| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g17802 | 3:23,008,739-23,012,439 | + | C2H3g26963 | CX3g027391 | LOC_Os03g43670 | Os03g0637800 | OsCR4, MIS2 | Detail |
| C1H3g08726 | 3:23,017,635-23,026,652 | - | C2H3g21555 | CX3g029790 | LOC_Os03g43684 | Os03g0638000 | - | Detail |
| C1H3g11114 | 3:23,044,882-23,049,405 | + | C2H3g25520 | CX3g028463 | LOC_Os03g43720 | Os03g0638200 | - | Detail |
| C1H3g15945 | 3:23,051,002-23,058,423 | - | C2H3g16047 | CX3g029266 | LOC_Os03g43730 | Os03g0638300 | - | Detail |
| C1H3g27096 | 3:23,068,740-23,073,679 | + | C2H3g25175 | CX3g026087 | LOC_Os03g43760 | Os03g0638800 | - | Detail |
| C1H3g11228 | 3:23,109,368-23,125,685 | + | C2H3g20789 | CX3g027536 | LOC_Os03g43800 | - | - | Detail |
| C1H3g08955 | 3:23,136,890-23,137,938 | + | C2H3g02886 | CX3g030991 | LOC_Os03g43810 | Os03g0639300 | OsBP5 | Detail |
| C1H3g23874 | 3:23,138,323-23,139,044 | + | C2H3g02886 | CX3g030991 | LOC_Os03g43810 | Os03g0782500 | PIL13, OsPIL1, OsPIL13, OsbHLH152 | Detail |
| C1H3g03720 | 3:23,224,460-23,228,334 | - | C2H3g22381 | CX3g029268 | LOC_Os03g43840 | Os03g0639600 | - | Detail |
| C1H3g07222 | 3:23,232,911-23,237,552 | + | C2H3g06362 | CX3g025724 | LOC_Os03g43850 | Os03g0639700 | - | Detail |
| C1H3g11773 | 3:23,237,853-23,241,042 | - | C2H3g24990 | CX3g027146 | LOC_Os03g43860 | Os03g0639800 | OsVPS2 | Detail |
| C1H3g13764 | 3:23,270,774-23,278,329 | - | C2H3g01125 | CX3g026102 | LOC_Os03g43890 | Os03g0640100 | OsMSI1 | Detail |
| C1H3g15764 | 3:23,279,567-23,279,926 | - | C2H3g20329 | - | LOC_Os03g43910 | Os03g0640400 | LO9-177 | Detail |
| C1H3g09832 | 3:23,283,146-23,284,835 | - | C2H3g06880 | CX3g025959 | LOC_Os03g43900 | Os03g0640300 | - | Detail |
| C1H3g02135 | 3:23,288,535-23,291,333 | - | C2H3g28747 | - | LOC_Os03g43910 | Os03g0640400 | LO9-177 | Detail |
| C1H3g29126 | 3:23,299,509-23,305,320 | - | C2H3g10248 | CX3g025023 | LOC_Os03g43930 | Os03g0640800 | - | Detail |
| C1H3g01593 | 3:23,340,240-23,345,639 | - | C2H3g24666 | CX3g029177 | LOC_Os03g43970 | Os03g0641200 | - | Detail |
| C1H3g28158 | 3:23,350,428-23,355,402 | - | C2H3g08449 | CX3g025757 | LOC_Os03g43990 | Os03g0767600 | - | Detail |
| C1H3g19477 | 3:23,366,411-23,368,627 | + | C2H3g00183 | CX3g030013 | LOC_Os03g44000 | Os03g0641500 | - | Detail |
| C1H3g24950 | 3:23,372,807-23,375,538 | + | C2H3g23644 | CX3g028634 | LOC_Os03g44010 | Os03g0641700 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H8g28496 | 8:17,534,652-17,547,555 | + | C1H8g14706 | CX8g050823 | LOC_Os08g33076 | Os08g0427300 | - | Detail |
| C2H8g24900 | 8:17,548,124-17,551,328 | - | C1H8g11089 | CX8g053354 | LOC_Os08g33090 | Os08g0427600 | - | Detail |
| C2H8g16122 | 8:17,555,121-17,555,745 | + | C1H8g30701 | CX8g051559 | LOC_Os08g33100 | Os08g0427700 | - | Detail |
| C2H8g11913 | 8:17,560,140-17,560,394 | + | C1H8g13247 | CX8g052058 | LOC_Os08g33110 | Os08g0427800 | - | Detail |
| C2H8g12478 | 8:17,561,217-17,565,503 | - | C1H8g15468 | - | LOC_Os08g33120 | Os08g0427900 | - | Detail |
| C2H8g18856 | 8:17,574,651-17,578,714 | + | C1H8g07446 | - | LOC_Os08g33140 | Os08g0428100 | - | Detail |
| C2H8g08349 | 8:17,580,770-17,581,650 | + | C1H8g23894 | - | - | - | - | Detail |
| C2H8g02586 | 8:17,586,761-17,588,041 | + | C1H8g04533 | CX8g053117 | LOC_Os08g33150 | Os08g0428200 | Os2R_MYB76 | Detail |
| C2H8g25071 | 8:17,605,173-17,605,648 | - | C1H8g11968 | CX8g052726 | - | - | - | Detail |
| C2H8g17814 | 8:17,612,051-17,615,172 | - | C1H8g31336 | CX8g050680 | LOC_Os08g33160 | Os08g0428400 | - | Detail |
| C2H8g14531 | 8:17,644,268-17,644,882 | - | C1H8g29834 | CX8g054459 | LOC_Os08g33190 | Os08g0428800 | - | Detail |
| C2H8g22179 | 8:17,663,716-17,670,626 | - | C1H8g16602 | CX8g050807 | LOC_Os08g33200 | Os08g0428900 | - | Detail |
| C2H8g04273 | 8:17,695,913-17,700,108 | - | C1H8g21407 | CX8g052555 | LOC_Os08g33210 | - | - | Detail |
| C2H8g18997 | 8:17,734,806-17,737,546 | - | C1H8g10050 | CX8g053482 | LOC_Os08g33300 | Os08g0429800 | CYP735A3 | Detail |
| C2H8g00636 | 8:17,744,728-17,751,088 | - | C1H8g00422 | CX8g051393 | LOC_Os08g33320 | Os08g0430000 | - | Detail |
| C2H8g11628 | 8:17,760,236-17,761,197 | + | C1H8g30225 | CX8g051361 | LOC_Os08g33330 | Os08g0430100 | - | Detail |
| C2H8g05550 | 8:17,764,469-17,769,142 | + | C1H8g24772 | CX8g051217 | LOC_Os08g33340 | Os08g0430200 | - | Detail |
| C2H8g17605 | 8:17,769,934-17,770,206 | - | - | CX8g053045 | - | Os08g0486933 | - | Detail |
| C2H8g23742 | 8:17,771,883-17,774,641 | - | C1H8g17425 | - | LOC_Os08g33350 | Os08g0430300 | - | Detail |
| C2H8g13447 | 8:17,786,221-17,789,219 | - | C1H8g11194 | CX8g051246 | LOC_Os08g33370 | Os08g0430500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |