| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g01904 | 3:23,403,891-23,405,834 | - | C2H3g07109 | CX3g026785 | LOC_Os03g52310 | Os03g0563400 | - | Detail |
| C1H3g20730 | 3:23,405,921-23,407,174 | - | C2H3g21207 | CX3g027695 | LOC_Os03g52310 | Os03g0563400 | - | Detail |
| C1H3g06671 | 3:23,407,184-23,408,387 | - | C2H3g10008 | - | - | Os03g0264950 | - | Detail |
| C1H3g27594 | 3:23,409,332-23,409,727 | - | C2H3g18503 | - | - | - | - | Detail |
| C1H3g09156 | 3:23,411,289-23,416,517 | - | C2H3g26081 | CX3g026196 | LOC_Os03g44050 | Os03g0642600 | - | Detail |
| C1H3g16503 | 3:23,420,216-23,424,022 | - | C2H3g02709 | CX12g016225 | LOC_Os03g44100 | Os03g0642900 | - | Detail |
| C1H3g13161 | 3:23,427,932-23,428,816 | - | C2H3g02627 | CX12g016225 | LOC_Os03g44100 | Os03g0642900 | - | Detail |
| C1H3g16103 | 3:23,431,780-23,434,579 | - | C2H3g02709 | CX12g016225 | LOC_Os03g44140 | Os03g0643000 | - | Detail |
| C1H3g12435 | 3:23,437,347-23,438,414 | - | - | - | - | - | - | Detail |
| C1H3g14328 | 3:23,438,955-23,448,780 | - | C2H3g22187 | CX3g030764 | LOC_Os03g44140 | Os03g0643250 | - | Detail |
| C1H3g15657 | 3:23,450,007-23,453,859 | - | C2H3g09910 | CX3g026745 | LOC_Os03g44150 | Os03g0643300 | OsOAT | Detail |
| C1H3g26318 | 3:23,459,971-23,465,367 | + | C2H3g18518 | CX3g026309 | LOC_Os03g44200 | Os03g0644000 | ATG6B, OsATG6b, OsATG6c | Detail |
| C1H3g21507 | 3:23,465,498-23,470,402 | - | C2H3g26037 | CX3g028043 | LOC_Os03g44210 | Os03g0644200 | WAL3 | Detail |
| C1H3g30497 | 3:23,478,079-23,482,022 | - | C2H3g15139 | CX3g027891 | LOC_Os03g44230 | Os03g0644400 | - | Detail |
| C1H3g01739 | 3:23,488,305-23,489,490 | + | - | - | - | - | - | Detail |
| C1H3g27278 | 3:23,510,948-23,512,494 | + | C2H3g27117 | CX3g031229 | LOC_Os03g44260 | Os03g0644700 | - | Detail |
| C1H3g27224 | 3:23,519,082-23,521,962 | + | C2H3g12166 | CX3g025553 | LOC_Os03g44290 | Os03g0645000 | - | Detail |
| C1H3g30344 | 3:23,527,261-23,527,632 | + | - | CX3g027088 | - | - | - | Detail |
| C1H3g23863 | 3:23,530,249-23,532,923 | + | C2H3g18553 | CX3g025383 | LOC_Os03g44300 | Os03g0645100 | - | Detail |
| C1H3g29402 | 3:23,533,339-23,538,549 | - | C2H3g29997 | CX3g028384 | LOC_Os03g44310 | Os03g0645200 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H12g22484 | 12:3,640,646-3,642,047 | + | C1H12g23790 | CX12g016891 | LOC_Os12g07870 | Os12g0178300 | - | Detail |
| C2H12g05631 | 12:3,648,087-3,648,886 | + | C1H12g07292 | CX12g016814 | LOC_Os12g07860 | Os12g0178500 | - | Detail |
| C2H12g02192 | 12:3,652,250-3,653,447 | + | C1H12g24577 | CX12g016891 | LOC_Os12g07870 | Os12g0178600 | - | Detail |
| C2H12g21098 | 12:3,656,850-3,660,239 | - | C1H12g17071 | CX12g015086 | LOC_Os12g07874 | Os12g0178633 | - | Detail |
| C2H12g02500 | 12:3,660,529-3,668,229 | - | C1H12g18320 | CX12g017490 | LOC_Os12g07880 | Os12g0178700 | - | Detail |
| C2H12g00295 | 12:3,693,780-3,696,692 | + | C1H12g07184 | CX12g016092 | LOC_Os12g07940 | Os12g0179700 | - | Detail |
| C2H12g26161 | 12:3,698,630-3,703,537 | - | C1H12g23566 | CX12g015985 | LOC_Os12g07950 | Os12g0179800 | OsSRT2, OsSRT702, OsSIR2b | Detail |
| C2H12g18895 | 12:3,705,969-3,710,484 | - | C1H12g06847 | CX12g015985 | LOC_Os12g07950 | Os12g0179800 | OsSRT2, OsSRT702, OsSIR2b | Detail |
| C2H12g10711 | 12:3,718,465-3,723,372 | + | C1H12g04084 | CX12g017443 | LOC_Os12g07970 | Os12g0180100 | - | Detail |
| C2H12g00531 | 12:3,724,707-3,727,561 | - | C1H12g26935 | CX12g016892 | LOC_Os12g07990 | Os12g0180500 | - | Detail |
| C2H12g26846 | 12:3,736,344-3,737,508 | - | C1H12g24025 | CX12g017341 | LOC_Os12g08070 | Os12g0181300 | - | Detail |
| C2H12g15436 | 12:3,748,397-3,750,353 | + | C1H12g30820 | CX12g015947 | LOC_Os12g08090 | Os12g0181500 | OsAAP11A, AAP11A, OsAAP16, AAP16 | Detail |
| C2H12g22492 | 12:3,761,034-3,763,011 | - | C1H12g24779 | CX12g016463 | LOC_Os12g08090 | Os12g0181500 | OsAAP11A, AAP11A, OsAAP16, AAP16 | Detail |
| C2H12g23384 | 12:3,788,607-3,789,599 | - | C1H12g17913 | - | LOC_Os12g08160 | Os12g0182100 | - | Detail |
| C2H12g19835 | 12:3,790,180-3,795,093 | - | C1H12g10186 | CX12g017548 | LOC_Os12g08170 | Os12g0182200 | - | Detail |
| C2H12g22418 | 12:3,796,599-3,800,942 | - | C1H12g04557 | CX12g017738 | LOC_Os12g08180 | Os12g0182300 | SPL36 | Detail |
| C2H12g16765 | 12:3,811,386-3,811,872 | - | C1H12g20756 | CX12g016669 | LOC_Os12g08210 | Os12g0182600 | - | Detail |
| C2H12g28848 | 12:3,812,379-3,816,786 | + | C1H12g24787 | CX12g016799 | LOC_Os12g08220 | Os12g0182700 | HDAC10, OsHDAC10, HDA714 | Detail |
| C2H12g00347 | 12:3,818,809-3,820,613 | + | C1H12g14015 | CX12g015810 | LOC_Os12g08230 | Os12g0182800 | - | Detail |
| C2H12g26410 | 12:3,822,766-3,826,716 | + | C1H12g08117 | CX12g015556 | LOC_Os12g08260 | Os12g0183100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |