| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g18372 | 3:19,110,823-19,111,940 | - | C2H3g08461 | CX3g026625 | LOC_Os03g36439 | Os03g0562200 | - | Detail |
| C1H3g09057 | 3:19,122,970-19,123,353 | - | C2H3g19324 | CX3g025527 | - | Os03g0562200 | - | Detail |
| C1H3g31570 | 3:19,192,838-19,196,906 | + | C2H3g18751 | CX3g030881 | LOC_Os03g36530 | Os03g0563100 | - | Detail |
| C1H3g17857 | 3:19,201,151-19,202,787 | - | C2H3g06195 | CX3g027657 | LOC_Os03g36540 | Os03g0563300 | ELL, OsCHLI | Detail |
| C1H3g29929 | 3:19,216,738-19,219,455 | + | C2H3g17553 | CX3g025994 | LOC_Os03g36560 | Os03g0563600 | - | Detail |
| C1H3g19117 | 3:19,220,085-19,220,581 | + | C2H3g01598 | CX3g025994 | LOC_Os03g36560 | Os03g0563600 | - | Detail |
| C1H3g14152 | 3:19,231,765-19,233,115 | - | C2H2g09097 | CX3g030156 | - | - | - | Detail |
| C1H3g27327 | 3:19,255,602-19,261,239 | + | C2H3g26291 | CX3g025101 | LOC_Os03g36630 | Os03g0564200 | - | Detail |
| C1H3g06313 | 3:19,267,141-19,267,881 | - | C2H3g01936 | CX3g026822 | LOC_Os03g36650 | Os03g0564600 | - | Detail |
| C1H3g28639 | 3:19,295,767-19,296,762 | - | C2H3g24254 | CX3g030746 | LOC_Os03g36730 | Os03g0565100 | - | Detail |
| C1H3g02915 | 3:19,306,387-19,313,640 | + | C2H3g16341 | CX3g030180 | LOC_Os03g36750 | Os03g0565200 | - | Detail |
| C1H3g22618 | 3:19,316,397-19,320,946 | + | C2H3g09325 | CX3g025334 | LOC_Os03g36760 | Os03g0565300 | - | Detail |
| C1H3g29496 | 3:19,329,990-19,344,671 | + | C2H3g16767 | CX3g030739 | LOC_Os03g36780 | Os03g0565500 | - | Detail |
| C1H3g13363 | 3:19,348,084-19,353,681 | - | C2H3g12114 | CX3g029595 | LOC_Os03g36790 | Os03g0565600 | - | Detail |
| C1H3g15819 | 3:19,360,543-19,361,495 | + | - | - | - | - | - | Detail |
| C1H3g22145 | 3:19,363,091-19,365,899 | - | C2H3g20304 | CX3g027738 | LOC_Os03g36830 | Os03g0565900 | - | Detail |
| C1H3g00076 | 3:19,392,001-19,392,820 | + | - | CX3g026652 | - | - | - | Detail |
| C1H3g03992 | 3:19,394,952-19,398,700 | - | C2H3g02382 | CX3g027468 | LOC_Os03g36900 | Os03g0566500 | - | Detail |
| C1H3g30925 | 3:19,403,215-19,405,542 | + | C2H3g13499 | CX3g026657 | LOC_Os03g36910 | Os03g0566600 | - | Detail |
| C1H3g18058 | 3:19,406,273-19,409,543 | - | C2H3g26454 | CX3g025200 | LOC_Os03g36920 | Os03g0566700 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H7g11450 | 7:7,124,958-7,125,581 | - | C1H7g21224 | CX7g048720 | LOC_Os07g14660 | Os07g0250501 | - | Detail |
| C2H7g23778 | 7:7,137,781-7,138,464 | - | C1H7g21292 | CX7g048720 | LOC_Os07g14700 | Os07g0250900 | - | Detail |
| C2H7g28203 | 7:7,149,078-7,149,719 | - | C1H7g21224 | CX7g048720 | LOC_Os07g14740 | Os07g0250501 | - | Detail |
| C2H7g28553 | 7:7,186,019-7,186,360 | - | - | CX7g048902 | LOC_Os07g14750 | Os07g0251301 | - | Detail |
| C2H7g15996 | 7:7,200,306-7,203,510 | + | C1H7g18810 | CX7g048268 | LOC_Os07g14820 | Os07g0251900 | - | Detail |
| C2H7g05679 | 7:7,207,094-7,212,290 | + | C1H7g10746 | CX7g046435 | LOC_Os07g14830 | Os07g0252000 | - | Detail |
| C2H7g17134 | 7:7,223,715-7,229,463 | + | C1H7g26817 | CX7g049667 | LOC_Os07g14850 | Os07g0252400 | - | Detail |
| C2H7g23750 | 7:7,246,226-7,246,788 | + | C1H7g10089 | CX7g048231 | LOC_Os07g14890 | Os07g0252800 | - | Detail |
| C2H7g19402 | 7:7,250,072-7,252,482 | + | C1H7g26508 | CX7g050168 | LOC_Os07g14910 | Os07g0253000 | - | Detail |
| C2H7g05963 | 7:7,264,734-7,267,208 | + | C1H7g01742 | CX7g049155 | LOC_Os07g15100 | Os11g0105750 | - | Detail |
| C2H7g08804 | 7:7,268,652-7,270,616 | + | C1H7g17603 | - | - | - | - | Detail |
| C2H7g14446 | 7:7,371,109-7,372,779 | - | C1H7g31283 | CX7g047859 | LOC_Os07g15230 | Os07g0255900 | - | Detail |
| C2H7g28428 | 7:7,384,135-7,386,590 | + | C1H7g31340 | CX7g047486 | LOC_Os07g15270 | Os07g0256200 | - | Detail |
| C2H7g03084 | 7:7,387,642-7,390,675 | - | C1H7g04567 | CX7g046073 | LOC_Os07g15280 | Os07g0256300 | - | Detail |
| C2H7g00027 | 7:7,393,258-7,394,158 | + | C1H7g10057 | - | - | - | - | Detail |
| C2H7g14105 | 7:7,397,943-7,399,796 | + | C1H7g05073 | CX7g049409 | LOC_Os07g15320 | Os07g0256700 | - | Detail |
| C2H7g16317 | 7:7,428,225-7,435,578 | - | C1H7g15620 | CX7g047655 | LOC_Os07g15370 | Os07g0257200 | NRAMP5, OsNRAMP5, OsNramp5 | Detail |
| C2H7g08787 | 7:7,441,684-7,444,000 | - | - | - | - | - | - | Detail |
| C2H7g21797 | 7:7,460,714-7,465,665 | + | C1H7g04435 | CX7g050324 | LOC_Os07g15460 | Os07g0258400 | NRAMP1, OsNramp1, OsNRAMP1 | Detail |
| C2H7g24866 | 7:7,471,502-7,474,421 | + | C1H7g23800 | CX7g047521 | LOC_Os07g15490 | Os07g0258700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |