| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g19695 | 3:24,331,729-24,334,000 | + | C2H3g01171 | CX3g026935 | LOC_Os03g45750 | Os03g0659700 | - | Detail |
| C1H3g28197 | 3:24,334,497-24,337,432 | - | C2H3g24902 | CX3g026095 | LOC_Os03g45760 | Os03g0659800 | - | Detail |
| C1H3g28109 | 3:24,338,385-24,345,598 | - | C2H3g00978 | CX3g025786 | LOC_Os03g45770 | Os03g0659900 | - | Detail |
| C1H3g20654 | 3:24,353,932-24,354,291 | - | C2H3g13984 | CX3g025578 | LOC_Os03g45800 | Os03g0660400 | - | Detail |
| C1H3g08111 | 3:24,368,303-24,368,623 | + | C2H3g28162 | CX3g028895 | LOC_Os03g45830 | Os03g0660300 | - | Detail |
| C1H3g26323 | 3:24,376,226-24,376,534 | + | C2H3g17830 | CX3g028895 | LOC_Os03g45850 | Os03g0660400 | - | Detail |
| C1H3g15531 | 3:24,381,877-24,382,179 | + | C2H3g00293 | CX3g025578 | LOC_Os03g45860 | Os03g0660500 | - | Detail |
| C1H3g22914 | 3:24,399,464-24,400,773 | - | C2H3g01118 | CX3g026002 | LOC_Os03g45870 | Os03g0660700 | - | Detail |
| C1H3g16718 | 3:24,431,135-24,436,372 | + | C2H3g16487 | CX3g030219 | LOC_Os03g45920 | Os03g0661300 | TUB8, OsTUB8, TUBB8 | Detail |
| C1H3g24127 | 3:24,460,665-24,461,481 | - | C2H3g01668 | - | - | - | - | Detail |
| C1H3g08409 | 3:24,463,925-24,469,707 | + | C2H3g29758 | CX3g028179 | LOC_Os03g46040 | Os03g0663100 | - | Detail |
| C1H3g13489 | 3:24,471,120-24,471,800 | - | C2H3g29429 | CX3g030670 | LOC_Os03g46060 | Os03g0663400 | - | Detail |
| C1H3g28997 | 3:24,472,691-24,473,380 | - | C2H3g20889 | CX3g026067 | LOC_Os03g46070 | Os03g0663500 | - | Detail |
| C1H3g12643 | 3:24,496,785-24,501,748 | + | C2H3g27587 | CX3g030773 | LOC_Os03g46090 | Os03g0663700 | - | Detail |
| C1H3g29144 | 3:24,504,198-24,506,315 | - | C2H3g16281 | CX3g031226 | LOC_Os03g46100 | Os03g0663800 | FLOC1 | Detail |
| C1H3g10937 | 3:24,507,427-24,509,825 | - | C2H3g05304 | CX3g026799 | LOC_Os03g46110 | Os03g0663900 | EPAD1 | Detail |
| C1H3g22844 | 3:24,514,153-24,521,851 | + | C2H3g13262 | CX3g030100 | LOC_Os03g46120 | Os03g0664400 | - | Detail |
| C1H3g18639 | 3:24,523,571-24,524,267 | - | - | - | - | - | - | Detail |
| C1H3g05960 | 3:24,528,880-24,529,662 | + | C2H3g25255 | CX3g026593 | LOC_Os03g46180 | Os03g0664600 | - | Detail |
| C1H3g08349 | 3:24,529,784-24,533,340 | - | C2H3g30526 | CX3g028782 | LOC_Os03g46190 | Os03g0664700 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g27162 | 9:19,021,887-19,023,725 | - | C1H9g18815 | CX9g057033 | LOC_Os09g38920 | Os09g0497500 | - | Detail |
| C2H9g03456 | 9:19,024,895-19,026,937 | - | C1H9g04134 | CX9g057411 | LOC_Os09g38930 | Os09g0562750 | - | Detail |
| C2H9g09986 | 9:19,040,180-19,040,616 | + | C1H9g07046 | CX9g055362 | LOC_Os09g38670 | Os09g0559600 | - | Detail |
| C2H9g06709 | 9:19,042,621-19,048,413 | - | C1H9g06523 | CX9g055046 | LOC_Os09g38960 | Os09g0563200 | OsHAK18 | Detail |
| C2H9g01538 | 9:19,051,561-19,057,154 | + | C1H9g19754 | CX9g057500 | LOC_Os09g38970 | Os09g0563250 | - | Detail |
| C2H9g16021 | 9:19,057,688-19,061,764 | + | C1H9g21219 | CX9g054934 | LOC_Os09g38980 | Os09g0563300 | TCD9, OsCPn60alpha3, OsCPn60α3 | Detail |
| C2H9g21433 | 9:19,071,960-19,074,845 | + | C1H9g01697 | CX9g056918 | LOC_Os09g39020 | Os09g0563700 | - | Detail |
| C2H9g26806 | 9:19,076,762-19,086,439 | - | C1H9g21274 | CX9g057338 | LOC_Os09g39034 | Os09g0563800 | - | Detail |
| C2H9g27013 | 9:19,092,614-19,094,426 | - | C1H9g07375 | CX9g058103 | LOC_Os09g39060 | Os09g0564000 | - | Detail |
| C2H9g21279 | 9:19,098,085-19,100,923 | - | C1H9g22045 | CX9g058103 | LOC_Os09g39070 | Os09g0564200 | - | Detail |
| C2H9g23865 | 9:19,108,617-19,110,153 | - | C1H9g22045 | CX9g058103 | LOC_Os09g39090 | Os09g0564400 | - | Detail |
| C2H9g13270 | 9:19,121,816-19,124,616 | - | C1H9g22045 | CX9g058103 | LOC_Os09g39110 | Os09g0564600 | - | Detail |
| C2H9g00317 | 9:19,126,925-19,128,682 | - | C1H9g27358 | CX9g058103 | LOC_Os09g39120 | Os09g0564700 | - | Detail |
| C2H9g01274 | 9:19,137,269-19,139,208 | - | C1H9g06269 | CX9g058103 | LOC_Os09g39160 | Os09g0565000 | - | Detail |
| C2H9g29707 | 9:19,176,003-19,178,915 | + | C1H9g06269 | CX9g058103 | LOC_Os09g39160 | Os09g0565000 | - | Detail |
| C2H9g17980 | 9:19,186,630-19,189,149 | - | C1H9g03665 | CX9g055784 | LOC_Os09g39180 | Os09g0565200 | OsCRP1 | Detail |
| C2H9g06735 | 9:19,189,868-19,191,873 | - | C1H9g23294 | CX9g055878 | LOC_Os09g39190 | Os09g0565300 | - | Detail |
| C2H9g05243 | 9:19,193,569-19,195,287 | - | C1H9g02800 | CX9g055878 | LOC_Os09g39190 | Os09g0565350 | - | Detail |
| C2H9g29461 | 9:19,195,507-19,199,219 | - | C1H9g15519 | CX9g056354 | LOC_Os09g39200 | Os09g0565400 | - | Detail |
| C2H9g27919 | 9:19,201,190-19,217,268 | + | C1H9g26476 | CX9g057714 | - | Os09g0565500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |