| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g13118 | 3:25,046,504-25,048,967 | + | C2H3g29704 | CX3g029984 | LOC_Os03g47140 | Os03g0674700 | - | Detail |
| C1H3g07724 | 3:25,064,679-25,065,977 | - | C2H3g26505 | CX3g027378 | LOC_Os03g47190 | Os03g0675300 | - | Detail |
| C1H3g27197 | 3:25,095,431-25,095,840 | + | C2H3g22242 | CX3g028146 | LOC_Os03g47230 | Os03g0675600 | - | Detail |
| C1H3g14059 | 3:25,098,737-25,100,703 | + | C2H3g08949 | CX3g027716 | LOC_Os03g47240 | Os03g0675700 | - | Detail |
| C1H3g03770 | 3:25,122,455-25,123,501 | + | C2H3g30024 | CX3g025271 | LOC_Os03g47310 | Os03g0687700 | - | Detail |
| C1H3g06178 | 3:25,144,890-25,149,404 | - | C2H3g22513 | CX3g027660 | LOC_Os03g47360 | Os03g0677101 | - | Detail |
| C1H3g12211 | 3:25,151,231-25,152,096 | + | - | - | - | - | - | Detail |
| C1H3g22290 | 3:25,153,241-25,153,928 | + | C2H3g05304 | CX3g026799 | LOC_Os03g47370 | Os03g0663900 | EPAD1 | Detail |
| C1H3g17542 | 3:25,221,871-25,223,532 | + | C2H3g02490 | CX3g030452 | LOC_Os03g47500 | Os03g0678400 | - | Detail |
| C1H3g10676 | 3:25,243,268-25,244,394 | + | C2H3g13940 | CX3g029671 | LOC_Os03g47540 | Os03g0678950 | - | Detail |
| C1H3g02102 | 3:25,244,772-25,247,313 | - | C2H3g05697 | CX3g025861 | LOC_Os03g47550 | Os03g0679000 | - | Detail |
| C1H3g01260 | 3:25,252,492-25,254,444 | - | C2H3g07999 | - | LOC_Os03g47560 | Os03g0679100 | - | Detail |
| C1H3g29166 | 3:25,275,460-25,280,072 | - | C2H3g01612 | CX3g030786 | LOC_Os03g47580 | Os03g0679300 | - | Detail |
| C1H3g10616 | 3:25,286,739-25,295,091 | + | C2H3g01111 | CX3g031285 | LOC_Os03g47610 | Os03g0679700 | - | Detail |
| C1H3g20455 | 3:25,305,993-25,313,511 | + | C2H3g20804 | - | LOC_Os03g47640 | Os03g0680100 | - | Detail |
| C1H3g05229 | 3:25,315,895-25,323,966 | + | C2H3g30000 | - | LOC_Os03g47650 | Os03g0680200 | - | Detail |
| C1H3g13838 | 3:25,326,435-25,333,621 | + | C2H3g05641 | - | LOC_Os03g47686 | - | - | Detail |
| C1H3g07032 | 3:25,336,359-25,341,880 | + | C2H3g16174 | - | LOC_Os03g47686 | - | - | Detail |
| C1H3g02531 | 3:25,346,106-25,352,978 | + | C2H3g24906 | - | LOC_Os03g47693 | Os03g0680500 | - | Detail |
| C1H3g24845 | 3:25,370,491-25,379,311 | + | C2H3g27910 | CX1g004583 | LOC_Os03g47720 | Os03g0680600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H8g25703 | 8:20,900,751-20,903,749 | - | C1H8g29712 | CX8g052937 | LOC_Os08g39070 | Os08g0500000 | CSN6 | Detail |
| C2H8g28974 | 8:20,904,398-20,913,620 | + | C1H8g23809 | CX8g052978 | LOC_Os08g39080 | Os08g0500100 | OsPEX5, OsPEX5L, OsPex5pL, DFO2 | Detail |
| C2H8g12356 | 8:20,913,708-20,918,160 | - | C1H8g01766 | CX8g053563 | LOC_Os08g39090 | Os08g0500200 | - | Detail |
| C2H8g17818 | 8:20,918,776-20,923,407 | - | C1H8g05400 | CX8g050896 | LOC_Os08g39100 | Os08g0500300 | - | Detail |
| C2H8g20368 | 8:20,931,796-20,934,991 | + | C1H8g21551 | - | - | - | - | Detail |
| C2H8g05578 | 8:20,935,465-20,937,189 | + | C1H8g02184 | CX8g053603 | LOC_Os08g39130 | Os08g0500600 | - | Detail |
| C2H8g00249 | 8:20,937,742-20,942,198 | - | C1H8g04220 | CX8g053216 | LOC_Os08g39140 | Os08g0500700 | - | Detail |
| C2H8g02855 | 8:20,946,467-20,950,369 | + | C1H8g11855 | CX8g050505 | LOC_Os08g39150 | Os08g0500800 | - | Detail |
| C2H8g01384 | 8:20,950,845-20,952,747 | + | C1H8g07618 | CX8g054816 | LOC_Os08g39160 | Os08g0500900 | - | Detail |
| C2H8g19609 | 8:20,953,996-20,957,342 | - | C1H8g30278 | CX8g051831 | LOC_Os08g39240 | Os08g0378300 | - | Detail |
| C2H8g10441 | 8:20,966,357-20,970,499 | - | C1H8g30278 | CX8g052582 | LOC_Os08g39240 | Os08g0378300 | - | Detail |
| C2H8g17157 | 8:20,974,407-20,979,012 | - | C1H8g29076 | CX8g051811 | LOC_Os08g39210 | Os08g0501500 | - | Detail |
| C2H8g03751 | 8:20,980,535-20,983,428 | + | C1H8g17153 | CX8g051050 | LOC_Os08g39220 | Os08g0501600 | - | Detail |
| C2H8g30060 | 8:20,987,673-20,994,431 | + | C1H8g30278 | CX8g051831 | LOC_Os08g39240 | Os08g0501088 | - | Detail |
| C2H8g12308 | 8:21,010,664-21,019,202 | - | C1H8g03403 | CX8g054560 | LOC_Os08g39250 | Os08g0502000 | OsEDM2L | Detail |
| C2H8g27725 | 8:21,030,093-21,033,126 | - | C1H8g30176 | CX8g051684 | LOC_Os08g39270 | Os08g0502400 | - | Detail |
| C2H8g14081 | 8:21,038,238-21,038,660 | + | C1H9g25042 | CX8g050457 | LOC_Os08g39290 | Os08g0502600 | - | Detail |
| C2H8g04600 | 8:21,039,087-21,041,843 | - | C1H8g14841 | CX8g050547 | LOC_Os08g39300 | Os08g0502700 | - | Detail |
| C2H8g10886 | 8:21,052,217-21,056,630 | + | C1H8g18375 | CX8g052337 | LOC_Os08g39310 | Os08g0502800 | - | Detail |
| C2H8g01349 | 8:21,057,411-21,058,604 | - | C1H8g26411 | CX8g051784 | LOC_Os08g39320 | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |