,151 | - | C1H1g09978 | CX1g001198 | LOC_Os01g42790 | Os01g0613800 | - | Detail |
| C2H1g08375 | 1:21,816,039-21,822,401 | - | C1H1g21693 | CX1g006583 | LOC_Os01g42800 | Os01g0613900 | - | Detail |
| C2H1g30219 | 1:21,824,251-21,827,416 | + | C1H1g30142 | CX1g005988 | LOC_Os01g42810 | Os01g0614300 | - | Detail |
| C2H1g12066 | 1:21,826,593-21,831,965 | - | C1H1g20243 | CX1g003302 | LOC_Os01g42820 | Os01g0614500 | - | Detail |
| C2H1g29942 | 1:21,836,014-21,840,403 | + | C1H1g30904 | CX1g001445 | LOC_Os01g42830 | Os01g0614700 | - | Detail |
| C2H1g10991 | 1:21,841,111-21,847,127 | - | C1H1g01885 | CX1g001663 | LOC_Os01g42850 | Os01g0614900 | - | Detail |
| C2H1g28283 | 1:21,850,948-21,851,151 | - | C1H1g14641 | CX1g001822 | LOC_Os01g42860 | Os01g0615050 | OCPI1 | Detail |
| C2H1g18656 | 1:21,856,522-21,858,273 | - | C1H1g14133 | CX1g002212 | LOC_Os01g42870 | Os01g0615200 | - | Detail |
| C2H1g17016 | 1:21,858,977-21,861,449 | - | C1H1g10409 | CX1g004428 | LOC_Os01g42880 | Os01g0615300 | - | Detail |
| C2H1g28413 | 1:21,881,235-21,889,463 | + | C1H1g29477 | CX1g005260 | LOC_Os01g42950 | Os01g0616100 | - | Detail |
| C2H1g04418 | 1:21,914,236-21,918,246 | + | C1H1g00446 | CX1g004354 | LOC_Os01g42960 | Os01g0616333 | - | Detail |
| C2H1g00927 | 1:21,925,021-21,931,565 | - | C1H1g28451 | CX1g002070 | LOC_Os01g42970 | Os01g0616400 | - | Detail |
| C2H1g26183 | 1:21,934,221-21,936,729 | + | C1H1g01886 | CX1g000783 | LOC_Os01g42980 | Os01g0616500 | - | Detail |
| C2H1g01334 | 1:21,942,567-21,948,906 | - | C1H1g27380 | CX1g005424 | LOC_Os01g43020 | Os01g0616900 | OsCTPS1 | Detail |
| C2H1g12553 | 1:21,976,809-21,990,595 | - | C1H1g02684 | CX1g007195 | LOC_Os01g43030 | Os01g0617500 | - | Detail |
| C2H1g03908 | 1:22,006,535-22,015,282 | + | C1H1g04403 | CX1g002530 | LOC_Os01g43050 | Os01g0617700 | - | Detail |
| C2H1g08569 | 1:22,016,043-22,017,690 | - | C1H1g00516 | CX1g000604 | LOC_Os01g43060 | Os01g0617800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |