| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g10609 | 3:13,084,893-13,085,765 | - | C2H3g00617 | CX3g030534 | LOC_Os03g25550 | Os03g0371800 | - | Detail |
| C1H3g16595 | 3:13,085,830-13,086,327 | - | C2H3g00617 | CX3g030534 | LOC_Os03g25550 | Os03g0371800 | - | Detail |
| C1H3g09237 | 3:13,125,177-13,133,800 | + | C2H3g13066 | CX3g030141 | LOC_Os03g25600 | Os03g0821300 | - | Detail |
| C1H3g20988 | 3:13,136,297-13,136,900 | - | C2H3g24461 | CX3g030815 | LOC_Os03g25610 | Os03g0372600 | - | Detail |
| C1H3g26671 | 3:13,139,232-13,142,571 | + | C2H3g09558 | CX3g025086 | LOC_Os03g25620 | Os03g0372700 | - | Detail |
| C1H3g02459 | 3:13,166,542-13,170,433 | - | C2H3g30423 | CX3g029031 | LOC_Os03g25720 | Os03g0374100 | - | Detail |
| C1H3g03430 | 3:13,174,979-13,178,588 | + | C2H3g09363 | CX3g025872 | LOC_Os03g25750 | Os03g0374400 | - | Detail |
| C1H3g29992 | 3:13,180,001-13,182,532 | - | C2H3g02420 | CX3g031135 | LOC_Os03g25760 | Os03g0374500 | OsIQM3 | Detail |
| C1H3g04281 | 3:13,193,090-13,195,387 | - | C2H3g06785 | CX3g028239 | LOC_Os03g25770 | Os03g0374575 | OsSCL26 | Detail |
| C1H3g12991 | 3:13,200,156-13,205,327 | + | C2H3g13807 | CX3g025908 | LOC_Os03g25790 | Os03g0374600 | - | Detail |
| C1H3g11329 | 3:13,211,637-13,212,344 | - | C2H3g07823 | CX3g031122 | LOC_Os03g25820 | Os03g0375900 | - | Detail |
| C1H3g18047 | 3:13,225,800-13,226,291 | - | C2H3g13273 | CX3g031122 | LOC_Os03g25820 | Os03g0375900 | - | Detail |
| C1H3g22864 | 3:13,232,497-13,233,498 | - | C2H3g09283 | CX3g031122 | LOC_Os03g25869 | Os03g0375300 | - | Detail |
| C1H3g05274 | 3:13,243,391-13,246,165 | - | C2H3g17665 | CX3g025557 | LOC_Os03g25920 | Os03g0375966 | - | Detail |
| C1H3g13157 | 3:13,251,260-13,254,412 | - | C2H3g22221 | CX3g028356 | LOC_Os03g25930 | Os03g0376000 | - | Detail |
| C1H3g30616 | 3:13,257,477-13,261,052 | - | C2H3g00210 | CX3g030420 | LOC_Os03g25940 | Os03g0376100 | - | Detail |
| C1H3g18959 | 3:13,268,397-13,270,478 | - | C2H3g30664 | CX3g029886 | LOC_Os03g25960 | Os03g0376600 | OsRRM2 | Detail |
| C1H3g09004 | 3:13,278,445-13,282,986 | - | C2H3g23850 | CX3g027038 | LOC_Os03g25970 | Os03g0376800 | - | Detail |
| C1H3g26655 | 3:13,284,368-13,289,138 | + | C2H3g09355 | CX3g029788 | LOC_Os03g25980 | Os03g0376900 | - | Detail |
| C1H3g07493 | 3:13,299,871-13,300,470 | + | C2H3g25053 | CX3g029933 | LOC_Os03g25990 | Os03g0377100 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g23287 | 9:18,074,497-18,078,205 | - | C1H9g18054 | CX9g058088 | LOC_Os09g37012 | Os09g0542100 | - | Detail |
| C2H9g00368 | 9:18,082,387-18,084,718 | - | C1H9g17541 | CX9g055142 | LOC_Os09g37020 | Os09g0542200 | - | Detail |
| C2H9g15798 | 9:18,092,302-18,095,972 | + | C1H9g09227 | CX9g057132 | LOC_Os09g37040 | Os09g0542500 | - | Detail |
| C2H9g05399 | 9:18,096,779-18,098,237 | - | C1H9g10374 | CX9g057153 | LOC_Os09g37050 | Os09g0542600 | - | Detail |
| C2H9g07462 | 9:18,101,890-18,104,578 | - | C1H9g10542 | CX9g057571 | LOC_Os09g37060 | Os09g0542700 | - | Detail |
| C2H9g24102 | 9:18,108,027-18,109,667 | - | C1H9g20729 | CX9g054989 | LOC_Os09g37070 | Os09g0542800 | - | Detail |
| C2H9g30539 | 9:18,128,798-18,134,856 | + | C1H9g02114 | CX9g055681 | LOC_Os09g37100 | Os09g0543100 | - | Detail |
| C2H9g20419 | 9:18,163,287-18,164,594 | + | C1H9g14882 | CX9g056310 | LOC_Os09g37180 | Os09g0543900 | - | Detail |
| C2H9g04352 | 9:18,174,377-18,175,741 | + | C1H9g22634 | CX9g056534 | LOC_Os09g37200 | Os09g0544000 | OsPHT4 | Detail |
| C2H9g00928 | 9:18,186,499-18,193,710 | + | C1H9g07690 | CX9g057415 | LOC_Os09g37230 | Os09g0544300 | - | Detail |
| C2H9g30661 | 9:18,194,984-18,216,082 | + | C1H9g17505 | CX9g057924 | LOC_Os09g37240 | Os09g0544400 | - | Detail |
| C2H9g00491 | 9:18,216,801-18,218,600 | - | C1H9g29018 | CX9g057891 | LOC_Os09g37250 | - | - | Detail |
| C2H9g14558 | 9:18,222,568-18,223,462 | - | C1H9g19143 | CX9g057635 | LOC_Os09g37260 | Os09g0544700 | - | Detail |
| C2H9g28839 | 9:18,223,898-18,227,681 | - | C1H9g28030 | CX9g057831 | LOC_Os09g37270 | Os09g0544800 | Os RopGEF7, OsRopGEF7, OsRacGEF2 | Detail |
| C2H9g10418 | 9:18,238,093-18,242,701 | - | C1H9g26500 | CX9g056668 | LOC_Os09g37280 | Os09g0544900 | - | Detail |
| C2H9g27785 | 9:18,244,799-18,247,362 | - | C1H9g30098 | CX9g057264 | LOC_Os09g37300 | Os09g0545000 | - | Detail |
| C2H9g03269 | 9:18,258,095-18,258,485 | + | C1H9g09109 | - | LOC_Os09g37344 | Os09g0545400 | - | Detail |
| C2H9g00395 | 9:18,262,020-18,262,294 | + | C1H9g11654 | - | LOC_Os09g37369 | Os09g0545700 | - | Detail |
| C2H9g01026 | 9:18,272,829-18,273,802 | + | - | - | - | - | - | Detail |
| C2H9g10946 | 9:18,281,655-18,282,071 | + | C1H9g18140 | - | LOC_Os09g37495 | Os09g0547033 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |