| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g27459 | 3:17,643,889-17,650,349 | - | C2H3g02896 | CX3g025874 | LOC_Os03g33590 | Os03g0448700 | - | Detail |
| C1H3g11876 | 3:17,701,003-17,705,075 | + | C2H3g09597 | CX3g025469 | LOC_Os03g33650 | Os03g0449200 | SHL4, SHO2, SHO2/SHL4, OsAGO7 | Detail |
| C1H3g10349 | 3:17,770,312-17,773,861 | - | C2H3g06387 | CX3g028866 | LOC_Os03g33012 | Os03g0444900 | OsWRKY33, OsWRKY81 | Detail |
| C1H3g26549 | 3:17,780,356-17,780,712 | - | C2H3g24450 | - | - | Os03g0444900 | OsWRKY33, OsWRKY81 | Detail |
| C1H3g16808 | 3:17,907,322-17,911,447 | - | C2H3g04259 | CX3g031079 | LOC_Os03g34040 | Os03g0452300 | - | Detail |
| C1H3g08800 | 3:17,973,712-17,976,997 | + | C2H3g20904 | CX3g026859 | LOC_Os03g34280 | Os03g0453800 | - | Detail |
| C1H3g06458 | 3:17,981,056-17,981,551 | + | C2H3g03414 | CX3g031021 | LOC_Os08g09860 | Os03g0786100 | - | Detail |
| C1H3g13672 | 3:17,981,611-17,986,020 | + | C2H3g06895 | CX3g026131 | - | Os03g0786100 | - | Detail |
| C1H3g14005 | 3:17,990,783-17,997,819 | - | C2H3g12265 | CX3g028089 | LOC_Os03g34300 | Os03g0454100 | - | Detail |
| C1H3g30334 | 3:18,065,445-18,075,548 | + | C2H3g24060 | CX3g029528 | - | Os03g0678400 | - | Detail |
| C1H3g23806 | 3:18,141,191-18,144,257 | + | C2H3g17975 | CX3g026576 | - | Os03g0759000 | - | Detail |
| C1H3g18625 | 3:18,369,083-18,384,635 | - | C2H3g10346 | CX3g027364 | LOC_Os03g35340 | Os03g0554900 | - | Detail |
| C1H3g29658 | 3:18,400,674-18,401,960 | - | C2H3g04971 | CX3g026045 | LOC_Os03g35370 | - | - | Detail |
| C1H3g29570 | 3:18,411,452-18,413,140 | - | C2H3g05979 | - | LOC_Os03g35454 | - | - | Detail |
| C1H3g05847 | 3:18,463,594-18,467,637 | + | C2H3g12208 | CX3g030899 | - | - | - | Detail |
| C1H3g05109 | 3:18,510,106-18,514,463 | + | C2H3g23939 | CX3g026628 | LOC_Os03g35600 | Os03g0556600 | SDRLK-20 | Detail |
| C1H3g10727 | 3:18,577,469-18,581,510 | + | C2H3g12208 | CX3g030899 | - | - | - | Detail |
| C1H3g15595 | 3:18,624,099-18,628,160 | + | C2H3g23939 | CX3g026628 | LOC_Os03g35600 | Os03g0556600 | SDRLK-20 | Detail |
| C1H3g27683 | 3:18,689,653-18,691,247 | - | C2H3g20317 | - | LOC_Os03g35620 | - | - | Detail |
| C1H3g27677 | 3:18,921,960-18,924,576 | - | - | - | - | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H10g03620 | 10:15,293,710-15,300,678 | - | C1H10g01752 | CX10g010642 | LOC_Os10g31856 | Os10g0456900 | - | Detail |
| C2H10g09169 | 10:15,322,756-15,326,210 | - | C1H10g17895 | CX10g010642 | - | Os10g0456900 | - | Detail |
| C2H10g25978 | 10:15,328,484-15,334,185 | + | C1H10g28142 | CX10g009936 | LOC_Os10g31900 | Os10g0457000 | - | Detail |
| C2H10g24061 | 10:15,334,646-15,340,828 | - | C1H10g02421 | CX10g008983 | LOC_Os10g31910 | Os10g0457200 | DEL1 | Detail |
| C2H10g11587 | 10:15,346,206-15,347,999 | + | C1H10g09269 | CX10g010532 | LOC_Os10g31930 | Os10g0457400 | - | Detail |
| C2H10g13883 | 10:15,348,492-15,351,024 | - | C1H10g03592 | CX10g009774 | LOC_Os10g31940 | Os10g0457500 | - | Detail |
| C2H10g12371 | 10:15,355,795-15,360,120 | + | C1H10g24214 | CX10g008016 | LOC_Os10g31950 | Os10g0457600 | - | Detail |
| C2H10g02206 | 10:15,365,324-15,377,908 | + | C1H10g03063 | CX10g008261 | LOC_Os10g31970 | Os10g0457700 | OsCHR717, CHR717 | Detail |
| C2H10g01863 | 10:15,389,270-15,395,532 | + | C1H10g15449 | CX10g010754 | LOC_Os10g32060 | Os10g0458700 | - | Detail |
| C2H10g14200 | 10:15,396,343-15,397,742 | - | C1H10g28744 | - | LOC_Os10g32070 | Os10g0557600 | OsGATA7 | Detail |
| C2H10g14384 | 10:15,401,300-15,402,832 | - | C1H10g22945 | CX10g008914 | LOC_Os10g32080 | Os10g0458900 | - | Detail |
| C2H10g10019 | 10:15,407,877-15,409,382 | - | C1H10g22945 | CX10g008084 | LOC_Os10g32110 | Os10g0459300 | - | Detail |
| C2H10g06860 | 10:15,422,996-15,424,768 | + | C1H10g22945 | CX10g010119 | LOC_Os10g32160 | Os10g0459600 | - | Detail |
| C2H10g24376 | 10:15,426,540-15,426,740 | + | - | CX10g009452 | - | - | - | Detail |
| C2H10g00819 | 10:15,428,576-15,430,444 | - | C1H10g22945 | CX10g007662 | LOC_Os10g32170 | Os10g0459700 | - | Detail |
| C2H10g20849 | 10:15,433,795-15,436,229 | + | C1H10g16024 | CX10g010725 | LOC_Os10g32470 | Os10g0462300 | - | Detail |
| C2H10g04703 | 10:15,440,884-15,443,880 | + | C1H10g28930 | CX8g052327 | LOC_Os10g32400 | Os10g0461400 | - | Detail |
| C2H10g15082 | 10:15,448,235-15,452,535 | + | C1H10g19996 | CX10g009991 | LOC_Os10g32300 | Os10g0460900 | - | Detail |
| C2H10g22790 | 10:15,454,516-15,462,907 | + | C1H10g26551 | CX10g009991 | LOC_Os10g32540 | Os10g0462800 | WSL3, OspTAC3, pTAC3 | Detail |
| C2H10g17683 | 10:15,463,393-15,468,708 | + | C1H10g16202 | CX10g009745 | LOC_Os10g32550 | Os10g0462900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |