| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g07262 | 3:13,508,344-13,509,023 | - | C2H3g11438 | CX3g028361 | LOC_Os03g26490 | Os03g0381500 | - | Detail |
| C1H3g01880 | 3:13,605,373-13,611,010 | - | C2H3g10080 | CX3g027430 | LOC_Os03g26630 | Os03g0383800 | - | Detail |
| C1H3g04987 | 3:13,617,292-13,617,906 | + | C2H3g28106 | CX3g027286 | LOC_Os03g26650 | Os03g0383900 | - | Detail |
| C1H3g21136 | 3:13,620,841-13,623,028 | - | C2H3g10667 | CX3g031075 | LOC_Os03g24930 | Os03g0223000 | - | Detail |
| C1H3g05555 | 3:13,624,422-13,625,249 | - | - | - | - | - | - | Detail |
| C1H3g20814 | 3:13,625,890-13,626,646 | - | - | - | - | - | - | Detail |
| C1H3g24446 | 3:13,660,957-13,662,361 | - | C2H3g18257 | CX3g030150 | LOC_Os03g26680 | Os03g0333800 | - | Detail |
| C1H3g01567 | 3:13,666,763-13,670,088 | - | C2H3g23472 | - | LOC_Os03g26791 | Os03g0385301 | - | Detail |
| C1H3g30590 | 3:13,677,176-13,679,603 | + | C2H3g13722 | CX3g027750 | LOC_Os03g26820 | Os03g0385400 | - | Detail |
| C1H3g25255 | 3:13,693,867-13,695,084 | - | C2H3g05960 | CX3g028822 | LOC_Os03g26860 | Os03g0385900 | - | Detail |
| C1H3g24605 | 3:13,702,263-13,707,656 | + | C2H3g18357 | CX3g027474 | LOC_Os03g26870 | Os03g0386000 | SRWD5, SRWD5, OsWD40-73 | Detail |
| C1H3g14788 | 3:13,707,994-13,708,507 | - | C2H3g30684 | CX3g028061 | LOC_Os02g24750 | Os03g0562000 | - | Detail |
| C1H3g29954 | 3:13,711,216-13,713,080 | - | C2H3g21328 | CX3g026750 | - | - | - | Detail |
| C1H3g27294 | 3:13,773,336-13,775,764 | + | C2H3g25176 | CX3g027835 | LOC_Os03g26910 | Os03g0386500 | - | Detail |
| C1H3g19318 | 3:13,791,372-13,793,748 | + | C2H3g11441 | CX3g024963 | LOC_Os03g26920 | Os03g0386700 | - | Detail |
| C1H3g12347 | 3:13,796,459-13,799,501 | + | C2H3g16874 | CX3g024963 | LOC_Os03g26930 | Os03g0386800 | - | Detail |
| C1H3g29910 | 3:13,798,994-13,800,362 | - | - | - | - | - | - | Detail |
| C1H3g25240 | 3:13,809,874-13,819,234 | + | C2H3g12157 | CX3g030527 | LOC_Os03g26960 | Os03g0387000 | OsDNA2_2 | Detail |
| C1H3g24830 | 3:13,820,392-13,825,084 | + | C2H3g05360 | CX3g026325 | LOC_Os03g26970 | Os03g0387100 | TT1, OsPAB1, PAB1, OsTT1 | Detail |
| C1H3g11568 | 3:13,857,808-13,858,736 | + | - | CX3g026429 | - | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H7g16353 | 7:21,105,773-21,112,432 | - | C1H7g16765 | CX7g047394 | LOC_Os07g42924 | Os07g0621800 | - | Detail |
| C2H7g24152 | 7:21,124,779-21,129,007 | + | C1H7g01115 | CX7g047266 | LOC_Os07g42940 | Os07g0622000 | SAPK2, OsSAPK2 | Detail |
| C2H7g20443 | 7:21,129,779-21,132,212 | + | C1H7g20067 | CX7g047182 | LOC_Os07g42950 | Os07g0622100 | - | Detail |
| C2H7g13730 | 7:21,134,153-21,137,740 | - | C1H7g24644 | CX7g046408 | LOC_Os07g42960 | Os07g0622200 | OsDAHP1, DAHP1, DAHPS, OsDAHPS2, DAHPS2 | Detail |
| C2H7g23250 | 7:21,147,577-21,150,372 | + | C1H7g26701 | CX7g047953 | LOC_Os07g42970 | Os07g0486700 | - | Detail |
| C2H7g25922 | 7:21,166,216-21,169,576 | - | C1H7g17023 | CX7g048736 | LOC_Os07g42994 | Os07g0622700 | - | Detail |
| C2H7g22096 | 7:21,171,245-21,174,880 | - | C1H7g10136 | CX7g048859 | LOC_Os07g43010 | Os07g0622900 | DTM1 | Detail |
| C2H7g26895 | 7:21,185,727-21,193,031 | - | C1H7g06574 | CX7g047144 | LOC_Os07g43030 | Os07g0623100 | OsCAMTA3 | Detail |
| C2H7g27367 | 7:21,197,038-21,198,373 | + | C1H7g11901 | CX7g050228 | LOC_Os07g43040 | Os07g0623200 | - | Detail |
| C2H7g29892 | 7:21,199,933-21,204,089 | + | C1H7g16093 | CX7g048810 | LOC_Os07g43050 | Os07g0623300 | OsSC32 | Detail |
| C2H7g25401 | 7:21,204,716-21,207,301 | - | C1H7g26638 | CX7g049446 | LOC_Os07g43060 | Os07g0623400 | OsSPT4 | Detail |
| C2H7g12732 | 7:21,210,032-21,213,409 | - | C1H7g09940 | CX7g048435 | LOC_Os07g43070 | Os07g0623600 | - | Detail |
| C2H7g17300 | 7:21,257,862-21,261,521 | + | C1H7g30745 | CX7g049374 | LOC_Os07g43160 | Os07g0624600 | OsTPP3 | Detail |
| C2H7g24986 | 7:21,270,634-21,274,532 | - | C1H7g15776 | CX7g048993 | LOC_Os07g43170 | Os07g0624700 | - | Detail |
| C2H7g26070 | 7:21,276,571-21,277,167 | + | C1H7g10880 | CX7g046422 | LOC_Os07g43180 | Os07g0624900 | - | Detail |
| C2H7g26397 | 7:21,279,718-21,280,044 | + | C1H7g11048 | CX7g048631 | LOC_Os07g43200 | Os07g0625600 | - | Detail |
| C2H7g21180 | 7:21,280,364-21,280,689 | + | C1H7g11048 | - | LOC_Os07g43200 | - | - | Detail |
| C2H7g11215 | 7:21,289,213-21,289,785 | + | C1H7g12439 | CX7g048631 | LOC_Os07g43240 | Os07g0625400 | - | Detail |
| C2H7g22134 | 7:21,291,914-21,292,438 | + | C1H7g17159 | CX7g048631 | LOC_Os07g43250 | Os07g0625500 | - | Detail |
| C2H7g09123 | 7:21,294,744-21,295,343 | + | C1H7g18996 | CX7g046504 | LOC_Os07g43260 | Os07g0625600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |