| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g13789 | 3:22,016,452-22,018,966 | - | C2H3g05535 | CX3g030510 | LOC_Os03g41460 | Os03g0610900 | SAPK10, OsSAPK10 | Detail |
| C1H3g22269 | 3:22,029,244-22,033,852 | + | C2H3g15741 | CX3g026107 | LOC_Os03g41510 | Os03g0611200 | - | Detail |
| C1H3g17986 | 3:22,035,539-22,038,425 | - | C2H3g25650 | CX3g025338 | LOC_Os03g41530 | Os03g0611700 | - | Detail |
| C1H3g17011 | 3:22,070,131-22,071,051 | + | C2H3g04855 | CX3g025821 | LOC_Os03g41600 | Os03g0612400 | - | Detail |
| C1H3g12958 | 3:22,078,042-22,082,492 | - | C2H3g09198 | CX3g031277 | LOC_Os03g41612 | Os03g0612600 | - | Detail |
| C1H3g29822 | 3:22,105,761-22,111,850 | + | C2H3g10005 | CX3g030220 | LOC_Os03g42010 | Os03g0616300 | - | Detail |
| C1H3g02131 | 3:22,112,841-22,118,431 | + | C2H3g25190 | CX3g027194 | LOC_Os03g42020 | Os03g0616400 | - | Detail |
| C1H3g04775 | 3:22,122,945-22,128,579 | - | C2H3g04640 | CX3g028407 | LOC_Os03g42040 | Os03g0616500 | - | Detail |
| C1H3g10684 | 3:22,134,390-22,149,984 | - | C2H3g04177 | CX3g025679 | LOC_Os03g42050 | Os03g0616700 | - | Detail |
| C1H3g02090 | 3:22,185,359-22,186,825 | - | C2H3g24758 | CX3g029365 | LOC_Os03g42070 | Os03g0617500 | - | Detail |
| C1H3g25739 | 3:22,218,359-22,222,460 | - | C2H3g20240 | CX3g028127 | LOC_Os03g42110 | Os03g0617900 | - | Detail |
| C1H3g17864 | 3:22,244,975-22,246,986 | - | C2H3g19029 | CX3g025773 | LOC_Os03g42130 | Os03g0618300 | - | Detail |
| C1H3g22177 | 3:22,250,794-22,254,930 | + | - | - | - | - | - | Detail |
| C1H3g03687 | 3:22,273,330-22,278,555 | + | C2H3g03302 | CX3g029634 | LOC_Os03g42220 | Os03g0619400 | - | Detail |
| C1H3g26153 | 3:22,280,379-22,283,088 | + | C2H3g27772 | CX3g026756 | LOC_Os03g42230 | Os03g0619600 | - | Detail |
| C1H3g06725 | 3:22,285,276-22,292,010 | + | C2H3g24221 | CX3g025711 | LOC_Os03g42240 | Os03g0619800 | - | Detail |
| C1H3g18743 | 3:22,296,247-22,298,712 | + | C2H3g00057 | CX3g025711 | LOC_Os03g42230 | Os03g0619850 | - | Detail |
| C1H3g14727 | 3:22,307,196-22,309,040 | + | C2H3g18118 | CX3g026756 | LOC_Os03g42280 | Os03g0620400 | - | Detail |
| C1H3g10562 | 3:22,316,290-22,317,279 | + | C2H3g09124 | CX3g026756 | LOC_Os03g42240 | Os03g0620500 | - | Detail |
| C1H3g27023 | 3:22,318,784-22,319,764 | + | C2H3g05492 | CX3g025711 | LOC_Os03g42290 | Os03g0620400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g09287 | 3:30,222,920-30,226,256 | + | C1H3g31065 | CX3g027455 | LOC_Os03g58070 | Os03g0794900 | - | Detail |
| C2H3g10350 | 3:30,226,916-30,232,292 | - | C1H3g14917 | CX3g025789 | LOC_Os03g58080 | Os03g0795000 | - | Detail |
| C2H3g14214 | 3:30,233,192-30,235,132 | - | C1H3g21726 | CX7g047050 | LOC_Os03g58090 | Os03g0795100 | - | Detail |
| C2H3g03262 | 3:30,245,918-30,247,592 | - | C1H3g19476 | CX3g026410 | LOC_Os03g58110 | Os03g0795300 | - | Detail |
| C2H3g27733 | 3:30,259,067-30,262,461 | + | C1H3g15891 | CX3g026673 | LOC_Os03g58130 | Os03g0795500 | - | Detail |
| C2H3g00892 | 3:30,262,622-30,262,816 | - | C1H3g05639 | CX3g029982 | LOC_Os03g58140 | Os03g0795600 | - | Detail |
| C2H3g03004 | 3:30,263,080-30,264,677 | - | C1H3g08848 | CX3g029982 | LOC_Os03g58140 | Os03g0795600 | - | Detail |
| C2H3g02014 | 3:30,266,840-30,269,177 | - | C1H3g16443 | CX3g025433 | LOC_Os03g58150 | Os03g0795800 | - | Detail |
| C2H3g19484 | 3:30,269,440-30,272,649 | + | C1H3g00668 | CX3g029604 | LOC_Os03g58160 | Os03g0795900 | HSFA2E, HSfA2e, OsHsfA2e, OsHsf-12, HSF12 | Detail |
| C2H3g13882 | 3:30,280,144-30,280,849 | + | C1H3g17982 | - | - | Os03g0796000 | - | Detail |
| C2H3g08936 | 3:30,283,988-30,285,708 | + | C1H3g06155 | CX3g029140 | LOC_Os03g58170 | Os03g0744600 | - | Detail |
| C2H3g19170 | 3:30,304,548-30,305,166 | - | C1H3g22799 | CX3g029920 | LOC_Os03g58180 | Os03g0796301 | - | Detail |
| C2H3g21611 | 3:30,305,852-30,307,169 | - | C1H3g12446 | CX3g028585 | LOC_Os03g58190 | Os03g0796400 | - | Detail |
| C2H3g18356 | 3:30,310,527-30,312,904 | - | C1H3g01827 | CX3g026109 | LOC_Os03g58204 | Os03g0796501 | - | Detail |
| C2H3g26421 | 3:30,322,906-30,323,582 | - | - | CX7g047542 | - | - | - | Detail |
| C2H3g24067 | 3:30,325,529-30,328,397 | + | C1H3g31311 | CX3g026507 | - | - | - | Detail |
| C2H3g06838 | 3:30,342,946-30,345,210 | + | C1H3g10470 | CX3g027699 | LOC_Os03g58230 | Os03g0796600 | OsDUF50605 | Detail |
| C2H3g07985 | 3:30,356,260-30,362,517 | + | C1H3g27596 | CX3g028795 | LOC_Os03g58240 | Os03g0796800 | - | Detail |
| C2H3g15466 | 3:30,362,875-30,367,218 | - | C1H3g15009 | CX3g028970 | LOC_Os03g58250 | Os03g0796900 | REB, OsZIP33, RISBZ2, OsbZIP33 | Detail |
| C2H3g10564 | 3:30,370,146-30,373,999 | - | C1H3g17969 | CX3g025677 | LOC_Os03g58260 | Os03g0797000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |