| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g10441 | 1:16,089,752-16,095,971 | + | C2H1g29027 | CX1g000284 | LOC_Os01g31360 | Os01g0498200 | - | Detail |
| C1H1g08067 | 1:16,131,645-16,131,908 | - | C2H1g10406 | CX1g003239 | LOC_Os02g53860 | Os01g0702300 | - | Detail |
| C1H1g19933 | 1:16,131,950-16,132,486 | - | - | CX1g006103 | - | - | - | Detail |
| C1H1g02507 | 1:16,186,136-16,194,080 | - | C2H1g27470 | CX1g006952 | LOC_Os01g31470 | Os01g0499300 | - | Detail |
| C1H1g30690 | 1:16,202,153-16,206,030 | - | - | - | LOC_Os01g31494 | - | - | Detail |
| C1H1g06507 | 1:16,232,177-16,234,893 | + | - | CX1g003470 | LOC_Os10g12140 | - | - | Detail |
| C1H1g29343 | 1:16,254,135-16,262,299 | - | C2H1g12094 | CX1g003784 | LOC_Os01g31580 | Os01g0500500 | - | Detail |
| C1H1g22299 | 1:16,262,449-16,263,455 | + | - | - | - | - | - | Detail |
| C1H1g00827 | 1:16,265,064-16,266,593 | - | - | - | - | - | - | Detail |
| C1H1g25673 | 1:16,280,410-16,285,559 | + | C2H1g04216 | CX1g001244 | - | Os01g0531200 | - | Detail |
| C1H1g15828 | 1:16,286,887-16,287,519 | + | C2H1g24200 | - | - | - | - | Detail |
| C1H1g26169 | 1:16,291,534-16,296,030 | + | - | CX1g006932 | LOC_Os01g31610 | Os01g0500900 | - | Detail |
| C1H1g02546 | 1:16,298,476-16,302,520 | - | C2H1g16802 | CX1g004477 | LOC_Os01g31629 | Os01g0501000 | - | Detail |
| C1H1g29880 | 1:16,303,654-16,304,694 | - | C2H1g16802 | CX1g004477 | LOC_Os01g31629 | Os01g0501000 | - | Detail |
| C1H1g24088 | 1:16,312,907-16,313,210 | - | C2H1g06157 | - | LOC_Os01g31670 | - | - | Detail |
| C1H1g12098 | 1:16,333,742-16,338,873 | - | C2H1g01470 | CX1g007019 | LOC_Os01g31680 | Os01g0501700 | OsTATC | Detail |
| C1H1g01980 | 1:16,342,887-16,344,316 | + | C2H1g01635 | CX1g000224 | LOC_Os01g31690 | Os01g0501800 | - | Detail |
| C1H1g18830 | 1:16,365,340-16,372,622 | + | C2H1g04118 | CX1g003789 | LOC_Os01g31760 | Os01g0502300 | - | Detail |
| C1H1g06929 | 1:16,399,018-16,408,581 | + | C2H1g07307 | CX1g004837 | LOC_Os01g31770 | Os01g0502400 | - | Detail |
| C1H1g23293 | 1:16,434,330-16,436,518 | - | C2H1g27591 | CX1g002538 | LOC_Os01g31810 | Os01g0502800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g23287 | 9:18,074,497-18,078,205 | - | C1H9g18054 | CX9g058088 | LOC_Os09g37012 | Os09g0542100 | - | Detail |
| C2H9g00368 | 9:18,082,387-18,084,718 | - | C1H9g17541 | CX9g055142 | LOC_Os09g37020 | Os09g0542200 | - | Detail |
| C2H9g15798 | 9:18,092,302-18,095,972 | + | C1H9g09227 | CX9g057132 | LOC_Os09g37040 | Os09g0542500 | - | Detail |
| C2H9g05399 | 9:18,096,779-18,098,237 | - | C1H9g10374 | CX9g057153 | LOC_Os09g37050 | Os09g0542600 | - | Detail |
| C2H9g07462 | 9:18,101,890-18,104,578 | - | C1H9g10542 | CX9g057571 | LOC_Os09g37060 | Os09g0542700 | - | Detail |
| C2H9g24102 | 9:18,108,027-18,109,667 | - | C1H9g20729 | CX9g054989 | LOC_Os09g37070 | Os09g0542800 | - | Detail |
| C2H9g30539 | 9:18,128,798-18,134,856 | + | C1H9g02114 | CX9g055681 | LOC_Os09g37100 | Os09g0543100 | - | Detail |
| C2H9g20419 | 9:18,163,287-18,164,594 | + | C1H9g14882 | CX9g056310 | LOC_Os09g37180 | Os09g0543900 | - | Detail |
| C2H9g04352 | 9:18,174,377-18,175,741 | + | C1H9g22634 | CX9g056534 | LOC_Os09g37200 | Os09g0544000 | OsPHT4 | Detail |
| C2H9g00928 | 9:18,186,499-18,193,710 | + | C1H9g07690 | CX9g057415 | LOC_Os09g37230 | Os09g0544300 | - | Detail |
| C2H9g30661 | 9:18,194,984-18,216,082 | + | C1H9g17505 | CX9g057924 | LOC_Os09g37240 | Os09g0544400 | - | Detail |
| C2H9g00491 | 9:18,216,801-18,218,600 | - | C1H9g29018 | CX9g057891 | LOC_Os09g37250 | - | - | Detail |
| C2H9g14558 | 9:18,222,568-18,223,462 | - | C1H9g19143 | CX9g057635 | LOC_Os09g37260 | Os09g0544700 | - | Detail |
| C2H9g28839 | 9:18,223,898-18,227,681 | - | C1H9g28030 | CX9g057831 | LOC_Os09g37270 | Os09g0544800 | Os RopGEF7, OsRopGEF7, OsRacGEF2 | Detail |
| C2H9g10418 | 9:18,238,093-18,242,701 | - | C1H9g26500 | CX9g056668 | LOC_Os09g37280 | Os09g0544900 | - | Detail |
| C2H9g27785 | 9:18,244,799-18,247,362 | - | C1H9g30098 | CX9g057264 | LOC_Os09g37300 | Os09g0545000 | - | Detail |
| C2H9g03269 | 9:18,258,095-18,258,485 | + | C1H9g09109 | - | LOC_Os09g37344 | Os09g0545400 | - | Detail |
| C2H9g00395 | 9:18,262,020-18,262,294 | + | C1H9g11654 | - | LOC_Os09g37369 | Os09g0545700 | - | Detail |
| C2H9g01026 | 9:18,272,829-18,273,802 | + | - | - | - | - | - | Detail |
| C2H9g10946 | 9:18,281,655-18,282,071 | + | C1H9g18140 | - | LOC_Os09g37495 | Os09g0547033 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |