| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g18690 | 3:15,749,039-15,756,065 | + | C2H3g09323 | CX3g029905 | LOC_Os03g28270 | Os03g0725400 | - | Detail |
| C1H3g24441 | 3:15,774,902-15,776,551 | - | C2H3g26870 | CX3g026161 | LOC_Os03g30420 | Os03g0417700 | GL3.2 | Detail |
| C1H3g26776 | 3:15,786,300-15,788,640 | - | C2H3g05806 | CX3g030533 | LOC_Os03g30430 | Os03g0417800 | - | Detail |
| C1H3g22117 | 3:15,803,095-15,814,901 | - | C2H3g00213 | CX3g028562 | LOC_Os03g30460 | Os03g0417900 | - | Detail |
| C1H3g24326 | 3:15,850,983-15,855,681 | + | C2H3g11020 | CX3g030496 | LOC_Os03g30530 | Os03g0418700 | - | Detail |
| C1H3g09665 | 3:15,868,128-15,872,414 | + | C2H3g12370 | CX3g029078 | LOC_Os03g30550 | Os03g0418800 | - | Detail |
| C1H3g06989 | 3:15,878,930-15,882,303 | + | C2H3g18691 | CX3g028098 | LOC_Os03g30570 | Os03g0419100 | - | Detail |
| C1H3g12867 | 3:15,933,055-15,933,600 | + | C2H3g24235 | CX3g025925 | LOC_Os03g30620 | Os03g0419700 | - | Detail |
| C1H3g04444 | 3:15,940,359-15,945,581 | - | C2H3g01931 | CX3g030573 | LOC_Os03g30740 | Os03g0421000 | - | Detail |
| C1H3g30737 | 3:15,961,280-15,961,595 | - | - | - | - | - | - | Detail |
| C1H3g15668 | 3:15,969,138-15,970,277 | - | C2H3g23509 | CX3g027425 | LOC_Os03g31560 | - | - | Detail |
| C1H3g16102 | 3:15,971,664-15,974,294 | - | C2H3g27833 | CX3g030856 | LOC_Os12g43000 | - | - | Detail |
| C1H3g12239 | 3:16,014,473-16,020,858 | - | C2H3g16480 | CX3g031361 | LOC_Os03g30790 | Os03g0421400 | - | Detail |
| C1H3g04388 | 3:16,023,173-16,023,544 | + | C2H3g11452 | CX3g026632 | LOC_Os03g30800 | Os03g0421700 | - | Detail |
| C1H3g01834 | 3:16,026,215-16,026,693 | + | C2H3g19512 | CX3g028926 | - | Os03g0829000 | - | Detail |
| C1H3g24665 | 3:16,030,747-16,032,584 | - | C2H3g13281 | CX3g030283 | LOC_Os03g30830 | Os03g0421800 | - | Detail |
| C1H3g05010 | 3:16,069,227-16,069,439 | + | - | - | - | - | - | Detail |
| C1H3g25671 | 3:16,070,922-16,073,426 | + | C2H3g30654 | CX3g029866 | LOC_Os03g30890 | Os03g0422800 | SDRLP-8 | Detail |
| C1H3g21142 | 3:16,086,162-16,092,212 | - | C2H3g09391 | CX3g027808 | LOC_Os03g30934 | Os03g0423200 | - | Detail |
| C1H3g28137 | 3:16,093,672-16,095,012 | - | C2H3g11099 | CX3g030134 | LOC_Os03g30950 | Os03g0423300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H7g10462 | 7:14,419,214-14,420,446 | + | C1H7g00019 | CX7g048970 | LOC_Os07g29760 | Os07g0480900 | - | Detail |
| C2H7g05929 | 7:14,423,723-14,430,878 | + | C1H7g31797 | - | LOC_Os07g29770 | Os07g0481000 | - | Detail |
| C2H7g12520 | 7:14,429,832-14,432,185 | - | C1H7g17042 | CX7g047934 | LOC_Os07g29780 | Os07g0481100 | - | Detail |
| C2H7g04918 | 7:14,436,867-14,437,607 | + | - | - | - | - | - | Detail |
| C2H7g17914 | 7:14,439,990-14,442,145 | + | C1H7g08825 | CX7g047784 | LOC_Os07g29794 | Os07g0481200 | - | Detail |
| C2H7g08081 | 7:14,447,571-14,451,581 | + | C1H7g01187 | CX7g048988 | LOC_Os07g29810 | Os07g0481300 | - | Detail |
| C2H7g20657 | 7:14,453,563-14,458,844 | - | C1H7g17999 | CX7g048988 | LOC_Os07g29820 | Os07g0481400 | - | Detail |
| C2H7g01767 | 7:14,466,272-14,467,195 | + | C1H7g20643 | CX7g049622 | LOC_Os07g31070 | Os07g0482433 | - | Detail |
| C2H7g00792 | 7:14,471,438-14,473,257 | + | C1H7g12460 | CX7g046236 | LOC_Os07g29830 | Os07g0492966 | - | Detail |
| C2H7g03865 | 7:14,484,618-14,487,304 | - | C1H7g25439 | CX7g046285 | LOC_Os07g29960 | Os07g0482900 | - | Detail |
| C2H7g23671 | 7:14,508,415-14,508,807 | + | - | - | LOC_Os07g34450 | - | - | Detail |
| C2H7g21827 | 7:14,512,350-14,513,451 | + | C1H7g27243 | - | - | Os07g0483400 | - | Detail |
| C2H7g12658 | 7:14,515,686-14,518,721 | - | C1H7g00758 | CX7g046925 | LOC_Os07g30020 | Os07g0483500 | - | Detail |
| C2H7g24842 | 7:14,539,940-14,541,355 | + | C1H7g20920 | CX7g049843 | LOC_Os07g30090 | Os07g0484200 | - | Detail |
| C2H7g15400 | 7:14,543,585-14,555,548 | - | C1H7g24417 | CX7g047443 | LOC_Os07g30100 | Os07g0484300 | - | Detail |
| C2H7g08443 | 7:14,579,236-14,582,952 | + | C1H7g17450 | CX7g046292 | LOC_Os07g30110 | Os07g0484500 | - | Detail |
| C2H7g28168 | 7:14,585,925-14,593,326 | - | C1H7g29847 | - | LOC_Os07g30150 | Os07g0484800 | - | Detail |
| C2H7g17517 | 7:14,598,415-14,599,725 | - | C1H7g20780 | - | LOC_Os07g30150 | Os07g0484800 | - | Detail |
| C2H7g13834 | 7:14,615,460-14,617,479 | + | C1H7g14423 | CX7g047351 | LOC_Os07g30160 | Os07g0485000 | - | Detail |
| C2H7g08877 | 7:14,617,734-14,620,873 | - | C1H7g26216 | CX7g048078 | LOC_Os07g30170 | Os07g0485100 | Osb-UP, Osbeta-UP, Osβ-UP | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |