| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g15946 | 3:23,583,390-23,583,979 | - | C2H4g20465 | CX3g030879 | - | - | - | Detail |
| C1H3g02767 | 3:23,610,056-23,614,292 | + | C2H3g11048 | CX3g027204 | LOC_Os03g44420 | Os03g0646100 | - | Detail |
| C1H3g15306 | 3:23,617,270-23,620,653 | + | C2H3g09160 | CX3g030130 | LOC_Os03g44440 | Os03g0646300 | OsCNGC4 | Detail |
| C1H3g01932 | 3:23,622,459-23,623,244 | - | C2H3g09347 | CX3g029288 | LOC_Os03g44450 | Os03g0646400 | - | Detail |
| C1H3g04677 | 3:23,627,570-23,636,068 | + | C2H3g17378 | CX3g025480 | LOC_Os03g44484 | Os03g0646800 | - | Detail |
| C1H3g15319 | 3:23,636,428-23,645,365 | - | C2H3g09600 | CX3g030610 | LOC_Os03g44500 | Os03g0646900 | OsPPKL1, GL3.1 | Detail |
| C1H3g31672 | 3:23,657,526-23,660,925 | - | C2H3g20933 | CX3g028021 | LOC_Os03g44530 | Os03g0647500 | - | Detail |
| C1H3g00783 | 3:23,663,885-23,669,173 | - | C2H3g08581 | CX3g025465 | LOC_Os03g44540 | Os03g0647600 | OsNF-YA3, HAP2H | Detail |
| C1H3g28506 | 3:23,684,930-23,688,636 | - | C2H3g28034 | CX3g026616 | LOC_Os03g44560 | Os03g0647800 | - | Detail |
| C1H3g04139 | 3:23,703,224-23,709,578 | - | C2H3g20748 | CX3g026899 | LOC_Os03g44610 | Os03g0648300 | - | Detail |
| C1H3g01950 | 3:23,714,271-23,718,047 | + | C2H3g20479 | CX3g030255 | LOC_Os03g44620 | Os03g0648400 | - | Detail |
| C1H3g13484 | 3:23,718,235-23,718,780 | - | C2H3g07590 | CX3g030166 | LOC_Os03g44630 | Os03g0648500 | - | Detail |
| C1H3g12327 | 3:23,741,182-23,744,838 | + | C2H3g02590 | CX3g030053 | LOC_Os03g44660 | Os03g0648900 | - | Detail |
| C1H3g07360 | 3:23,746,379-23,749,824 | - | C2H3g08448 | CX3g030188 | LOC_Os03g44670 | Os03g0649000 | - | Detail |
| C1H3g11970 | 3:23,770,748-23,771,623 | + | C2H3g18182 | CX3g028790 | - | - | - | Detail |
| C1H3g00053 | 3:23,796,202-23,806,042 | + | C2H3g11794 | CX3g029987 | LOC_Os03g44710 | Os03g0650000 | - | Detail |
| C1H3g08255 | 3:23,853,350-23,859,840 | + | C2H3g05995 | CX3g025417 | LOC_Os03g44760 | Os03g0650400 | OsAM1 | Detail |
| C1H3g04288 | 3:23,865,917-23,869,003 | + | C2H3g04123 | CX3g029305 | LOC_Os03g44780 | Os03g0650700 | - | Detail |
| C1H3g26002 | 3:23,876,596-23,879,817 | + | C2H3g25934 | CX3g030102 | LOC_Os03g44800 | Os03g0650800 | - | Detail |
| C1H3g15894 | 3:23,880,948-23,883,516 | - | C2H3g09215 | CX3g025882 | LOC_Os03g44810 | Os03g0650900 | OsNLA2 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g08417 | 2:2,303,926-2,311,206 | + | C1H2g01626 | CX2g022091 | LOC_Os02g05040 | Os02g0143200 | - | Detail |
| C2H2g29044 | 2:2,326,035-2,331,705 | + | C1H2g20326 | - | - | - | - | Detail |
| C2H2g15830 | 2:2,331,756-2,337,013 | + | C1H2g05324 | CX2g020466 | LOC_Os02g05310 | Os02g0146400 | - | Detail |
| C2H2g06566 | 2:2,337,342-2,342,078 | + | C1H2g12282 | CX2g020302 | LOC_Os02g05320 | Os02g0146500 | - | Detail |
| C2H2g08642 | 2:2,344,474-2,347,835 | + | C1H2g18676 | CX2g020037 | LOC_Os02g05330 | Os02g0146600 | OseIF4A | Detail |
| C2H2g07340 | 2:2,351,364-2,359,090 | + | C1H2g28134 | CX2g019608 | LOC_Os02g05340 | Os02g0146700 | - | Detail |
| C2H2g09483 | 2:2,361,124-2,361,397 | + | - | - | - | - | - | Detail |
| C2H2g18915 | 2:2,361,453-2,365,801 | + | C1H2g16834 | CX2g022971 | LOC_Os02g05365 | Os02g0147700 | - | Detail |
| C2H2g16746 | 2:2,367,495-2,373,379 | + | C1H2g17406 | CX2g021512 | LOC_Os02g05450 | Os02g0147800 | - | Detail |
| C2H2g05031 | 2:2,385,281-2,388,231 | + | C1H2g03103 | CX2g019418 | LOC_Os02g05470 | Os02g0148000 | - | Detail |
| C2H2g17640 | 2:2,389,987-2,393,274 | - | C1H2g11400 | CX2g020633 | LOC_Os02g05480 | Os02g0148100 | OsMAPK14, OsMPK3, OsMAPK33 | Detail |
| C2H2g26711 | 2:2,398,964-2,409,479 | + | C1H2g29322 | CX2g019230 | LOC_Os02g05490 | Os02g0148300 | - | Detail |
| C2H2g18156 | 2:2,410,020-2,412,843 | + | C1H2g28836 | CX2g021446 | LOC_Os02g05500 | Os02g0148400 | - | Detail |
| C2H2g30595 | 2:2,414,221-2,417,726 | + | C1H2g30011 | CX2g024552 | LOC_Os02g05510 | Os02g0148500 | - | Detail |
| C2H2g05427 | 2:2,418,499-2,420,814 | + | C1H2g12590 | CX2g023405 | LOC_Os02g05520 | Os02g0148600 | - | Detail |
| C2H2g26407 | 2:2,427,921-2,428,679 | + | C1H2g04797 | CX2g022702 | LOC_Os02g05600 | Os02g0149500 | - | Detail |
| C2H2g19048 | 2:2,434,730-2,439,152 | + | C1H2g28291 | CX2g024920 | LOC_Os02g05610 | Os02g0149600 | - | Detail |
| C2H2g28510 | 2:2,449,680-2,452,843 | + | C1H2g12792 | CX2g021786 | LOC_Os02g05630 | Os02g0149800 | OsPP2C10, PP2C10, OsPP18 | Detail |
| C2H2g30382 | 2:2,464,142-2,465,378 | + | C1H2g24221 | CX2g022836 | LOC_Os02g05640 | Os02g0149900 | - | Detail |
| C2H2g12819 | 2:2,467,140-2,469,636 | - | C1H2g30137 | CX2g019305 | LOC_Os02g05650 | Os02g0150000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |