| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g03260 | 1:912,363-919,808 | - | C2H1g11248 | CX1g005069 | LOC_Os01g03020 | Os01g0120300 | - | Detail |
| C1H1g11508 | 1:920,249-922,765 | - | C2H1g00360 | CX1g001161 | LOC_Os01g03030 | Os01g0120400 | - | Detail |
| C1H1g03575 | 1:924,063-925,404 | - | C2H1g23693 | CX1g002228 | LOC_Os01g03040 | Os01g0120500 | - | Detail |
| C1H1g25620 | 1:926,529-928,682 | + | C2H1g04453 | CX1g000645 | LOC_Os01g03050 | Os01g0120600 | - | Detail |
| C1H1g21397 | 1:932,755-940,012 | - | C2H1g07428 | CX1g002673 | LOC_Os01g03070 | Os01g0120800 | - | Detail |
| C1H1g11884 | 1:944,374-947,490 | + | C2H1g24271 | CX1g003419 | LOC_Os01g03090 | Os01g0121100 | - | Detail |
| C1H1g21163 | 1:948,164-950,482 | - | C2H1g00075 | CX1g006351 | LOC_Os01g03100 | Os01g0121200 | - | Detail |
| C1H1g02205 | 1:958,485-963,423 | - | C2H1g03352 | CX1g000986 | LOC_Os01g03110 | Os01g0121300 | - | Detail |
| C1H1g30654 | 1:977,812-978,306 | - | C2H1g22579 | CX1g006139 | LOC_Os01g03130 | Os01g0121500 | - | Detail |
| C1H1g02007 | 1:984,886-985,311 | - | C2H1g21567 | CX1g003296 | LOC_Os01g03130 | Os01g0121600 | - | Detail |
| C1H1g03560 | 1:985,449-992,024 | - | C2H1g27556 | CX1g003396 | LOC_Os01g03144 | Os01g0121700 | - | Detail |
| C1H1g30771 | 1:994,207-997,876 | + | C2H1g21458 | CX1g005704 | LOC_Os01g03160 | Os01g0121800 | - | Detail |
| C1H1g24391 | 1:1,000,069-1,001,455 | + | C2H1g00690 | CX1g001540 | LOC_Os01g03170 | Os01g0121900 | - | Detail |
| C1H1g11317 | 1:1,002,756-1,004,166 | + | C2H1g13526 | CX1g002300 | LOC_Os01g03170 | Os01g0121950 | - | Detail |
| C1H1g01717 | 1:1,009,256-1,009,863 | - | - | - | - | - | - | Detail |
| C1H1g19600 | 1:1,013,804-1,014,904 | + | C2H1g11805 | CX1g005293 | LOC_Os01g03190 | Os01g0122200 | - | Detail |
| C1H1g20214 | 1:1,016,310-1,017,271 | + | C2H1g11417 | CX1g005293 | LOC_Os01g03210 | Os01g0122701 | - | Detail |
| C1H1g21487 | 1:1,026,445-1,028,717 | - | C2H1g13088 | CX1g000755 | LOC_Os01g03260 | Os01g0119500 | - | Detail |
| C1H1g18595 | 1:1,036,871-1,038,039 | + | C2H1g20613 | CX1g001540 | LOC_Os01g03270 | Os01g0123700 | - | Detail |
| C1H1g10726 | 1:1,048,394-1,049,381 | - | C2H1g02744 | CX1g001540 | LOC_Os01g03290 | Os01g0123700 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g20320 | 4:4,580,684-4,595,119 | - | C1H4g19750 | CX4g036116 | - | Os04g0177600 | - | Detail |
| C2H4g06763 | 4:4,603,488-4,609,315 | + | C1H4g08248 | CX4g034737 | LOC_Os04g10060 | Os04g0179700 | OsKS4, OsKSL4, OsDTS2, OsKSL1 | Detail |
| C2H4g26362 | 4:4,610,311-4,613,778 | + | - | - | - | - | - | Detail |
| C2H4g10076 | 4:4,631,228-4,632,183 | + | C1H4g01524 | CX4g035289 | LOC_Os04g10010 | Os04g0179200 | - | Detail |
| C2H4g09020 | 4:4,636,815-4,638,002 | + | C1H4g30336 | CX4g033846 | LOC_Os04g10000 | Os04g0179100 | - | Detail |
| C2H4g20823 | 4:4,651,384-4,656,607 | - | C1H4g10301 | CX4g033652 | LOC_Os04g11850 | Os04g0206200 | - | Detail |
| C2H4g20465 | 4:4,684,456-4,684,847 | - | C1H3g15946 | CX4g035261 | - | - | - | Detail |
| C2H4g09237 | 4:4,691,216-4,693,185 | + | C1H4g28574 | CX4g036126 | LOC_Os04g09920 | Os04g0178400 | CYP99A3 | Detail |
| C2H4g23937 | 4:4,702,491-4,703,137 | + | - | CX4g036600 | LOC_Os10g11240 | Os08g0271600 | - | Detail |
| C2H4g23853 | 4:4,705,215-4,709,270 | - | C1H4g09839 | CX4g032774 | LOC_Os04g09900 | Os04g0178300 | OsCPS4, Os-CPS4, OsCyc1, OsCPSsyn | Detail |
| C2H4g26728 | 4:4,710,898-4,711,756 | - | C1H4g12052 | CX4g032774 | LOC_Os04g09900 | Os04g0611800 | OsKSL2 | Detail |
| C2H4g06078 | 4:4,732,665-4,734,362 | + | C1H4g04065 | CX4g034919 | LOC_Os04g10160 | Os04g0180400 | - | Detail |
| C2H4g21850 | 4:4,759,078-4,761,519 | - | C1H4g03949 | - | LOC_Os04g10210 | - | - | Detail |
| C2H4g14385 | 4:4,767,542-4,770,581 | - | C1H4g10325 | CX4g036149 | LOC_Os04g10240 | Os04g0181100 | - | Detail |
| C2H4g14846 | 4:4,779,345-4,782,119 | - | C1H4g30056 | CX4g035099 | LOC_Os04g10260 | Os04g0181300 | - | Detail |
| C2H4g02690 | 4:4,784,623-4,786,141 | + | C1H4g22965 | CX4g035182 | LOC_Os04g10350 | Os04g0182200 | - | Detail |
| C2H4g06301 | 4:4,797,896-4,798,687 | + | - | - | - | - | - | Detail |
| C2H4g27360 | 4:4,806,675-4,808,996 | + | C1H4g24802 | CX4g035182 | LOC_Os04g10350 | Os04g0182200 | - | Detail |
| C2H4g25006 | 4:4,828,000-4,849,200 | + | C1H4g12559 | CX4g032156 | LOC_Os04g10380 | Os04g0182650 | - | Detail |
| C2H4g08700 | 4:4,856,672-4,859,865 | - | C1H4g07822 | CX4g034981 | LOC_Os04g10400 | Os04g0182800 | ETFβ | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |