| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g02815 | 3:16,130,550-16,134,927 | + | C2H3g06341 | CX3g030906 | LOC_Os03g31000 | Os03g0424000 | - | Detail |
| C1H3g00527 | 3:16,136,354-16,137,842 | + | C2H3g06341 | CX3g030906 | LOC_Os03g31000 | Os03g0424200 | - | Detail |
| C1H3g12825 | 3:16,139,570-16,144,126 | + | C2H3g24636 | CX3g027986 | LOC_Os03g31010 | Os03g0423800 | - | Detail |
| C1H3g17862 | 3:16,147,826-16,154,065 | - | C2H3g06341 | CX3g028309 | LOC_Os03g31044 | Os03g0424000 | - | Detail |
| C1H3g03536 | 3:16,204,969-16,205,398 | + | C2H3g29625 | CX3g028983 | - | Os03g0424300 | - | Detail |
| C1H3g03549 | 3:16,206,760-16,213,888 | + | C2H3g29941 | CX3g026843 | LOC_Os03g31090 | Os03g0424800 | - | Detail |
| C1H3g27057 | 3:16,211,973-16,217,082 | - | - | CX3g028435 | LOC_Os03g32190 | Os03g0424600 | - | Detail |
| C1H3g15507 | 3:16,228,835-16,230,254 | + | C2H3g29941 | CX9g057750 | LOC_Os03g31090 | Os03g0424500 | - | Detail |
| C1H3g06288 | 3:16,233,844-16,237,189 | + | C2H3g02070 | CX3g026843 | LOC_Os03g31150 | Os03g0425000 | - | Detail |
| C1H3g23569 | 3:16,237,760-16,240,886 | - | C2H3g13373 | CX3g026358 | LOC_Os03g31170 | Os03g0425200 | - | Detail |
| C1H3g07104 | 3:16,247,215-16,253,043 | + | C2H3g29562 | CX3g025115 | LOC_Os03g31180 | Os03g0425300 | - | Detail |
| C1H3g07332 | 3:16,258,508-16,260,378 | + | C2H3g24938 | CX3g030946 | LOC_Os03g31210 | Os03g0425600 | - | Detail |
| C1H3g20426 | 3:16,272,767-16,276,427 | + | C2H3g12524 | CX3g025387 | LOC_Os03g31230 | Os03g0425800 | - | Detail |
| C1H3g22127 | 3:16,295,382-16,299,157 | - | C2H3g01389 | CX3g029401 | LOC_Os03g31260 | Os03g0426300 | - | Detail |
| C1H3g16780 | 3:16,315,519-16,318,741 | + | C2H3g18833 | CX3g025661 | LOC_Os03g31290 | Os03g0426800 | - | Detail |
| C1H3g17321 | 3:16,328,669-16,335,694 | + | C2H3g26583 | CX3g031265 | LOC_Os03g31300 | Os03g0426900 | - | Detail |
| C1H3g18318 | 3:16,362,578-16,364,335 | + | C2H3g22373 | CX3g030459 | LOC_Os03g31360 | Os03g0427300 | - | Detail |
| C1H3g10283 | 3:16,369,867-16,376,963 | + | C2H3g13790 | CX3g031010 | LOC_Os03g31400 | Os03g0427900 | - | Detail |
| C1H3g31158 | 3:16,381,111-16,385,850 | - | C2H3g18509 | CX3g026162 | LOC_Os03g31430 | Os03g0428200 | - | Detail |
| C1H3g02780 | 3:16,442,818-16,445,737 | + | C2H3g05528 | CX3g027331 | LOC_Os03g31490 | Os03g0428800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H7g27112 | 7:354,610-360,113 | + | C1H7g24674 | CX7g048990 | LOC_Os07g01730 | Os07g0108000 | - | Detail |
| C2H7g21594 | 7:362,457-367,191 | - | C1H7g02419 | CX7g050371 | LOC_Os07g01750 | Os07g0108200 | - | Detail |
| C2H7g09384 | 7:368,389-379,570 | - | C1H7g29096 | CX7g048284 | LOC_Os07g01780 | Os07g0108500 | - | Detail |
| C2H7g12262 | 7:381,696-382,748 | + | C1H7g00019 | CX7g049487 | LOC_Os07g01800 | Os07g0480900 | - | Detail |
| C2H7g02864 | 7:384,102-385,184 | + | - | CX7g047017 | LOC_Os07g01810 | Os07g0108800 | TPKB, TPKb, OsTPKb | Detail |
| C2H7g15497 | 7:388,364-394,262 | - | C1H7g22403 | CX7g050402 | LOC_Os07g01820 | Os07g0108900 | DEP, FDRMADS3, MADS15, OsMADS15, RAP1A, RMADS215 | Detail |
| C2H7g24150 | 7:414,910-415,188 | - | - | - | - | - | - | Detail |
| C2H7g09456 | 7:433,679-438,901 | + | C1H7g25065 | CX7g047346 | LOC_Os07g01850 | Os07g0109300 | - | Detail |
| C2H7g13268 | 7:443,504-449,354 | + | C1H7g30461 | CX7g048897 | LOC_Os07g01860 | Os07g0109400 | SLG7-L2 | Detail |
| C2H7g26360 | 7:451,368-452,814 | - | C1H7g15867 | CX7g046958 | LOC_Os07g01870 | Os07g0109500 | - | Detail |
| C2H7g13917 | 7:453,565-461,059 | - | C1H7g16403 | CX7g047000 | LOC_Os07g01880 | Os07g0109600 | - | Detail |
| C2H7g09342 | 7:464,703-466,271 | + | C1H7g00789 | CX7g048348 | LOC_Os07g01900 | Os07g0109800 | - | Detail |
| C2H7g02867 | 7:468,495-469,353 | + | C1H7g09861 | CX7g050020 | LOC_Os07g01904 | Os07g0110000 | - | Detail |
| C2H7g09439 | 7:470,613-473,069 | - | C1H7g16577 | CX7g049723 | LOC_Os07g01910 | Os07g0110100 | - | Detail |
| C2H7g20137 | 7:475,652-477,723 | - | C1H7g11495 | CX7g048687 | LOC_Os07g01920 | Os07g0110200 | - | Detail |
| C2H7g20223 | 7:479,113-481,778 | + | C1H7g12390 | CX7g046426 | LOC_Os07g01930 | Os07g0110300 | - | Detail |
| C2H7g12862 | 7:483,572-498,672 | + | C1H7g15382 | CX7g046464 | LOC_Os07g01940 | Os07g0110400 | - | Detail |
| C2H7g29844 | 7:499,809-501,203 | + | C1H7g08712 | CX7g046464 | LOC_Os03g55070 | Os03g0757900 | - | Detail |
| C2H7g16520 | 7:502,079-506,255 | - | C1H7g17431 | CX7g048856 | LOC_Os07g02060 | Os07g0111400 | OsWRKY29 | Detail |
| C2H7g17241 | 7:523,524-527,621 | + | C1H7g10987 | CX7g047675 | LOC_Os07g02090 | Os07g0111600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |