| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g13118 | 3:25,046,504-25,048,967 | + | C2H3g29704 | CX3g029984 | LOC_Os03g47140 | Os03g0674700 | - | Detail |
| C1H3g07724 | 3:25,064,679-25,065,977 | - | C2H3g26505 | CX3g027378 | LOC_Os03g47190 | Os03g0675300 | - | Detail |
| C1H3g27197 | 3:25,095,431-25,095,840 | + | C2H3g22242 | CX3g028146 | LOC_Os03g47230 | Os03g0675600 | - | Detail |
| C1H3g14059 | 3:25,098,737-25,100,703 | + | C2H3g08949 | CX3g027716 | LOC_Os03g47240 | Os03g0675700 | - | Detail |
| C1H3g03770 | 3:25,122,455-25,123,501 | + | C2H3g30024 | CX3g025271 | LOC_Os03g47310 | Os03g0687700 | - | Detail |
| C1H3g06178 | 3:25,144,890-25,149,404 | - | C2H3g22513 | CX3g027660 | LOC_Os03g47360 | Os03g0677101 | - | Detail |
| C1H3g12211 | 3:25,151,231-25,152,096 | + | - | - | - | - | - | Detail |
| C1H3g22290 | 3:25,153,241-25,153,928 | + | C2H3g05304 | CX3g026799 | LOC_Os03g47370 | Os03g0663900 | EPAD1 | Detail |
| C1H3g17542 | 3:25,221,871-25,223,532 | + | C2H3g02490 | CX3g030452 | LOC_Os03g47500 | Os03g0678400 | - | Detail |
| C1H3g10676 | 3:25,243,268-25,244,394 | + | C2H3g13940 | CX3g029671 | LOC_Os03g47540 | Os03g0678950 | - | Detail |
| C1H3g02102 | 3:25,244,772-25,247,313 | - | C2H3g05697 | CX3g025861 | LOC_Os03g47550 | Os03g0679000 | - | Detail |
| C1H3g01260 | 3:25,252,492-25,254,444 | - | C2H3g07999 | - | LOC_Os03g47560 | Os03g0679100 | - | Detail |
| C1H3g29166 | 3:25,275,460-25,280,072 | - | C2H3g01612 | CX3g030786 | LOC_Os03g47580 | Os03g0679300 | - | Detail |
| C1H3g10616 | 3:25,286,739-25,295,091 | + | C2H3g01111 | CX3g031285 | LOC_Os03g47610 | Os03g0679700 | - | Detail |
| C1H3g20455 | 3:25,305,993-25,313,511 | + | C2H3g20804 | - | LOC_Os03g47640 | Os03g0680100 | - | Detail |
| C1H3g05229 | 3:25,315,895-25,323,966 | + | C2H3g30000 | - | LOC_Os03g47650 | Os03g0680200 | - | Detail |
| C1H3g13838 | 3:25,326,435-25,333,621 | + | C2H3g05641 | - | LOC_Os03g47686 | - | - | Detail |
| C1H3g07032 | 3:25,336,359-25,341,880 | + | C2H3g16174 | - | LOC_Os03g47686 | - | - | Detail |
| C1H3g02531 | 3:25,346,106-25,352,978 | + | C2H3g24906 | - | LOC_Os03g47693 | Os03g0680500 | - | Detail |
| C1H3g24845 | 3:25,370,491-25,379,311 | + | C2H3g27910 | CX1g004583 | LOC_Os03g47720 | Os03g0680600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g14212 | 6:23,880,261-23,885,110 | + | C1H6g25709 | CX6g044060 | LOC_Os06g45350 | Os06g0663900 | - | Detail |
| C2H6g28732 | 6:23,886,959-23,887,444 | + | C1H6g04386 | CX6g045376 | - | - | - | Detail |
| C2H6g14654 | 6:23,887,563-23,887,994 | + | - | CX6g042007 | - | - | - | Detail |
| C2H6g24826 | 6:23,888,960-23,897,290 | - | C1H6g08767 | CX6g044758 | LOC_Os06g45360 | Os06g0664100 | - | Detail |
| C2H6g00789 | 6:23,898,594-23,900,645 | - | C1H6g30945 | CX6g042887 | LOC_Os06g45370 | Os06g0664200 | - | Detail |
| C2H6g19748 | 6:23,911,086-23,918,353 | + | C1H6g08586 | CX6g042503 | LOC_Os06g45380 | Os06g0664300 | OsVSR6 | Detail |
| C2H6g01763 | 6:23,919,012-23,922,207 | - | C1H6g03094 | CX6g044595 | LOC_Os06g45390 | Os06g0664400 | - | Detail |
| C2H6g14833 | 6:23,930,926-23,934,033 | + | C1H6g02505 | CX6g045983 | LOC_Os06g45410 | Os06g0664800 | - | Detail |
| C2H6g00067 | 6:23,940,397-23,943,931 | + | C1H6g15108 | CX6g041356 | LOC_Os06g45430 | Os06g0665000 | - | Detail |
| C2H6g17880 | 6:23,944,171-23,945,974 | - | C1H6g06152 | CX6g041675 | LOC_Os06g45440 | Os06g0665100 | - | Detail |
| C2H6g03277 | 6:23,947,369-23,948,616 | - | C1H6g22830 | CX6g045958 | LOC_Os06g45450 | Os06g0665200 | - | Detail |
| C2H6g02226 | 6:23,955,196-23,956,507 | - | C1H6g16253 | CX6g045292 | LOC_Os06g45460 | Os06g0665400 | APO1, apo1(t), apo1, SCM2, SCM2/APO1, OsFbox321, Os_F0393 | Detail |
| C2H6g26324 | 6:23,973,298-23,977,524 | - | C1H6g09339 | CX6g042079 | LOC_Os06g45480 | Os06g0665500 | OsAAH | Detail |
| C2H6g03492 | 6:23,986,409-23,992,441 | - | C1H6g29065 | CX6g045639 | LOC_Os06g45500 | Os06g0665800 | HMA9, OsHMA9 ,oshma9-1, oshma9-2, HMA9 | Detail |
| C2H6g11562 | 6:24,002,574-24,004,562 | + | C1H6g18112 | CX6g045580 | LOC_Os06g45510 | Os06g0665900 | - | Detail |
| C2H6g00145 | 6:24,017,803-24,021,672 | + | C1H6g21015 | CX6g042910 | LOC_Os06g45540 | Os06g0666100 | SG6, GL6 | Detail |
| C2H6g07620 | 6:24,062,305-24,066,031 | - | C1H6g25662 | CX6g043004 | LOC_Os06g45590 | Os06g0666600 | - | Detail |
| C2H6g17606 | 6:24,085,963-24,086,711 | - | C1H6g10238 | CX6g042443 | LOC_Os06g45620 | - | - | Detail |
| C2H6g04019 | 6:24,121,466-24,122,742 | + | C1H6g29682 | CX6g045638 | LOC_Os06g45650 | Os06g0667200 | MADS30, OsMADS30 | Detail |
| C2H6g21989 | 6:24,138,577-24,140,168 | + | C1H6g03334 | CX6g045305 | LOC_Os06g45660 | Os06g0667500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |